ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8O:A664:A725

Extra

PDB:
ATOM 1 O3' A A 663 -2.705 122.048 72.852 1.00 19.95 O
ATOM 2 P G A 664 -2.005 120.631 72.539 1.00 18.30 P
ATOM 3 OP1 G A 664 -0.587 120.903 72.186 1.00 18.30 O
ATOM 4 OP2 G A 664 -2.863 119.950 71.547 1.00 18.30 O
ATOM 5 O5' G A 664 -2.067 119.860 73.932 1.00 18.30 O
ATOM 6 C5' G A 664 -2.942 118.758 74.110 1.00 18.30 C
ATOM 7 C4' G A 664 -2.484 117.847 75.216 1.00 18.30 C
ATOM 8 O4' G A 664 -1.274 117.146 74.814 1.00 18.30 O
ATOM 9 C3' G A 664 -2.099 118.512 76.523 1.00 18.30 C
ATOM 10 O3' G A 664 -3.213 118.877 77.315 1.00 18.30 O
ATOM 11 C2' G A 664 -1.205 117.457 77.159 1.00 18.30 C
ATOM 12 O2' G A 664 -1.972 116.371 77.668 1.00 18.30 O
ATOM 13 C1' G A 664 -0.424 116.974 75.934 1.00 18.30 C
ATOM 14 N9 G A 664 0.782 117.791 75.722 1.00 18.08 N
ATOM 15 C8 G A 664 0.978 118.659 74.677 1.00 18.08 C
ATOM 16 N7 G A 664 2.105 119.304 74.765 1.00 18.08 N
ATOM 17 C5 G A 664 2.679 118.852 75.947 1.00 18.08 C
ATOM 18 C6 G A 664 3.914 119.204 76.554 1.00 18.08 C
ATOM 19 O6 G A 664 4.773 120.010 76.158 1.00 18.08 O
ATOM 20 N1 G A 664 4.103 118.503 77.734 1.00 18.08 N
ATOM 21 C2 G A 664 3.220 117.602 78.246 1.00 18.08 C
ATOM 22 N2 G A 664 3.606 117.032 79.387 1.00 18.08 N
ATOM 23 N3 G A 664 2.071 117.272 77.701 1.00 18.08 N
ATOM 24 C4 G A 664 1.867 117.924 76.553 1.00 18.08 C
ATOM 25 P G A 665 -3.097 120.102 78.363 1.00 14.42 P
ATOM 26 OP1 G A 665 -4.438 120.250 79.021 1.00 14.42 O
ATOM 27 OP2 G A 665 -2.529 121.261 77.631 1.00 14.42 O
ATOM 28 O5' G A 665 -2.027 119.561 79.408 1.00 14.42 O
TER

ATOM 1 O3' C B 724 -0.659 114.142 70.654 1.00 6.68 O
ATOM 2 P G B 725 -0.655 112.534 70.672 1.00 26.18 P
ATOM 3 OP1 G B 725 0.746 112.081 70.454 1.00 26.18 O
ATOM 4 OP2 G B 725 -1.711 112.087 69.724 1.00 26.18 O
ATOM 5 O5' G B 725 -1.090 112.197 72.158 1.00 26.18 O
ATOM 6 C5' G B 725 -0.297 112.602 73.256 1.00 26.18 C
ATOM 7 C4' G B 725 -1.104 112.652 74.536 1.00 26.18 C
ATOM 8 O4' G B 725 -2.274 113.507 74.380 1.00 26.18 O
ATOM 9 C3' G B 725 -1.715 111.351 75.002 1.00 26.18 C
ATOM 10 O3' G B 725 -0.780 110.454 75.534 1.00 26.18 O
ATOM 11 C2' G B 725 -2.729 111.849 76.004 1.00 26.18 C
ATOM 12 O2' G B 725 -2.076 112.343 77.166 1.00 26.18 O
ATOM 13 C1' G B 725 -3.303 113.037 75.236 1.00 26.18 C
ATOM 14 N9 G B 725 -4.456 112.639 74.418 1.00 25.71 N
ATOM 15 C8 G B 725 -4.469 112.421 73.070 1.00 25.71 C
ATOM 16 N7 G B 725 -5.646 112.067 72.630 1.00 25.71 N
ATOM 17 C5 G B 725 -6.444 112.038 73.762 1.00 25.71 C
ATOM 18 C6 G B 725 -7.805 111.714 73.906 1.00 25.71 C
ATOM 19 O6 G B 725 -8.630 111.366 73.065 1.00 25.71 O
ATOM 20 N1 G B 725 -8.214 111.820 75.208 1.00 25.71 N
ATOM 21 C2 G B 725 -7.419 112.182 76.246 1.00 25.71 C
ATOM 22 N2 G B 725 -8.028 112.215 77.434 1.00 25.71 N
ATOM 23 N3 G B 725 -6.143 112.484 76.139 1.00 25.71 N
ATOM 24 C4 G B 725 -5.725 112.389 74.871 1.00 25.71 C
ATOM 25 P A B 726 -0.593 109.043 74.827 1.00 23.12 P
ATOM 26 OP1 A B 726 0.410 108.283 75.617 1.00 23.12 O
ATOM 27 OP2 A B 726 -0.323 109.310 73.394 1.00 23.12 O
ATOM 28 O5' A B 726 -2.032 108.388 74.986 1.00 23.12 O
TER

Atoms:
OP1: (-0.587,120.903,72.186)
OP2: (-2.863,119.950,71.547)
C3': (-2.099,118.512,76.523)
C1': (-0.424,116.974,75.934)
C5': (-2.942,118.758,74.110)
O6: (4.773,120.010,76.158)
O4': (-1.274,117.146,74.814)
C8: (0.978,118.659,74.677)
C2: (3.220,117.602,78.246)
C6: (3.914,119.204,76.554)
C5: (2.679,118.852,75.947)
C4: (1.867,117.924,76.553)
P: (-2.005,120.631,72.539)
C4': (-2.484,117.847,75.216)
C2': (-1.205,117.457,77.159)
O2': (-1.972,116.371,77.668)
N1: (4.103,118.503,77.734)
N2: (3.606,117.032,79.387)
N3: (2.071,117.272,77.701)
N7: (2.105,119.304,74.765)
N9: (0.782,117.791,75.722)
O5': (-2.067,119.860,73.932)
O3': (-3.213,118.877,77.315)
OP1: (0.746,112.081,70.454)
OP2: (-1.711,112.087,69.724)
C3': (-1.715,111.351,75.002)
C1': (-3.303,113.037,75.236)
C5': (-0.297,112.602,73.256)
O6: (-8.630,111.366,73.065)
O4': (-2.274,113.507,74.380)
C8: (-4.469,112.421,73.070)
C2: (-7.419,112.182,76.246)
C6: (-7.805,111.714,73.906)
C5: (-6.444,112.038,73.762)
C4: (-5.725,112.389,74.871)
P: (-0.655,112.534,70.672)
C4': (-1.104,112.652,74.536)
C2': (-2.729,111.849,76.004)
O2': (-2.076,112.343,77.166)
N1: (-8.214,111.820,75.208)
N2: (-8.028,112.215,77.434)
N3: (-6.143,112.484,76.139)
N7: (-5.646,112.067,72.630)
N9: (-4.456,112.639,74.418)
O5': (-1.090,112.197,72.158)
O3': (-0.780,110.454,75.534)
Image (generated by PyMOL):
PyMOL image
show in jmol