ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A525:A606

Extra

PDB:
ATOM 1 O3' A A 524 31.069 125.311 100.948 1.00 40.38 O
ATOM 2 P G A 525 30.338 123.884 100.758 1.00 43.03 P
ATOM 3 OP1 G A 525 29.221 124.150 99.830 1.00 44.48 O
ATOM 4 OP2 G A 525 30.065 123.149 102.023 1.00 41.33 O
ATOM 5 O5' G A 525 31.397 123.035 99.925 1.00 41.31 O
ATOM 6 C5' G A 525 30.985 121.877 99.168 1.00 36.51 C
ATOM 7 C4' G A 525 31.097 122.166 97.694 1.00 33.64 C
ATOM 8 O4' G A 525 32.432 122.634 97.402 1.00 32.26 O
ATOM 9 C3' G A 525 30.846 121.010 96.733 1.00 31.84 C
ATOM 10 O3' G A 525 30.253 121.561 95.554 1.00 31.34 O
ATOM 11 C2' G A 525 32.263 120.595 96.356 1.00 30.05 C
ATOM 12 O2' G A 525 32.246 119.922 95.121 1.00 28.58 O
ATOM 13 C1' G A 525 32.909 121.974 96.262 1.00 31.06 C
ATOM 14 N9 G A 525 34.358 122.108 96.236 1.00 32.24 N
ATOM 15 C8 G A 525 35.237 121.758 97.223 1.00 35.02 C
ATOM 16 N7 G A 525 36.478 121.998 96.912 1.00 35.36 N
ATOM 17 C5 G A 525 36.411 122.545 95.644 1.00 33.77 C
ATOM 18 C6 G A 525 37.442 122.997 94.788 1.00 34.79 C
ATOM 19 O6 G A 525 38.655 123.007 94.990 1.00 34.24 O
ATOM 20 N1 G A 525 36.937 123.475 93.583 1.00 35.57 N
ATOM 21 C2 G A 525 35.606 123.520 93.250 1.00 35.01 C
ATOM 22 N2 G A 525 35.314 124.035 92.036 1.00 35.24 N
ATOM 23 N3 G A 525 34.635 123.097 94.046 1.00 33.69 N
ATOM 24 C4 G A 525 35.108 122.624 95.216 1.00 32.34 C
ATOM 25 P C A 526 28.681 121.836 95.490 1.00 28.74 P
ATOM 26 OP1 C A 526 28.057 120.782 96.300 1.00 29.57 O
ATOM 27 OP2 C A 526 28.359 121.952 94.060 1.00 30.03 O
ATOM 28 O5' C A 526 28.521 123.275 96.137 1.00 27.35 O
TER

ATOM 1 O3' C B 605 26.492 111.117 102.770 1.00 37.92 O
ATOM 2 P G B 606 27.862 111.745 103.366 1.00 39.40 P
ATOM 3 OP1 G B 606 28.808 110.606 103.466 1.00 41.76 O
ATOM 4 OP2 G B 606 27.539 112.537 104.574 1.00 35.95 O
ATOM 5 O5' G B 606 28.411 112.755 102.248 1.00 38.68 O
ATOM 6 C5' G B 606 28.677 112.307 100.877 1.00 37.89 C
ATOM 7 C4' G B 606 28.898 113.489 99.945 1.00 36.12 C
ATOM 8 O4' G B 606 27.706 114.303 99.863 1.00 34.63 O
ATOM 9 C3' G B 606 29.949 114.472 100.408 1.00 37.02 C
ATOM 10 O3' G B 606 31.246 114.073 100.104 1.00 38.94 O
ATOM 11 C2' G B 606 29.599 115.749 99.683 1.00 36.00 C
ATOM 12 O2' G B 606 30.170 115.860 98.394 1.00 37.94 O
ATOM 13 C1' G B 606 28.076 115.667 99.703 1.00 34.68 C
ATOM 14 N9 G B 606 27.551 116.433 100.825 1.00 33.31 N
ATOM 15 C8 G B 606 27.177 115.994 102.076 1.00 33.02 C
ATOM 16 N7 G B 606 26.717 116.956 102.832 1.00 32.67 N
ATOM 17 C5 G B 606 26.806 118.089 102.030 1.00 33.46 C
ATOM 18 C6 G B 606 26.447 119.443 102.279 1.00 34.49 C
ATOM 19 O6 G B 606 25.940 119.945 103.289 1.00 37.48 O
ATOM 20 N1 G B 606 26.726 120.246 101.189 1.00 34.06 N
ATOM 21 C2 G B 606 27.272 119.822 100.008 1.00 34.69 C
ATOM 22 N2 G B 606 27.493 120.766 99.074 1.00 38.87 N
ATOM 23 N3 G B 606 27.586 118.579 99.755 1.00 32.53 N
ATOM 24 C4 G B 606 27.331 117.774 100.799 1.00 32.56 C
ATOM 25 P U B 607 32.370 114.287 101.197 1.00 40.44 P
ATOM 26 OP1 U B 607 33.117 113.022 101.238 1.00 42.02 O
ATOM 27 OP2 U B 607 31.700 114.802 102.426 1.00 38.84 O
ATOM 28 O5' U B 607 33.285 115.431 100.592 1.00 39.92 O
TER

Atoms:
OP1: (29.221,124.150,99.830)
OP2: (30.065,123.149,102.023)
C3': (30.846,121.010,96.733)
C1': (32.909,121.974,96.262)
C5': (30.985,121.877,99.168)
O6: (38.655,123.007,94.990)
O4': (32.432,122.634,97.402)
C8: (35.237,121.758,97.223)
C2: (35.606,123.520,93.250)
C6: (37.442,122.997,94.788)
C5: (36.411,122.545,95.644)
C4: (35.108,122.624,95.216)
P: (30.338,123.884,100.758)
C4': (31.097,122.166,97.694)
C2': (32.263,120.595,96.356)
O2': (32.246,119.922,95.121)
N1: (36.937,123.475,93.583)
N2: (35.314,124.035,92.036)
N3: (34.635,123.097,94.046)
N7: (36.478,121.998,96.912)
N9: (34.358,122.108,96.236)
O5': (31.397,123.035,99.925)
O3': (30.253,121.561,95.554)
OP1: (28.808,110.606,103.466)
OP2: (27.539,112.537,104.574)
C3': (29.949,114.472,100.408)
C1': (28.076,115.667,99.703)
C5': (28.677,112.307,100.877)
O6: (25.940,119.945,103.289)
O4': (27.706,114.303,99.863)
C8: (27.177,115.994,102.076)
C2: (27.272,119.822,100.008)
C6: (26.447,119.443,102.279)
C5: (26.806,118.089,102.030)
C4: (27.331,117.774,100.799)
P: (27.862,111.745,103.366)
C4': (28.898,113.489,99.945)
C2': (29.599,115.749,99.683)
O2': (30.170,115.860,98.394)
N1: (26.726,120.246,101.189)
N2: (27.493,120.766,99.074)
N3: (27.586,118.579,99.755)
N7: (26.717,116.956,102.832)
N9: (27.551,116.433,100.825)
O5': (28.411,112.755,102.248)
O3': (31.246,114.073,100.104)
Image (generated by PyMOL):
PyMOL image
show in jmol