ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A525:A606

Extra

PDB:
ATOM 1 O3' A A 524 30.964 125.040 100.934 1.00 37.48 O
ATOM 2 P G A 525 30.339 123.562 100.804 1.00 39.82 P
ATOM 3 OP1 G A 525 29.097 123.662 100.009 1.00 40.17 O
ATOM 4 OP2 G A 525 30.312 122.858 102.110 1.00 37.29 O
ATOM 5 O5' G A 525 31.368 122.809 99.860 1.00 36.64 O
ATOM 6 C5' G A 525 30.941 121.677 99.098 1.00 34.03 C
ATOM 7 C4' G A 525 31.055 121.974 97.631 1.00 32.00 C
ATOM 8 O4' G A 525 32.402 122.440 97.367 1.00 31.25 O
ATOM 9 C3' G A 525 30.825 120.800 96.684 1.00 31.38 C
ATOM 10 O3' G A 525 30.161 121.288 95.515 1.00 30.31 O
ATOM 11 C2' G A 525 32.251 120.404 96.306 1.00 29.37 C
ATOM 12 O2' G A 525 32.274 119.787 95.047 1.00 30.67 O
ATOM 13 C1' G A 525 32.896 121.778 96.235 1.00 29.70 C
ATOM 14 N9 G A 525 34.347 121.875 96.229 1.00 30.02 N
ATOM 15 C8 G A 525 35.225 121.524 97.224 1.00 31.81 C
ATOM 16 N7 G A 525 36.468 121.773 96.921 1.00 31.16 N
ATOM 17 C5 G A 525 36.401 122.320 95.648 1.00 31.17 C
ATOM 18 C6 G A 525 37.424 122.812 94.798 1.00 31.09 C
ATOM 19 O6 G A 525 38.630 122.906 95.025 1.00 28.76 O
ATOM 20 N1 G A 525 36.912 123.248 93.579 1.00 31.75 N
ATOM 21 C2 G A 525 35.586 123.240 93.230 1.00 31.22 C
ATOM 22 N2 G A 525 35.293 123.686 91.993 1.00 32.09 N
ATOM 23 N3 G A 525 34.621 122.820 94.027 1.00 30.29 N
ATOM 24 C4 G A 525 35.098 122.372 95.207 1.00 30.40 C
ATOM 25 P C A 526 28.576 121.502 95.526 1.00 28.62 P
ATOM 26 OP1 C A 526 28.021 120.477 96.434 1.00 29.71 O
ATOM 27 OP2 C A 526 28.147 121.530 94.122 1.00 30.82 O
ATOM 28 O5' C A 526 28.414 122.971 96.113 1.00 27.37 O
TER

ATOM 1 O3' C B 605 26.399 110.780 102.699 1.00 36.58 O
ATOM 2 P G B 606 27.745 111.423 103.315 1.00 37.91 P
ATOM 3 OP1 G B 606 28.678 110.280 103.424 1.00 39.24 O
ATOM 4 OP2 G B 606 27.392 112.202 104.515 1.00 35.49 O
ATOM 5 O5' G B 606 28.278 112.449 102.213 1.00 37.07 O
ATOM 6 C5' G B 606 28.610 112.006 100.860 1.00 35.42 C
ATOM 7 C4' G B 606 28.825 113.197 99.940 1.00 33.13 C
ATOM 8 O4' G B 606 27.620 114.005 99.877 1.00 31.11 O
ATOM 9 C3' G B 606 29.870 114.195 100.395 1.00 33.31 C
ATOM 10 O3' G B 606 31.189 113.786 100.136 1.00 33.34 O
ATOM 11 C2' G B 606 29.498 115.455 99.636 1.00 32.50 C
ATOM 12 O2' G B 606 29.991 115.500 98.308 1.00 34.80 O
ATOM 13 C1' G B 606 27.974 115.371 99.689 1.00 30.92 C
ATOM 14 N9 G B 606 27.445 116.161 100.795 1.00 29.53 N
ATOM 15 C8 G B 606 27.073 115.737 102.048 1.00 29.14 C
ATOM 16 N7 G B 606 26.618 116.706 102.801 1.00 29.53 N
ATOM 17 C5 G B 606 26.699 117.834 101.992 1.00 29.59 C
ATOM 18 C6 G B 606 26.336 119.180 102.244 1.00 30.16 C
ATOM 19 O6 G B 606 25.836 119.670 103.262 1.00 32.74 O
ATOM 20 N1 G B 606 26.599 119.990 101.148 1.00 29.74 N
ATOM 21 C2 G B 606 27.133 119.570 99.966 1.00 30.29 C
ATOM 22 N2 G B 606 27.318 120.515 99.039 1.00 33.08 N
ATOM 23 N3 G B 606 27.463 118.322 99.711 1.00 29.84 N
ATOM 24 C4 G B 606 27.219 117.513 100.760 1.00 29.65 C
ATOM 25 P U B 607 32.286 113.984 101.269 1.00 35.08 P
ATOM 26 OP1 U B 607 32.950 112.663 101.363 1.00 33.67 O
ATOM 27 OP2 U B 607 31.641 114.582 102.477 1.00 33.36 O
ATOM 28 O5' U B 607 33.234 115.105 100.667 1.00 33.19 O
TER

Atoms:
OP1: (29.097,123.662,100.009)
OP2: (30.312,122.858,102.110)
C3': (30.825,120.800,96.684)
C1': (32.896,121.778,96.235)
C5': (30.941,121.677,99.098)
O6: (38.630,122.906,95.025)
O4': (32.402,122.440,97.367)
C8: (35.225,121.524,97.224)
C2: (35.586,123.240,93.230)
C6: (37.424,122.812,94.798)
C5: (36.401,122.320,95.648)
C4: (35.098,122.372,95.207)
P: (30.339,123.562,100.804)
C4': (31.055,121.974,97.631)
C2': (32.251,120.404,96.306)
O2': (32.274,119.787,95.047)
N1: (36.912,123.248,93.579)
N2: (35.293,123.686,91.993)
N3: (34.621,122.820,94.027)
N7: (36.468,121.773,96.921)
N9: (34.347,121.875,96.229)
O5': (31.368,122.809,99.860)
O3': (30.161,121.288,95.515)
OP1: (28.678,110.280,103.424)
OP2: (27.392,112.202,104.515)
C3': (29.870,114.195,100.395)
C1': (27.974,115.371,99.689)
C5': (28.610,112.006,100.860)
O6: (25.836,119.670,103.262)
O4': (27.620,114.005,99.877)
C8: (27.073,115.737,102.048)
C2: (27.133,119.570,99.966)
C6: (26.336,119.180,102.244)
C5: (26.699,117.834,101.992)
C4: (27.219,117.513,100.760)
P: (27.745,111.423,103.315)
C4': (28.825,113.197,99.940)
C2': (29.498,115.455,99.636)
O2': (29.991,115.500,98.308)
N1: (26.599,119.990,101.148)
N2: (27.318,120.515,99.039)
N3: (27.463,118.322,99.711)
N7: (26.618,116.706,102.801)
N9: (27.445,116.161,100.795)
O5': (28.278,112.449,102.213)
O3': (31.189,113.786,100.136)
Image (generated by PyMOL):
PyMOL image
show in jmol