ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3L3C:P47:P48

Extra

PDB:
ATOM 1 O3' G A 46 38.354 29.600 4.125 1.00 64.89 O
ATOM 2 P A A 47 38.978 28.982 2.796 1.00 66.46 P
ATOM 3 OP1 A A 47 40.146 28.165 3.200 1.00 66.67 O
ATOM 4 OP2 A A 47 39.145 30.061 1.794 1.00 66.35 O
ATOM 5 O5' A A 47 37.822 27.998 2.302 1.00 66.81 O
ATOM 6 C5' A A 47 37.266 27.020 3.175 1.00 67.49 C
ATOM 7 C4' A A 47 35.874 26.642 2.697 1.00 68.21 C
ATOM 8 O4' A A 47 35.034 27.820 2.588 1.00 67.38 O
ATOM 9 C3' A A 47 35.847 25.963 1.329 1.00 69.20 C
ATOM 10 O3' A A 47 34.935 24.871 1.347 1.00 72.18 O
ATOM 11 C2' A A 47 35.404 27.082 0.387 1.00 68.03 C
ATOM 12 O2' A A 47 34.714 26.619 -0.757 1.00 67.87 O
ATOM 13 C1' A A 47 34.485 27.905 1.288 1.00 66.78 C
ATOM 14 N9 A A 47 34.413 29.307 0.883 1.00 64.92 N
ATOM 15 C8 A A 47 35.466 30.160 0.693 1.00 64.40 C
ATOM 16 N7 A A 47 35.117 31.366 0.320 1.00 63.66 N
ATOM 17 C5 A A 47 33.739 31.300 0.262 1.00 63.29 C
ATOM 18 C6 A A 47 32.765 32.259 -0.076 1.00 63.00 C
ATOM 19 N6 A A 47 33.078 33.510 -0.421 1.00 63.12 N
ATOM 20 N1 A A 47 31.464 31.882 -0.041 1.00 62.65 N
ATOM 21 C2 A A 47 31.167 30.623 0.314 1.00 62.95 C
ATOM 22 N3 A A 47 32.000 29.633 0.650 1.00 63.30 N
ATOM 23 C4 A A 47 33.283 30.039 0.603 1.00 63.76 C
ATOM 24 P U A 48 35.448 23.398 1.715 1.00 74.71 P
ATOM 25 OP1 U A 48 35.742 23.354 3.165 1.00 74.67 O
ATOM 26 OP2 U A 48 36.501 23.019 0.744 1.00 74.50 O
ATOM 27 O5' U A 48 34.144 22.507 1.460 1.00 76.32 O
TER

ATOM 1 O3' A B 47 34.935 24.871 1.347 1.00 72.18 O
ATOM 2 P U B 48 35.448 23.398 1.715 1.00 74.71 P
ATOM 3 OP1 U B 48 35.742 23.354 3.165 1.00 74.67 O
ATOM 4 OP2 U B 48 36.501 23.019 0.744 1.00 74.50 O
ATOM 5 O5' U B 48 34.144 22.507 1.460 1.00 76.32 O
ATOM 6 C5' U B 48 32.868 22.966 1.885 1.00 79.30 C
ATOM 7 C4' U B 48 31.763 22.225 1.150 1.00 81.73 C
ATOM 8 O4' U B 48 32.184 20.873 0.830 1.00 82.79 O
ATOM 9 C3' U B 48 30.460 22.066 1.923 1.00 82.83 C
ATOM 10 O3' U B 48 29.354 22.132 1.016 1.00 83.40 O
ATOM 11 C2' U B 48 30.599 20.703 2.607 1.00 83.36 C
ATOM 12 O2' U B 48 29.359 20.038 2.762 1.00 83.40 O
ATOM 13 C1' U B 48 31.513 19.930 1.650 1.00 83.84 C
ATOM 14 N1 U B 48 32.566 19.072 2.307 1.00 84.83 N
ATOM 15 C2 U B 48 32.699 17.739 1.933 1.00 85.31 C
ATOM 16 O2 U B 48 32.000 17.190 1.095 1.00 85.18 O
ATOM 17 N3 U B 48 33.697 17.054 2.591 1.00 85.81 N
ATOM 18 C4 U B 48 34.558 17.554 3.557 1.00 86.02 C
ATOM 19 O4 U B 48 35.404 16.821 4.058 1.00 86.58 O
ATOM 20 C5 U B 48 34.365 18.944 3.889 1.00 85.72 C
ATOM 21 C6 U B 48 33.400 19.633 3.264 1.00 85.22 C
ATOM 22 P U B 49 28.526 23.498 0.863 1.00 84.17 P
ATOM 23 OP1 U B 49 27.178 23.170 0.336 1.00 83.76 O
ATOM 24 OP2 U B 49 29.384 24.471 0.142 1.00 83.71 O
ATOM 25 O5' U B 49 28.394 23.986 2.384 1.00 83.22 O
TER

Atoms:
OP1: (40.146,28.165,3.200)
OP2: (39.145,30.061,1.794)
C3': (35.847,25.963,1.329)
C1': (34.485,27.905,1.288)
C5': (37.266,27.020,3.175)
O4': (35.034,27.820,2.588)
C8: (35.466,30.160,0.693)
O2': (34.714,26.619,-0.757)
C6: (32.765,32.259,-0.076)
C5: (33.739,31.300,0.262)
C4: (33.283,30.039,0.603)
P: (38.978,28.982,2.796)
C4': (35.874,26.642,2.697)
C2': (35.404,27.082,0.387)
C2: (31.167,30.623,0.314)
N1: (31.464,31.882,-0.041)
N3: (32.000,29.633,0.650)
N6: (33.078,33.510,-0.421)
N7: (35.117,31.366,0.320)
N9: (34.413,29.307,0.883)
O5': (37.822,27.998,2.302)
O3': (34.935,24.871,1.347)
C4: (34.558,17.554,3.557)
N3: (33.697,17.054,2.591)
OP1: (35.742,23.354,3.165)
OP2: (36.501,23.019,0.744)
C2: (32.699,17.739,1.933)
C1': (31.513,19.930,1.650)
C3': (30.460,22.066,1.923)
O5': (34.144,22.507,1.460)
O4': (32.184,20.873,0.830)
C5': (32.868,22.966,1.885)
P: (35.448,23.398,1.715)
C4': (31.763,22.225,1.150)
C2': (30.599,20.703,2.607)
O2': (29.359,20.038,2.762)
N1: (32.566,19.072,2.307)
O4: (35.404,16.821,4.058)
O2: (32.000,17.190,1.095)
C6: (33.400,19.633,3.264)
C5: (34.365,18.944,3.889)
O3': (29.354,22.132,1.016)
Image (generated by PyMOL):
PyMOL image
show in jmol