Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1247:A1246
Extra
PDB:
ATOM 1 O3' A A1246 16.355 85.716 91.375 1.00 43.70 O
ATOM 2 P U A1247 17.053 86.112 89.987 1.00 43.94 P
ATOM 3 OP1 U A1247 18.076 87.144 90.294 1.00 44.56 O
ATOM 4 OP2 U A1247 15.995 86.410 88.995 1.00 42.74 O
ATOM 5 O5' U A1247 17.793 84.772 89.534 1.00 43.48 O
ATOM 6 C5' U A1247 19.064 84.418 90.101 1.00 41.71 C
ATOM 7 C4' U A1247 19.518 83.060 89.619 1.00 42.71 C
ATOM 8 O4' U A1247 18.503 82.074 89.949 1.00 42.68 O
ATOM 9 C3' U A1247 19.714 82.870 88.125 1.00 42.91 C
ATOM 10 O3' U A1247 20.958 83.387 87.655 1.00 45.90 O
ATOM 11 C2' U A1247 19.631 81.353 88.007 1.00 42.08 C
ATOM 12 O2' U A1247 20.773 80.722 88.536 1.00 41.86 O
ATOM 13 C1' U A1247 18.470 81.057 88.953 1.00 41.28 C
ATOM 14 N1 U A1247 17.161 81.126 88.282 1.00 39.82 N
ATOM 15 C2 U A1247 16.796 80.094 87.437 1.00 38.46 C
ATOM 16 O2 U A1247 17.518 79.152 87.172 1.00 37.88 O
ATOM 17 N3 U A1247 15.539 80.211 86.901 1.00 39.63 N
ATOM 18 C4 U A1247 14.619 81.229 87.116 1.00 40.40 C
ATOM 19 O4 U A1247 13.438 81.050 86.807 1.00 40.52 O
ATOM 20 C5 U A1247 15.096 82.281 87.954 1.00 40.19 C
ATOM 21 C6 U A1247 16.312 82.197 88.498 1.00 39.29 C
ATOM 22 P C A1248 20.975 84.442 86.429 1.00 47.25 P
ATOM 23 OP1 C A1248 19.897 83.963 85.530 1.00 46.07 O
ATOM 24 OP2 C A1248 22.347 84.574 85.894 1.00 46.68 O
ATOM 25 O5' C A1248 20.618 85.837 87.130 1.00 46.40 O
TER
ATOM 1 O3' A B1245 13.171 85.103 87.915 1.00 43.38 O
ATOM 2 P A B1246 12.004 85.476 88.940 1.00 43.78 P
ATOM 3 OP1 A B1246 10.877 84.605 88.569 1.00 46.97 O
ATOM 4 OP2 A B1246 11.816 86.947 88.937 1.00 43.61 O
ATOM 5 O5' A B1246 12.564 84.940 90.335 1.00 44.04 O
ATOM 6 C5' A B1246 13.130 85.819 91.342 1.00 44.20 C
ATOM 7 C4' A B1246 14.152 85.066 92.165 1.00 44.06 C
ATOM 8 O4' A B1246 13.566 83.794 92.559 1.00 43.61 O
ATOM 9 C3' A B1246 15.403 84.662 91.403 1.00 45.00 C
ATOM 10 O3' A B1246 16.355 85.716 91.375 1.00 43.70 O
ATOM 11 C2' A B1246 15.882 83.432 92.166 1.00 45.46 C
ATOM 12 O2' A B1246 16.567 83.733 93.373 1.00 47.63 O
ATOM 13 C1' A B1246 14.548 82.766 92.504 1.00 43.70 C
ATOM 14 N9 A B1246 14.109 81.780 91.517 1.00 41.13 N
ATOM 15 C8 A B1246 12.967 81.855 90.769 1.00 41.10 C
ATOM 16 N7 A B1246 12.787 80.836 89.967 1.00 40.80 N
ATOM 17 C5 A B1246 13.887 80.031 90.202 1.00 40.07 C
ATOM 18 C6 A B1246 14.284 78.803 89.652 1.00 41.31 C
ATOM 19 N6 A B1246 13.565 78.138 88.738 1.00 43.62 N
ATOM 20 N1 A B1246 15.453 78.274 90.076 1.00 40.95 N
ATOM 21 C2 A B1246 16.159 78.944 90.997 1.00 39.97 C
ATOM 22 N3 A B1246 15.883 80.105 91.598 1.00 39.80 N
ATOM 23 C4 A B1246 14.720 80.604 91.149 1.00 40.42 C
ATOM 24 P U B1247 17.053 86.112 89.987 1.00 43.94 P
ATOM 25 OP1 U B1247 18.076 87.144 90.294 1.00 44.56 O
ATOM 26 OP2 U B1247 15.995 86.410 88.995 1.00 42.74 O
ATOM 27 O5' U B1247 17.793 84.772 89.534 1.00 43.48 O
TER
ATOM 2 P U A1247 17.053 86.112 89.987 1.00 43.94 P
ATOM 3 OP1 U A1247 18.076 87.144 90.294 1.00 44.56 O
ATOM 4 OP2 U A1247 15.995 86.410 88.995 1.00 42.74 O
ATOM 5 O5' U A1247 17.793 84.772 89.534 1.00 43.48 O
ATOM 6 C5' U A1247 19.064 84.418 90.101 1.00 41.71 C
ATOM 7 C4' U A1247 19.518 83.060 89.619 1.00 42.71 C
ATOM 8 O4' U A1247 18.503 82.074 89.949 1.00 42.68 O
ATOM 9 C3' U A1247 19.714 82.870 88.125 1.00 42.91 C
ATOM 10 O3' U A1247 20.958 83.387 87.655 1.00 45.90 O
ATOM 11 C2' U A1247 19.631 81.353 88.007 1.00 42.08 C
ATOM 12 O2' U A1247 20.773 80.722 88.536 1.00 41.86 O
ATOM 13 C1' U A1247 18.470 81.057 88.953 1.00 41.28 C
ATOM 14 N1 U A1247 17.161 81.126 88.282 1.00 39.82 N
ATOM 15 C2 U A1247 16.796 80.094 87.437 1.00 38.46 C
ATOM 16 O2 U A1247 17.518 79.152 87.172 1.00 37.88 O
ATOM 17 N3 U A1247 15.539 80.211 86.901 1.00 39.63 N
ATOM 18 C4 U A1247 14.619 81.229 87.116 1.00 40.40 C
ATOM 19 O4 U A1247 13.438 81.050 86.807 1.00 40.52 O
ATOM 20 C5 U A1247 15.096 82.281 87.954 1.00 40.19 C
ATOM 21 C6 U A1247 16.312 82.197 88.498 1.00 39.29 C
ATOM 22 P C A1248 20.975 84.442 86.429 1.00 47.25 P
ATOM 23 OP1 C A1248 19.897 83.963 85.530 1.00 46.07 O
ATOM 24 OP2 C A1248 22.347 84.574 85.894 1.00 46.68 O
ATOM 25 O5' C A1248 20.618 85.837 87.130 1.00 46.40 O
TER
ATOM 1 O3' A B1245 13.171 85.103 87.915 1.00 43.38 O
ATOM 2 P A B1246 12.004 85.476 88.940 1.00 43.78 P
ATOM 3 OP1 A B1246 10.877 84.605 88.569 1.00 46.97 O
ATOM 4 OP2 A B1246 11.816 86.947 88.937 1.00 43.61 O
ATOM 5 O5' A B1246 12.564 84.940 90.335 1.00 44.04 O
ATOM 6 C5' A B1246 13.130 85.819 91.342 1.00 44.20 C
ATOM 7 C4' A B1246 14.152 85.066 92.165 1.00 44.06 C
ATOM 8 O4' A B1246 13.566 83.794 92.559 1.00 43.61 O
ATOM 9 C3' A B1246 15.403 84.662 91.403 1.00 45.00 C
ATOM 10 O3' A B1246 16.355 85.716 91.375 1.00 43.70 O
ATOM 11 C2' A B1246 15.882 83.432 92.166 1.00 45.46 C
ATOM 12 O2' A B1246 16.567 83.733 93.373 1.00 47.63 O
ATOM 13 C1' A B1246 14.548 82.766 92.504 1.00 43.70 C
ATOM 14 N9 A B1246 14.109 81.780 91.517 1.00 41.13 N
ATOM 15 C8 A B1246 12.967 81.855 90.769 1.00 41.10 C
ATOM 16 N7 A B1246 12.787 80.836 89.967 1.00 40.80 N
ATOM 17 C5 A B1246 13.887 80.031 90.202 1.00 40.07 C
ATOM 18 C6 A B1246 14.284 78.803 89.652 1.00 41.31 C
ATOM 19 N6 A B1246 13.565 78.138 88.738 1.00 43.62 N
ATOM 20 N1 A B1246 15.453 78.274 90.076 1.00 40.95 N
ATOM 21 C2 A B1246 16.159 78.944 90.997 1.00 39.97 C
ATOM 22 N3 A B1246 15.883 80.105 91.598 1.00 39.80 N
ATOM 23 C4 A B1246 14.720 80.604 91.149 1.00 40.42 C
ATOM 24 P U B1247 17.053 86.112 89.987 1.00 43.94 P
ATOM 25 OP1 U B1247 18.076 87.144 90.294 1.00 44.56 O
ATOM 26 OP2 U B1247 15.995 86.410 88.995 1.00 42.74 O
ATOM 27 O5' U B1247 17.793 84.772 89.534 1.00 43.48 O
TER
Atoms:
C4: (14.619,81.229,87.116)
N3: (15.539,80.211,86.901)
OP1: (18.076,87.144,90.294)
OP2: (15.995,86.410,88.995)
C2: (16.796,80.094,87.437)
C1': (18.470,81.057,88.953)
C3': (19.714,82.870,88.125)
O5': (17.793,84.772,89.534)
O4': (18.503,82.074,89.949)
C5': (19.064,84.418,90.101)
P: (17.053,86.112,89.987)
C4': (19.518,83.060,89.619)
C2': (19.631,81.353,88.007)
O2': (20.773,80.722,88.536)
N1: (17.161,81.126,88.282)
O4: (13.438,81.050,86.807)
O2: (17.518,79.152,87.172)
C6: (16.312,82.197,88.498)
C5: (15.096,82.281,87.954)
O3': (20.958,83.387,87.655)
N3: (15.539,80.211,86.901)
OP1: (18.076,87.144,90.294)
OP2: (15.995,86.410,88.995)
C2: (16.796,80.094,87.437)
C1': (18.470,81.057,88.953)
C3': (19.714,82.870,88.125)
O5': (17.793,84.772,89.534)
O4': (18.503,82.074,89.949)
C5': (19.064,84.418,90.101)
P: (17.053,86.112,89.987)
C4': (19.518,83.060,89.619)
C2': (19.631,81.353,88.007)
O2': (20.773,80.722,88.536)
N1: (17.161,81.126,88.282)
O4: (13.438,81.050,86.807)
O2: (17.518,79.152,87.172)
C6: (16.312,82.197,88.498)
C5: (15.096,82.281,87.954)
O3': (20.958,83.387,87.655)
OP1: (10.877,84.605,88.569)
OP2: (11.816,86.947,88.937)
C3': (15.403,84.662,91.403)
C1': (14.548,82.766,92.504)
C5': (13.130,85.819,91.342)
O4': (13.566,83.794,92.559)
C8: (12.967,81.855,90.769)
O2': (16.567,83.733,93.373)
C6: (14.284,78.803,89.652)
C5: (13.887,80.031,90.202)
C4: (14.720,80.604,91.149)
P: (12.004,85.476,88.940)
C4': (14.152,85.066,92.165)
C2': (15.882,83.432,92.166)
C2: (16.159,78.944,90.997)
N1: (15.453,78.274,90.076)
N3: (15.883,80.105,91.598)
N6: (13.565,78.138,88.738)
N7: (12.787,80.836,89.967)
N9: (14.109,81.780,91.517)
O5': (12.564,84.940,90.335)
O3': (16.355,85.716,91.375)
OP2: (11.816,86.947,88.937)
C3': (15.403,84.662,91.403)
C1': (14.548,82.766,92.504)
C5': (13.130,85.819,91.342)
O4': (13.566,83.794,92.559)
C8: (12.967,81.855,90.769)
O2': (16.567,83.733,93.373)
C6: (14.284,78.803,89.652)
C5: (13.887,80.031,90.202)
C4: (14.720,80.604,91.149)
P: (12.004,85.476,88.940)
C4': (14.152,85.066,92.165)
C2': (15.882,83.432,92.166)
C2: (16.159,78.944,90.997)
N1: (15.453,78.274,90.076)
N3: (15.883,80.105,91.598)
N6: (13.565,78.138,88.738)
N7: (12.787,80.836,89.967)
N9: (14.109,81.780,91.517)
O5': (12.564,84.940,90.335)
O3': (16.355,85.716,91.375)
Image (generated by PyMOL):