Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A124:A633
Extra
PDB:
ATOM 1 O3' U A 123 -45.016 28.793 -62.228 1.00 34.31 O
ATOM 2 P G A 124 -43.740 28.770 -63.214 1.00 27.91 P
ATOM 3 OP1 G A 124 -43.809 29.998 -64.027 1.00 27.91 O
ATOM 4 OP2 G A 124 -43.732 27.455 -63.918 1.00 27.91 O
ATOM 5 O5' G A 124 -42.521 28.864 -62.196 1.00 27.91 O
ATOM 6 C5' G A 124 -42.314 30.041 -61.445 1.00 27.91 C
ATOM 7 C4' G A 124 -41.054 29.966 -60.640 1.00 27.91 C
ATOM 8 O4' G A 124 -41.171 28.926 -59.643 1.00 27.91 O
ATOM 9 C3' G A 124 -39.796 29.596 -61.403 1.00 27.91 C
ATOM 10 O3' G A 124 -39.244 30.680 -62.107 1.00 27.91 O
ATOM 11 C2' G A 124 -38.885 29.069 -60.307 1.00 27.91 C
ATOM 12 O2' G A 124 -38.244 30.135 -59.618 1.00 27.91 O
ATOM 13 C1' G A 124 -39.890 28.394 -59.366 1.00 27.91 C
ATOM 14 N9 G A 124 -39.913 26.936 -59.568 1.00 27.81 N
ATOM 15 C8 G A 124 -40.704 26.170 -60.378 1.00 27.81 C
ATOM 16 N7 G A 124 -40.388 24.908 -60.301 1.00 27.81 N
ATOM 17 C5 G A 124 -39.322 24.845 -59.400 1.00 27.81 C
ATOM 18 C6 G A 124 -38.536 23.762 -58.904 1.00 27.81 C
ATOM 19 O6 G A 124 -38.589 22.555 -59.140 1.00 27.81 O
ATOM 20 N1 G A 124 -37.568 24.183 -58.013 1.00 27.81 N
ATOM 21 C2 G A 124 -37.365 25.483 -57.632 1.00 27.81 C
ATOM 22 N2 G A 124 -36.374 25.705 -56.752 1.00 27.81 N
ATOM 23 N3 G A 124 -38.083 26.498 -58.081 1.00 27.81 N
ATOM 24 C4 G A 124 -39.029 26.101 -58.951 1.00 27.81 C
ATOM 25 P G A 125 -37.974 30.448 -63.052 1.00 44.43 P
ATOM 26 OP1 G A 125 -37.572 31.776 -63.585 1.00 44.43 O
ATOM 27 OP2 G A 125 -38.328 29.377 -64.005 1.00 44.43 O
ATOM 28 O5' G A 125 -36.879 29.917 -62.041 1.00 44.43 O
TER
ATOM 1 O3' C B 632 -41.856 32.853 -55.405 1.00 30.46 O
ATOM 2 P A B 633 -40.771 33.894 -54.824 1.00 43.42 P
ATOM 3 OP1 A B 633 -40.204 33.313 -53.572 1.00 43.42 O
ATOM 4 OP2 A B 633 -41.452 35.224 -54.744 1.00 43.42 O
ATOM 5 O5' A B 633 -39.653 33.902 -55.974 1.00 43.42 O
ATOM 6 C5' A B 633 -39.097 32.683 -56.448 1.00 43.42 C
ATOM 7 C4' A B 633 -38.437 32.836 -57.803 1.00 43.42 C
ATOM 8 O4' A B 633 -39.407 33.207 -58.815 1.00 43.42 O
ATOM 9 C3' A B 633 -37.389 33.913 -57.921 1.00 43.42 C
ATOM 10 O3' A B 633 -36.164 33.560 -57.322 1.00 43.42 O
ATOM 11 C2' A B 633 -37.307 34.106 -59.428 1.00 43.42 C
ATOM 12 O2' A B 633 -36.615 33.032 -60.043 1.00 43.42 O
ATOM 13 C1' A B 633 -38.772 33.996 -59.809 1.00 43.42 C
ATOM 14 N9 A B 633 -39.431 35.322 -59.887 1.00 43.08 N
ATOM 15 C8 A B 633 -40.276 35.954 -59.000 1.00 43.08 C
ATOM 16 N7 A B 633 -40.701 37.129 -59.408 1.00 43.08 N
ATOM 17 C5 A B 633 -40.099 37.295 -60.646 1.00 43.08 C
ATOM 18 C6 A B 633 -40.141 38.338 -61.593 1.00 43.08 C
ATOM 19 N6 A B 633 -40.837 39.467 -61.459 1.00 43.08 N
ATOM 20 N1 A B 633 -39.425 38.170 -62.718 1.00 43.08 N
ATOM 21 C2 A B 633 -38.719 37.044 -62.865 1.00 43.08 C
ATOM 22 N3 A B 633 -38.590 36.001 -62.054 1.00 43.08 N
ATOM 23 C4 A B 633 -39.318 36.191 -60.949 1.00 43.08 C
ATOM 24 P U B 634 -35.297 34.684 -56.586 1.00 34.87 P
ATOM 25 OP1 U B 634 -34.310 33.993 -55.720 1.00 34.87 O
ATOM 26 OP2 U B 634 -36.269 35.636 -55.965 1.00 34.87 O
ATOM 27 O5' U B 634 -34.540 35.382 -57.798 1.00 34.87 O
TER
ATOM 2 P G A 124 -43.740 28.770 -63.214 1.00 27.91 P
ATOM 3 OP1 G A 124 -43.809 29.998 -64.027 1.00 27.91 O
ATOM 4 OP2 G A 124 -43.732 27.455 -63.918 1.00 27.91 O
ATOM 5 O5' G A 124 -42.521 28.864 -62.196 1.00 27.91 O
ATOM 6 C5' G A 124 -42.314 30.041 -61.445 1.00 27.91 C
ATOM 7 C4' G A 124 -41.054 29.966 -60.640 1.00 27.91 C
ATOM 8 O4' G A 124 -41.171 28.926 -59.643 1.00 27.91 O
ATOM 9 C3' G A 124 -39.796 29.596 -61.403 1.00 27.91 C
ATOM 10 O3' G A 124 -39.244 30.680 -62.107 1.00 27.91 O
ATOM 11 C2' G A 124 -38.885 29.069 -60.307 1.00 27.91 C
ATOM 12 O2' G A 124 -38.244 30.135 -59.618 1.00 27.91 O
ATOM 13 C1' G A 124 -39.890 28.394 -59.366 1.00 27.91 C
ATOM 14 N9 G A 124 -39.913 26.936 -59.568 1.00 27.81 N
ATOM 15 C8 G A 124 -40.704 26.170 -60.378 1.00 27.81 C
ATOM 16 N7 G A 124 -40.388 24.908 -60.301 1.00 27.81 N
ATOM 17 C5 G A 124 -39.322 24.845 -59.400 1.00 27.81 C
ATOM 18 C6 G A 124 -38.536 23.762 -58.904 1.00 27.81 C
ATOM 19 O6 G A 124 -38.589 22.555 -59.140 1.00 27.81 O
ATOM 20 N1 G A 124 -37.568 24.183 -58.013 1.00 27.81 N
ATOM 21 C2 G A 124 -37.365 25.483 -57.632 1.00 27.81 C
ATOM 22 N2 G A 124 -36.374 25.705 -56.752 1.00 27.81 N
ATOM 23 N3 G A 124 -38.083 26.498 -58.081 1.00 27.81 N
ATOM 24 C4 G A 124 -39.029 26.101 -58.951 1.00 27.81 C
ATOM 25 P G A 125 -37.974 30.448 -63.052 1.00 44.43 P
ATOM 26 OP1 G A 125 -37.572 31.776 -63.585 1.00 44.43 O
ATOM 27 OP2 G A 125 -38.328 29.377 -64.005 1.00 44.43 O
ATOM 28 O5' G A 125 -36.879 29.917 -62.041 1.00 44.43 O
TER
ATOM 1 O3' C B 632 -41.856 32.853 -55.405 1.00 30.46 O
ATOM 2 P A B 633 -40.771 33.894 -54.824 1.00 43.42 P
ATOM 3 OP1 A B 633 -40.204 33.313 -53.572 1.00 43.42 O
ATOM 4 OP2 A B 633 -41.452 35.224 -54.744 1.00 43.42 O
ATOM 5 O5' A B 633 -39.653 33.902 -55.974 1.00 43.42 O
ATOM 6 C5' A B 633 -39.097 32.683 -56.448 1.00 43.42 C
ATOM 7 C4' A B 633 -38.437 32.836 -57.803 1.00 43.42 C
ATOM 8 O4' A B 633 -39.407 33.207 -58.815 1.00 43.42 O
ATOM 9 C3' A B 633 -37.389 33.913 -57.921 1.00 43.42 C
ATOM 10 O3' A B 633 -36.164 33.560 -57.322 1.00 43.42 O
ATOM 11 C2' A B 633 -37.307 34.106 -59.428 1.00 43.42 C
ATOM 12 O2' A B 633 -36.615 33.032 -60.043 1.00 43.42 O
ATOM 13 C1' A B 633 -38.772 33.996 -59.809 1.00 43.42 C
ATOM 14 N9 A B 633 -39.431 35.322 -59.887 1.00 43.08 N
ATOM 15 C8 A B 633 -40.276 35.954 -59.000 1.00 43.08 C
ATOM 16 N7 A B 633 -40.701 37.129 -59.408 1.00 43.08 N
ATOM 17 C5 A B 633 -40.099 37.295 -60.646 1.00 43.08 C
ATOM 18 C6 A B 633 -40.141 38.338 -61.593 1.00 43.08 C
ATOM 19 N6 A B 633 -40.837 39.467 -61.459 1.00 43.08 N
ATOM 20 N1 A B 633 -39.425 38.170 -62.718 1.00 43.08 N
ATOM 21 C2 A B 633 -38.719 37.044 -62.865 1.00 43.08 C
ATOM 22 N3 A B 633 -38.590 36.001 -62.054 1.00 43.08 N
ATOM 23 C4 A B 633 -39.318 36.191 -60.949 1.00 43.08 C
ATOM 24 P U B 634 -35.297 34.684 -56.586 1.00 34.87 P
ATOM 25 OP1 U B 634 -34.310 33.993 -55.720 1.00 34.87 O
ATOM 26 OP2 U B 634 -36.269 35.636 -55.965 1.00 34.87 O
ATOM 27 O5' U B 634 -34.540 35.382 -57.798 1.00 34.87 O
TER
Atoms:
OP1: (-43.809,29.998,-64.027)
OP2: (-43.732,27.455,-63.918)
C3': (-39.796,29.596,-61.403)
C1': (-39.890,28.394,-59.366)
C5': (-42.314,30.041,-61.445)
O6: (-38.589,22.555,-59.140)
O4': (-41.171,28.926,-59.643)
C8: (-40.704,26.170,-60.378)
C2: (-37.365,25.483,-57.632)
C6: (-38.536,23.762,-58.904)
C5: (-39.322,24.845,-59.400)
C4: (-39.029,26.101,-58.951)
P: (-43.740,28.770,-63.214)
C4': (-41.054,29.966,-60.640)
C2': (-38.885,29.069,-60.307)
O2': (-38.244,30.135,-59.618)
N1: (-37.568,24.183,-58.013)
N2: (-36.374,25.705,-56.752)
N3: (-38.083,26.498,-58.081)
N7: (-40.388,24.908,-60.301)
N9: (-39.913,26.936,-59.568)
O5': (-42.521,28.864,-62.196)
O3': (-39.244,30.680,-62.107)
OP2: (-43.732,27.455,-63.918)
C3': (-39.796,29.596,-61.403)
C1': (-39.890,28.394,-59.366)
C5': (-42.314,30.041,-61.445)
O6: (-38.589,22.555,-59.140)
O4': (-41.171,28.926,-59.643)
C8: (-40.704,26.170,-60.378)
C2: (-37.365,25.483,-57.632)
C6: (-38.536,23.762,-58.904)
C5: (-39.322,24.845,-59.400)
C4: (-39.029,26.101,-58.951)
P: (-43.740,28.770,-63.214)
C4': (-41.054,29.966,-60.640)
C2': (-38.885,29.069,-60.307)
O2': (-38.244,30.135,-59.618)
N1: (-37.568,24.183,-58.013)
N2: (-36.374,25.705,-56.752)
N3: (-38.083,26.498,-58.081)
N7: (-40.388,24.908,-60.301)
N9: (-39.913,26.936,-59.568)
O5': (-42.521,28.864,-62.196)
O3': (-39.244,30.680,-62.107)
OP1: (-40.204,33.313,-53.572)
OP2: (-41.452,35.224,-54.744)
C3': (-37.389,33.913,-57.921)
C1': (-38.772,33.996,-59.809)
C5': (-39.097,32.683,-56.448)
O4': (-39.407,33.207,-58.815)
C8: (-40.276,35.954,-59.000)
O2': (-36.615,33.032,-60.043)
C6: (-40.141,38.338,-61.593)
C5: (-40.099,37.295,-60.646)
C4: (-39.318,36.191,-60.949)
P: (-40.771,33.894,-54.824)
C4': (-38.437,32.836,-57.803)
C2': (-37.307,34.106,-59.428)
C2: (-38.719,37.044,-62.865)
N1: (-39.425,38.170,-62.718)
N3: (-38.590,36.001,-62.054)
N6: (-40.837,39.467,-61.459)
N7: (-40.701,37.129,-59.408)
N9: (-39.431,35.322,-59.887)
O5': (-39.653,33.902,-55.974)
O3': (-36.164,33.560,-57.322)
OP2: (-41.452,35.224,-54.744)
C3': (-37.389,33.913,-57.921)
C1': (-38.772,33.996,-59.809)
C5': (-39.097,32.683,-56.448)
O4': (-39.407,33.207,-58.815)
C8: (-40.276,35.954,-59.000)
O2': (-36.615,33.032,-60.043)
C6: (-40.141,38.338,-61.593)
C5: (-40.099,37.295,-60.646)
C4: (-39.318,36.191,-60.949)
P: (-40.771,33.894,-54.824)
C4': (-38.437,32.836,-57.803)
C2': (-37.307,34.106,-59.428)
C2: (-38.719,37.044,-62.865)
N1: (-39.425,38.170,-62.718)
N3: (-38.590,36.001,-62.054)
N6: (-40.837,39.467,-61.459)
N7: (-40.701,37.129,-59.408)
N9: (-39.431,35.322,-59.887)
O5': (-39.653,33.902,-55.974)
O3': (-36.164,33.560,-57.322)
Image (generated by PyMOL):