ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:0525:0606

Extra

PDB:
ATOM 1 O3' A A 524 30.922 124.355 100.837 1.00 38.96 O
ATOM 2 P G A 525 30.242 122.919 100.633 1.00 38.98 P
ATOM 3 OP1 G A 525 29.058 123.139 99.765 1.00 40.81 O
ATOM 4 OP2 G A 525 30.070 122.241 101.935 1.00 40.45 O
ATOM 5 O5' G A 525 31.343 122.128 99.798 1.00 37.59 O
ATOM 6 C5' G A 525 30.995 120.972 99.030 1.00 35.45 C
ATOM 7 C4' G A 525 31.044 121.297 97.559 1.00 35.55 C
ATOM 8 O4' G A 525 32.359 121.817 97.192 1.00 33.21 O
ATOM 9 C3' G A 525 30.791 120.106 96.634 1.00 34.37 C
ATOM 10 O3' G A 525 30.147 120.570 95.450 1.00 35.04 O
ATOM 11 C2' G A 525 32.210 119.688 96.263 1.00 33.89 C
ATOM 12 O2' G A 525 32.284 118.934 95.070 1.00 32.14 O
ATOM 13 C1' G A 525 32.857 121.062 96.105 1.00 34.33 C
ATOM 14 N9 G A 525 34.318 121.132 96.082 1.00 34.85 N
ATOM 15 C8 G A 525 35.206 120.738 97.057 1.00 34.70 C
ATOM 16 N7 G A 525 36.453 120.951 96.730 1.00 34.33 N
ATOM 17 C5 G A 525 36.385 121.517 95.465 1.00 33.92 C
ATOM 18 C6 G A 525 37.422 121.978 94.598 1.00 35.43 C
ATOM 19 O6 G A 525 38.648 121.991 94.794 1.00 34.99 O
ATOM 20 N1 G A 525 36.905 122.471 93.406 1.00 31.31 N
ATOM 21 C2 G A 525 35.570 122.533 93.090 1.00 33.57 C
ATOM 22 N2 G A 525 35.267 123.051 91.890 1.00 32.93 N
ATOM 23 N3 G A 525 34.598 122.119 93.890 1.00 32.78 N
ATOM 24 C4 G A 525 35.075 121.628 95.050 1.00 33.07 C
ATOM 25 P C A 526 28.579 120.923 95.464 1.00 34.13 P
ATOM 26 OP1 C A 526 27.849 119.993 96.351 1.00 37.27 O
ATOM 27 OP2 C A 526 28.200 121.026 94.043 1.00 33.94 O
ATOM 28 O5' C A 526 28.492 122.377 96.104 1.00 35.21 O
TER

ATOM 1 O3' C B 605 26.317 110.211 102.591 1.00 40.97 O
ATOM 2 P G B 606 27.682 110.818 103.192 1.00 40.86 P
ATOM 3 OP1 G B 606 28.651 109.687 103.315 1.00 42.88 O
ATOM 4 OP2 G B 606 27.371 111.644 104.376 1.00 40.77 O
ATOM 5 O5' G B 606 28.198 111.820 102.061 1.00 42.83 O
ATOM 6 C5' G B 606 28.415 111.373 100.710 1.00 40.89 C
ATOM 7 C4' G B 606 28.725 112.550 99.819 1.00 41.08 C
ATOM 8 O4' G B 606 27.553 113.393 99.697 1.00 40.97 O
ATOM 9 C3' G B 606 29.800 113.497 100.324 1.00 41.35 C
ATOM 10 O3' G B 606 31.097 112.990 100.031 1.00 43.54 O
ATOM 11 C2' G B 606 29.488 114.764 99.542 1.00 40.32 C
ATOM 12 O2' G B 606 29.961 114.706 98.211 1.00 42.08 O
ATOM 13 C1' G B 606 27.955 114.743 99.532 1.00 38.12 C
ATOM 14 N9 G B 606 27.382 115.539 100.613 1.00 33.91 N
ATOM 15 C8 G B 606 27.048 115.114 101.876 1.00 29.52 C
ATOM 16 N7 G B 606 26.633 116.082 102.646 1.00 28.86 N
ATOM 17 C5 G B 606 26.673 117.211 101.838 1.00 30.19 C
ATOM 18 C6 G B 606 26.356 118.559 102.128 1.00 31.29 C
ATOM 19 O6 G B 606 25.955 119.041 103.188 1.00 36.87 O
ATOM 20 N1 G B 606 26.554 119.385 101.028 1.00 29.63 N
ATOM 21 C2 G B 606 27.000 118.967 99.805 1.00 30.80 C
ATOM 22 N2 G B 606 27.143 119.925 98.874 1.00 30.40 N
ATOM 23 N3 G B 606 27.292 117.708 99.514 1.00 29.85 N
ATOM 24 C4 G B 606 27.115 116.892 100.575 1.00 30.70 C
ATOM 25 P U B 607 32.335 113.318 101.003 1.00 45.19 P
ATOM 26 OP1 U B 607 33.206 112.113 100.973 1.00 41.21 O
ATOM 27 OP2 U B 607 31.877 113.876 102.308 1.00 44.70 O
ATOM 28 O5' U B 607 33.133 114.465 100.242 1.00 45.84 O
TER

Atoms:
OP1: (29.058,123.139,99.765)
OP2: (30.070,122.241,101.935)
C3': (30.791,120.106,96.634)
C1': (32.857,121.062,96.105)
C5': (30.995,120.972,99.030)
O6: (38.648,121.991,94.794)
O4': (32.359,121.817,97.192)
C8: (35.206,120.738,97.057)
C2: (35.570,122.533,93.090)
C6: (37.422,121.978,94.598)
C5: (36.385,121.517,95.465)
C4: (35.075,121.628,95.050)
P: (30.242,122.919,100.633)
C4': (31.044,121.297,97.559)
C2': (32.210,119.688,96.263)
O2': (32.284,118.934,95.070)
N1: (36.905,122.471,93.406)
N2: (35.267,123.051,91.890)
N3: (34.598,122.119,93.890)
N7: (36.453,120.951,96.730)
N9: (34.318,121.132,96.082)
O5': (31.343,122.128,99.798)
O3': (30.147,120.570,95.450)
OP1: (28.651,109.687,103.315)
OP2: (27.371,111.644,104.376)
C3': (29.800,113.497,100.324)
C1': (27.955,114.743,99.532)
C5': (28.415,111.373,100.710)
O6: (25.955,119.041,103.188)
O4': (27.553,113.393,99.697)
C8: (27.048,115.114,101.876)
C2: (27.000,118.967,99.805)
C6: (26.356,118.559,102.128)
C5: (26.673,117.211,101.838)
C4: (27.115,116.892,100.575)
P: (27.682,110.818,103.192)
C4': (28.725,112.550,99.819)
C2': (29.488,114.764,99.542)
O2': (29.961,114.706,98.211)
N1: (26.554,119.385,101.028)
N2: (27.143,119.925,98.874)
N3: (27.292,117.708,99.514)
N7: (26.633,116.082,102.646)
N9: (27.382,115.539,100.613)
O5': (28.198,111.820,102.061)
O3': (31.097,112.990,100.031)
Image (generated by PyMOL):
PyMOL image
show in jmol