ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01918:01917

Extra

PDB:
ATOM 1 O3' G A1917 116.757 109.527 101.381 1.00 64.25 O
ATOM 2 P U A1918 116.907 109.983 102.906 1.00 64.75 P
ATOM 3 OP1 U A1918 116.970 108.784 103.783 1.00 66.49 O
ATOM 4 OP2 U A1918 115.867 111.008 103.148 1.00 65.07 O
ATOM 5 O5' U A1918 118.326 110.703 102.903 1.00 65.24 O
ATOM 6 C5' U A1918 119.545 109.952 102.713 1.00 62.44 C
ATOM 7 C4' U A1918 120.547 110.773 101.938 1.00 62.24 C
ATOM 8 O4' U A1918 120.246 110.716 100.523 1.00 62.66 O
ATOM 9 C3' U A1918 120.569 112.257 102.266 1.00 61.77 C
ATOM 10 O3' U A1918 121.345 112.521 103.432 1.00 62.47 O
ATOM 11 C2' U A1918 121.165 112.858 100.998 1.00 61.93 C
ATOM 12 O2' U A1918 122.571 112.738 100.919 1.00 61.61 O
ATOM 13 C1' U A1918 120.548 111.967 99.918 1.00 61.12 C
ATOM 14 N1 U A1918 119.324 112.492 99.280 1.00 60.47 N
ATOM 15 C2 U A1918 119.394 113.703 98.587 1.00 59.16 C
ATOM 16 O2 U A1918 120.403 114.382 98.517 1.00 56.98 O
ATOM 17 N3 U A1918 118.226 114.085 97.976 1.00 59.71 N
ATOM 18 C4 U A1918 117.024 113.406 97.975 1.00 59.89 C
ATOM 19 O4 U A1918 116.071 113.865 97.348 1.00 60.39 O
ATOM 20 C5 U A1918 117.022 112.192 98.730 1.00 60.17 C
ATOM 21 C6 U A1918 118.137 111.789 99.342 1.00 60.00 C
ATOM 22 P A A1919 120.839 113.606 104.514 1.00 64.42 P
ATOM 23 OP1 A A1919 121.388 113.184 105.831 1.00 66.06 O
ATOM 24 OP2 A A1919 119.378 113.782 104.364 1.00 62.44 O
ATOM 25 O5' A A1919 121.582 114.956 104.088 1.00 61.93 O
TER

ATOM 1 O3' G B1916 116.265 103.157 100.388 1.00 69.37 O
ATOM 2 P G B1917 117.086 104.467 100.817 1.00 70.06 P
ATOM 3 OP1 G B1917 118.503 104.349 100.370 1.00 70.74 O
ATOM 4 OP2 G B1917 116.782 104.721 102.254 1.00 68.16 O
ATOM 5 O5' G B1917 116.381 105.608 99.956 1.00 68.90 O
ATOM 6 C5' G B1917 117.151 106.590 99.254 1.00 64.39 C
ATOM 7 C4' G B1917 116.661 107.974 99.593 1.00 62.10 C
ATOM 8 O4' G B1917 115.437 108.288 98.861 1.00 59.47 O
ATOM 9 C3' G B1917 116.318 108.216 101.068 1.00 61.54 C
ATOM 10 O3' G B1917 116.757 109.527 101.381 1.00 64.25 O
ATOM 11 C2' G B1917 114.792 108.243 101.046 1.00 60.86 C
ATOM 12 O2' G B1917 114.209 108.947 102.123 1.00 60.45 O
ATOM 13 C1' G B1917 114.594 108.991 99.737 1.00 59.22 C
ATOM 14 N9 G B1917 113.257 109.123 99.175 1.00 57.65 N
ATOM 15 C8 G B1917 112.178 108.292 99.337 1.00 57.50 C
ATOM 16 N7 G B1917 111.105 108.730 98.736 1.00 58.21 N
ATOM 17 C5 G B1917 111.508 109.914 98.131 1.00 56.29 C
ATOM 18 C6 G B1917 110.781 110.835 97.341 1.00 56.73 C
ATOM 19 O6 G B1917 109.596 110.786 96.995 1.00 57.37 O
ATOM 20 N1 G B1917 111.575 111.905 96.943 1.00 57.23 N
ATOM 21 C2 G B1917 112.898 112.065 97.259 1.00 56.48 C
ATOM 22 N2 G B1917 113.490 113.171 96.790 1.00 55.23 N
ATOM 23 N3 G B1917 113.588 111.206 97.984 1.00 55.23 N
ATOM 24 C4 G B1917 112.833 110.164 98.386 1.00 56.01 C
ATOM 25 P U B1918 116.907 109.983 102.906 1.00 64.75 P
ATOM 26 OP1 U B1918 116.970 108.784 103.783 1.00 66.49 O
ATOM 27 OP2 U B1918 115.867 111.008 103.148 1.00 65.07 O
ATOM 28 O5' U B1918 118.326 110.703 102.903 1.00 65.24 O
TER

Atoms:
C4: (117.024,113.406,97.975)
N3: (118.226,114.085,97.976)
OP1: (116.970,108.784,103.783)
OP2: (115.867,111.008,103.148)
C2: (119.394,113.703,98.587)
C1': (120.548,111.967,99.918)
C3': (120.569,112.257,102.266)
O5': (118.326,110.703,102.903)
O4': (120.246,110.716,100.523)
C5': (119.545,109.952,102.713)
P: (116.907,109.983,102.906)
C4': (120.547,110.773,101.938)
C2': (121.165,112.858,100.998)
O2': (122.571,112.738,100.919)
N1: (119.324,112.492,99.280)
O4: (116.071,113.865,97.348)
O2: (120.403,114.382,98.517)
C6: (118.137,111.789,99.342)
C5: (117.022,112.192,98.730)
O3': (121.345,112.521,103.432)
OP1: (118.503,104.349,100.370)
OP2: (116.782,104.721,102.254)
C3': (116.318,108.216,101.068)
C1': (114.594,108.991,99.737)
C5': (117.151,106.590,99.254)
O6: (109.596,110.786,96.995)
O4': (115.437,108.288,98.861)
C8: (112.178,108.292,99.337)
C2: (112.898,112.065,97.259)
C6: (110.781,110.835,97.341)
C5: (111.508,109.914,98.131)
C4: (112.833,110.164,98.386)
P: (117.086,104.467,100.817)
C4': (116.661,107.974,99.593)
C2': (114.792,108.243,101.046)
O2': (114.209,108.947,102.123)
N1: (111.575,111.905,96.943)
N2: (113.490,113.171,96.790)
N3: (113.588,111.206,97.984)
N7: (111.105,108.730,98.736)
N9: (113.257,109.123,99.175)
O5': (116.381,105.608,99.956)
O3': (116.757,109.527,101.381)
Image (generated by PyMOL):
PyMOL image
show in jmol