ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1H4S:T57:T56

Extra

PDB:
ATOM 1 O3' A A 56 -0.994 69.063 113.244 1.00 61.29 O
ATOM 2 P U A 57 -2.332 68.569 114.011 1.00 57.88 P
ATOM 3 OP1 U A 57 -3.009 69.759 114.590 1.00 54.21 O
ATOM 4 OP2 U A 57 -2.002 67.426 114.892 1.00 61.07 O
ATOM 5 O5' U A 57 -3.253 67.958 112.874 1.00 50.30 O
ATOM 6 C5' U A 57 -4.121 66.897 113.192 1.00 54.41 C
ATOM 7 C4' U A 57 -4.233 65.935 112.044 1.00 60.68 C
ATOM 8 O4' U A 57 -2.911 65.484 111.645 1.00 63.55 O
ATOM 9 C3' U A 57 -4.950 64.706 112.567 1.00 66.12 C
ATOM 10 O3' U A 57 -6.114 64.319 111.866 1.00 70.38 O
ATOM 11 C2' U A 57 -3.880 63.673 112.888 1.00 66.63 C
ATOM 12 O2' U A 57 -4.277 62.367 112.543 1.00 68.32 O
ATOM 13 C1' U A 57 -2.739 64.117 111.971 1.00 65.00 C
ATOM 14 N1 U A 57 -1.372 63.882 112.467 1.00 59.81 N
ATOM 15 C2 U A 57 -0.798 62.670 112.137 1.00 55.69 C
ATOM 16 O2 U A 57 -1.369 61.837 111.453 1.00 53.15 O
ATOM 17 N3 U A 57 0.468 62.468 112.629 1.00 54.74 N
ATOM 18 C4 U A 57 1.204 63.336 113.397 1.00 57.54 C
ATOM 19 O4 U A 57 2.326 63.000 113.774 1.00 58.98 O
ATOM 20 C5 U A 57 0.548 64.579 113.690 1.00 60.83 C
ATOM 21 C6 U A 57 -0.691 64.804 113.224 1.00 60.52 C
ATOM 22 P C A 58 -7.530 64.382 112.599 1.00 73.15 P
ATOM 23 OP1 C A 58 -8.440 63.447 111.886 1.00 73.78 O
ATOM 24 OP2 C A 58 -7.887 65.824 112.745 1.00 65.92 O
ATOM 25 O5' C A 58 -7.244 63.782 114.046 1.00 79.56 O
TER

ATOM 1 O3' G B 55 1.752 67.445 115.373 1.00 56.84 O
ATOM 2 P A B 56 2.971 68.284 114.784 1.00 58.04 P
ATOM 3 OP1 A B 56 3.942 67.316 114.215 1.00 51.67 O
ATOM 4 OP2 A B 56 3.409 69.277 115.796 1.00 60.40 O
ATOM 5 O5' A B 56 2.295 69.056 113.576 1.00 61.07 O
ATOM 6 C5' A B 56 2.127 68.412 112.329 1.00 61.37 C
ATOM 7 C4' A B 56 0.862 68.878 111.663 1.00 57.24 C
ATOM 8 O4' A B 56 0.939 68.479 110.278 1.00 57.64 O
ATOM 9 C3' A B 56 -0.445 68.280 112.181 1.00 60.21 C
ATOM 10 O3' A B 56 -0.994 69.063 113.244 1.00 61.29 O
ATOM 11 C2' A B 56 -1.338 68.365 110.953 1.00 63.10 C
ATOM 12 O2' A B 56 -1.893 69.654 110.796 1.00 72.12 O
ATOM 13 C1' A B 56 -0.342 68.099 109.822 1.00 63.41 C
ATOM 14 N9 A B 56 -0.275 66.705 109.386 1.00 61.76 N
ATOM 15 C8 A B 56 -1.137 66.037 108.544 1.00 66.19 C
ATOM 16 N7 A B 56 -0.825 64.774 108.360 1.00 61.05 N
ATOM 17 C5 A B 56 0.318 64.603 109.127 1.00 51.66 C
ATOM 18 C6 A B 56 1.129 63.492 109.357 1.00 50.39 C
ATOM 19 N6 A B 56 0.904 62.289 108.820 1.00 48.53 N
ATOM 20 N1 A B 56 2.196 63.655 110.171 1.00 53.84 N
ATOM 21 C2 A B 56 2.418 64.869 110.706 1.00 51.72 C
ATOM 22 N3 A B 56 1.724 65.989 110.564 1.00 41.73 N
ATOM 23 C4 A B 56 0.673 65.786 109.758 1.00 50.22 C
ATOM 24 P U B 57 -2.332 68.569 114.011 1.00 57.88 P
ATOM 25 OP1 U B 57 -3.009 69.759 114.590 1.00 54.21 O
ATOM 26 OP2 U B 57 -2.002 67.426 114.892 1.00 61.07 O
ATOM 27 O5' U B 57 -3.253 67.958 112.874 1.00 50.30 O
TER

Atoms:
C4: (1.204,63.336,113.397)
N3: (0.468,62.468,112.629)
OP1: (-3.009,69.759,114.590)
OP2: (-2.002,67.426,114.892)
C2: (-0.798,62.670,112.137)
C1': (-2.739,64.117,111.971)
C3': (-4.950,64.706,112.567)
O5': (-3.253,67.958,112.874)
O4': (-2.911,65.484,111.645)
C5': (-4.121,66.897,113.192)
P: (-2.332,68.569,114.011)
C4': (-4.233,65.935,112.044)
C2': (-3.880,63.673,112.888)
O2': (-4.277,62.367,112.543)
N1: (-1.372,63.882,112.467)
O4: (2.326,63.000,113.774)
O2: (-1.369,61.837,111.453)
C6: (-0.691,64.804,113.224)
C5: (0.548,64.579,113.690)
O3': (-6.114,64.319,111.866)
OP1: (3.942,67.316,114.215)
OP2: (3.409,69.277,115.796)
C3': (-0.445,68.280,112.181)
C1': (-0.342,68.099,109.822)
C5': (2.127,68.412,112.329)
O4': (0.939,68.479,110.278)
C8: (-1.137,66.037,108.544)
O2': (-1.893,69.654,110.796)
C6: (1.129,63.492,109.357)
C5: (0.318,64.603,109.127)
C4: (0.673,65.786,109.758)
P: (2.971,68.284,114.784)
C4': (0.862,68.878,111.663)
C2': (-1.338,68.365,110.953)
C2: (2.418,64.869,110.706)
N1: (2.196,63.655,110.171)
N3: (1.724,65.989,110.564)
N6: (0.904,62.289,108.820)
N7: (-0.825,64.774,108.360)
N9: (-0.275,66.705,109.386)
O5': (2.295,69.056,113.576)
O3': (-0.994,69.063,113.244)
Image (generated by PyMOL):
PyMOL image
show in jmol