ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A644:A705

Extra

PDB:
ATOM 1 O3' A A 643 168.697 113.735 -61.014 1.00 34.06 O
ATOM 2 P G A 644 167.241 114.051 -60.404 1.00 33.78 P
ATOM 3 OP1 G A 644 166.380 114.503 -61.548 1.00 33.70 O
ATOM 4 OP2 G A 644 167.369 114.909 -59.190 1.00 33.77 O
ATOM 5 O5' G A 644 166.730 112.637 -59.948 1.00 31.84 O
ATOM 6 C5' G A 644 167.020 112.142 -58.640 1.00 31.09 C
ATOM 7 C4' G A 644 166.141 110.963 -58.336 1.00 31.22 C
ATOM 8 O4' G A 644 164.760 111.362 -58.543 1.00 30.25 O
ATOM 9 C3' G A 644 166.297 109.756 -59.243 1.00 32.31 C
ATOM 10 O3' G A 644 167.375 108.908 -58.895 1.00 33.30 O
ATOM 11 C2' G A 644 164.952 109.073 -59.080 1.00 32.44 C
ATOM 12 O2' G A 644 164.882 108.396 -57.837 1.00 34.86 O
ATOM 13 C1' G A 644 164.010 110.272 -59.046 1.00 31.27 C
ATOM 14 N9 G A 644 163.546 110.610 -60.390 1.00 31.36 N
ATOM 15 C8 G A 644 163.796 111.766 -61.090 1.00 32.75 C
ATOM 16 N7 G A 644 163.316 111.744 -62.303 1.00 32.67 N
ATOM 17 C5 G A 644 162.700 110.504 -62.406 1.00 31.64 C
ATOM 18 C6 G A 644 162.031 109.897 -63.502 1.00 31.62 C
ATOM 19 O6 G A 644 161.855 110.345 -64.642 1.00 33.46 O
ATOM 20 N1 G A 644 161.549 108.639 -63.175 1.00 30.73 N
ATOM 21 C2 G A 644 161.690 108.036 -61.955 1.00 32.33 C
ATOM 22 N2 G A 644 161.133 106.825 -61.829 1.00 32.76 N
ATOM 23 N3 G A 644 162.326 108.581 -60.930 1.00 33.05 N
ATOM 24 C4 G A 644 162.805 109.806 -61.226 1.00 31.40 C
ATOM 25 P G A 645 168.136 108.089 -60.062 1.00 34.53 P
ATOM 26 OP1 G A 645 169.336 107.444 -59.443 1.00 34.91 O
ATOM 27 OP2 G A 645 168.300 108.981 -61.252 1.00 31.16 O
ATOM 28 O5' G A 645 167.119 106.940 -60.460 1.00 33.92 O
TER

ATOM 1 O3' C B 704 161.772 115.369 -56.130 1.00 34.18 O
ATOM 2 P G B 705 160.861 114.980 -54.858 1.00 34.75 P
ATOM 3 OP1 G B 705 159.433 114.983 -55.335 1.00 34.64 O
ATOM 4 OP2 G B 705 161.284 115.808 -53.693 1.00 31.94 O
ATOM 5 O5' G B 705 161.247 113.470 -54.565 1.00 34.83 O
ATOM 6 C5' G B 705 161.018 112.457 -55.559 1.00 34.50 C
ATOM 7 C4' G B 705 161.514 111.122 -55.072 1.00 34.57 C
ATOM 8 O4' G B 705 162.965 111.131 -54.991 1.00 34.76 O
ATOM 9 C3' G B 705 161.065 110.696 -53.684 1.00 35.24 C
ATOM 10 O3' G B 705 159.727 110.165 -53.681 1.00 36.99 O
ATOM 11 C2' G B 705 162.135 109.670 -53.309 1.00 34.32 C
ATOM 12 O2' G B 705 161.915 108.393 -53.881 1.00 36.22 O
ATOM 13 C1' G B 705 163.390 110.270 -53.947 1.00 33.21 C
ATOM 14 N9 G B 705 164.139 111.042 -52.961 1.00 30.58 N
ATOM 15 C8 G B 705 164.100 112.399 -52.756 1.00 29.54 C
ATOM 16 N7 G B 705 164.765 112.775 -51.695 1.00 28.52 N
ATOM 17 C5 G B 705 165.295 111.600 -51.188 1.00 28.30 C
ATOM 18 C6 G B 705 166.068 111.374 -50.032 1.00 27.48 C
ATOM 19 O6 G B 705 166.404 112.181 -49.169 1.00 29.46 O
ATOM 20 N1 G B 705 166.436 110.042 -49.912 1.00 26.56 N
ATOM 21 C2 G B 705 166.077 109.045 -50.778 1.00 27.35 C
ATOM 22 N2 G B 705 166.539 107.820 -50.485 1.00 28.05 N
ATOM 23 N3 G B 705 165.321 109.233 -51.850 1.00 28.04 N
ATOM 24 C4 G B 705 164.966 110.529 -51.990 1.00 29.00 C
ATOM 25 P A B 706 158.682 110.612 -52.524 1.00 36.99 P
ATOM 26 OP1 A B 706 157.374 109.970 -52.862 1.00 38.61 O
ATOM 27 OP2 A B 706 158.775 112.082 -52.343 1.00 37.09 O
ATOM 28 O5' A B 706 159.206 109.905 -51.207 1.00 34.56 O
TER

Atoms:
OP1: (166.380,114.503,-61.548)
OP2: (167.369,114.909,-59.190)
C3': (166.297,109.756,-59.243)
C1': (164.010,110.272,-59.046)
C5': (167.020,112.142,-58.640)
O6: (161.855,110.345,-64.642)
O4': (164.760,111.362,-58.543)
C8: (163.796,111.766,-61.090)
C2: (161.690,108.036,-61.955)
C6: (162.031,109.897,-63.502)
C5: (162.700,110.504,-62.406)
C4: (162.805,109.806,-61.226)
P: (167.241,114.051,-60.404)
C4': (166.141,110.963,-58.336)
C2': (164.952,109.073,-59.080)
O2': (164.882,108.396,-57.837)
N1: (161.549,108.639,-63.175)
N2: (161.133,106.825,-61.829)
N3: (162.326,108.581,-60.930)
N7: (163.316,111.744,-62.303)
N9: (163.546,110.610,-60.390)
O5': (166.730,112.637,-59.948)
O3': (167.375,108.908,-58.895)
OP1: (159.433,114.983,-55.335)
OP2: (161.284,115.808,-53.693)
C3': (161.065,110.696,-53.684)
C1': (163.390,110.270,-53.947)
C5': (161.018,112.457,-55.559)
O6: (166.404,112.181,-49.169)
O4': (162.965,111.131,-54.991)
C8: (164.100,112.399,-52.756)
C2: (166.077,109.045,-50.778)
C6: (166.068,111.374,-50.032)
C5: (165.295,111.600,-51.188)
C4: (164.966,110.529,-51.990)
P: (160.861,114.980,-54.858)
C4': (161.514,111.122,-55.072)
C2': (162.135,109.670,-53.309)
O2': (161.915,108.393,-53.881)
N1: (166.436,110.042,-49.912)
N2: (166.539,107.820,-50.485)
N3: (165.321,109.233,-51.850)
N7: (164.765,112.775,-51.695)
N9: (164.139,111.042,-52.961)
O5': (161.247,113.470,-54.565)
O3': (159.727,110.165,-53.681)
Image (generated by PyMOL):
PyMOL image
show in jmol