ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A644:A705

Extra

PDB:
ATOM 1 O3' A A 643 -56.523 38.745 13.875 1.00 16.25 O
ATOM 2 P G A 644 -55.919 39.225 12.477 1.00 12.61 P
ATOM 3 OP1 G A 644 -54.599 39.846 12.751 1.00 21.61 O
ATOM 4 OP2 G A 644 -56.978 39.990 11.749 1.00 21.19 O
ATOM 5 O5' G A 644 -55.657 37.896 11.662 1.00 13.84 O
ATOM 6 C5' G A 644 -56.559 37.503 10.631 1.00 13.84 C
ATOM 7 C4' G A 644 -55.845 36.635 9.638 1.00 13.84 C
ATOM 8 O4' G A 644 -54.654 37.335 9.187 1.00 13.84 O
ATOM 9 C3' G A 644 -55.305 35.320 10.170 1.00 13.84 C
ATOM 10 O3' G A 644 -56.299 34.302 10.259 1.00 13.84 O
ATOM 11 C2' G A 644 -54.191 35.011 9.179 1.00 13.84 C
ATOM 12 O2' G A 644 -54.657 34.465 7.959 1.00 14.73 O
ATOM 13 C1' G A 644 -53.632 36.404 8.911 1.00 13.84 C
ATOM 14 N9 G A 644 -52.528 36.679 9.809 1.00 19.82 N
ATOM 15 C8 G A 644 -52.481 37.618 10.808 1.00 21.14 C
ATOM 16 N7 G A 644 -51.351 37.609 11.462 1.00 21.52 N
ATOM 17 C5 G A 644 -50.614 36.605 10.851 1.00 20.22 C
ATOM 18 C6 G A 644 -49.321 36.126 11.132 1.00 20.27 C
ATOM 19 O6 G A 644 -48.528 36.517 11.999 1.00 21.49 O
ATOM 20 N1 G A 644 -48.970 35.079 10.287 1.00 19.66 N
ATOM 21 C2 G A 644 -49.767 34.561 9.305 1.00 20.51 C
ATOM 22 N2 G A 644 -49.262 33.524 8.636 1.00 21.01 N
ATOM 23 N3 G A 644 -50.970 35.015 9.016 1.00 21.57 N
ATOM 24 C4 G A 644 -51.329 36.027 9.827 1.00 20.11 C
ATOM 25 P G A 645 -56.190 33.196 11.422 1.00 29.26 P
ATOM 26 OP1 G A 645 -57.366 32.298 11.269 1.00 29.14 O
ATOM 27 OP2 G A 645 -55.942 33.862 12.727 1.00 26.40 O
ATOM 28 O5' G A 645 -54.868 32.398 11.040 1.00 10.75 O
TER

ATOM 1 O3' C B 704 -54.380 42.061 6.334 1.00 22.69 O
ATOM 2 P G B 705 -54.292 41.851 4.761 1.00 13.22 P
ATOM 3 OP1 G B 705 -52.889 42.025 4.288 1.00 15.06 O
ATOM 4 OP2 G B 705 -55.393 42.664 4.175 1.00 13.02 O
ATOM 5 O5' G B 705 -54.713 40.329 4.561 1.00 30.06 O
ATOM 6 C5' G B 705 -53.881 39.264 5.068 1.00 29.15 C
ATOM 7 C4' G B 705 -54.412 37.910 4.636 1.00 28.88 C
ATOM 8 O4' G B 705 -55.625 37.573 5.356 1.00 28.88 O
ATOM 9 C3' G B 705 -54.785 37.746 3.174 1.00 29.65 C
ATOM 10 O3' G B 705 -53.640 37.508 2.377 1.00 31.60 O
ATOM 11 C2' G B 705 -55.719 36.547 3.213 1.00 28.77 C
ATOM 12 O2' G B 705 -55.019 35.326 3.273 1.00 30.49 O
ATOM 13 C1' G B 705 -56.431 36.742 4.552 1.00 27.85 C
ATOM 14 N9 G B 705 -57.717 37.390 4.366 1.00 29.60 N
ATOM 15 C8 G B 705 -57.974 38.736 4.344 1.00 28.39 C
ATOM 16 N7 G B 705 -59.218 39.014 4.066 1.00 27.45 N
ATOM 17 C5 G B 705 -59.818 37.775 3.912 1.00 27.37 C
ATOM 18 C6 G B 705 -61.143 37.440 3.584 1.00 25.17 C
ATOM 19 O6 G B 705 -62.087 38.192 3.343 1.00 26.99 O
ATOM 20 N1 G B 705 -61.327 36.067 3.540 1.00 24.34 N
ATOM 21 C2 G B 705 -60.362 35.136 3.778 1.00 25.62 C
ATOM 22 N2 G B 705 -60.753 33.873 3.697 1.00 26.31 N
ATOM 23 N3 G B 705 -59.113 35.428 4.075 1.00 26.47 N
ATOM 24 C4 G B 705 -58.911 36.762 4.122 1.00 27.84 C
ATOM 25 P A B 706 -53.527 38.210 0.947 1.00 46.36 P
ATOM 26 OP1 A B 706 -52.200 37.863 0.379 1.00 54.83 O
ATOM 27 OP2 A B 706 -53.910 39.632 1.093 1.00 52.22 O
ATOM 28 O5' A B 706 -54.686 37.525 0.095 1.00 16.13 O
TER

Atoms:
OP1: (-54.599,39.846,12.751)
OP2: (-56.978,39.990,11.749)
C3': (-55.305,35.320,10.170)
C1': (-53.632,36.404,8.911)
C5': (-56.559,37.503,10.631)
O6: (-48.528,36.517,11.999)
O4': (-54.654,37.335,9.187)
C8: (-52.481,37.618,10.808)
C2: (-49.767,34.561,9.305)
C6: (-49.321,36.126,11.132)
C5: (-50.614,36.605,10.851)
C4: (-51.329,36.027,9.827)
P: (-55.919,39.225,12.477)
C4': (-55.845,36.635,9.638)
C2': (-54.191,35.011,9.179)
O2': (-54.657,34.465,7.959)
N1: (-48.970,35.079,10.287)
N2: (-49.262,33.524,8.636)
N3: (-50.970,35.015,9.016)
N7: (-51.351,37.609,11.462)
N9: (-52.528,36.679,9.809)
O5': (-55.657,37.896,11.662)
O3': (-56.299,34.302,10.259)
OP1: (-52.889,42.025,4.288)
OP2: (-55.393,42.664,4.175)
C3': (-54.785,37.746,3.174)
C1': (-56.431,36.742,4.552)
C5': (-53.881,39.264,5.068)
O6: (-62.087,38.192,3.343)
O4': (-55.625,37.573,5.356)
C8: (-57.974,38.736,4.344)
C2: (-60.362,35.136,3.778)
C6: (-61.143,37.440,3.584)
C5: (-59.818,37.775,3.912)
C4: (-58.911,36.762,4.122)
P: (-54.292,41.851,4.761)
C4': (-54.412,37.910,4.636)
C2': (-55.719,36.547,3.213)
O2': (-55.019,35.326,3.273)
N1: (-61.327,36.067,3.540)
N2: (-60.753,33.873,3.697)
N3: (-59.113,35.428,4.075)
N7: (-59.218,39.014,4.066)
N9: (-57.717,37.390,4.366)
O5': (-54.713,40.329,4.561)
O3': (-53.640,37.508,2.377)
Image (generated by PyMOL):
PyMOL image
show in jmol