Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0525:0606
Extra
PDB:
ATOM 1 O3' A A 524 30.824 125.367 100.562 1.00 35.88 O
ATOM 2 P G A 525 30.120 123.929 100.404 1.00 34.99 P
ATOM 3 OP1 G A 525 28.948 124.109 99.523 1.00 35.19 O
ATOM 4 OP2 G A 525 29.934 123.333 101.747 1.00 34.97 O
ATOM 5 O5' G A 525 31.206 123.074 99.612 1.00 34.74 O
ATOM 6 C5' G A 525 30.827 121.924 98.840 1.00 32.85 C
ATOM 7 C4' G A 525 30.932 122.237 97.366 1.00 34.55 C
ATOM 8 O4' G A 525 32.267 122.733 97.060 1.00 34.07 O
ATOM 9 C3' G A 525 30.696 121.063 96.416 1.00 32.48 C
ATOM 10 O3' G A 525 30.083 121.556 95.221 1.00 32.53 O
ATOM 11 C2' G A 525 32.125 120.651 96.073 1.00 31.28 C
ATOM 12 O2' G A 525 32.214 119.917 94.876 1.00 30.66 O
ATOM 13 C1' G A 525 32.772 122.028 95.946 1.00 33.28 C
ATOM 14 N9 G A 525 34.231 122.125 95.939 1.00 34.21 N
ATOM 15 C8 G A 525 35.099 121.769 96.943 1.00 35.17 C
ATOM 16 N7 G A 525 36.349 121.998 96.647 1.00 32.70 N
ATOM 17 C5 G A 525 36.307 122.538 95.372 1.00 33.87 C
ATOM 18 C6 G A 525 37.355 122.994 94.537 1.00 34.66 C
ATOM 19 O6 G A 525 38.566 123.027 94.770 1.00 36.48 O
ATOM 20 N1 G A 525 36.874 123.457 93.319 1.00 34.38 N
ATOM 21 C2 G A 525 35.554 123.492 92.955 1.00 33.91 C
ATOM 22 N2 G A 525 35.296 123.975 91.735 1.00 32.67 N
ATOM 23 N3 G A 525 34.561 123.081 93.730 1.00 34.61 N
ATOM 24 C4 G A 525 35.008 122.617 94.916 1.00 33.91 C
ATOM 25 P C A 526 28.513 121.896 95.194 1.00 30.46 P
ATOM 26 OP1 C A 526 27.790 120.957 96.070 1.00 34.07 O
ATOM 27 OP2 C A 526 28.122 122.010 93.781 1.00 33.96 O
ATOM 28 O5' C A 526 28.418 123.356 95.817 1.00 32.45 O
TER
ATOM 1 O3' C B 605 26.207 111.284 102.407 1.00 36.57 O
ATOM 2 P G B 606 27.575 111.893 103.005 1.00 37.83 P
ATOM 3 OP1 G B 606 28.515 110.755 103.138 1.00 37.69 O
ATOM 4 OP2 G B 606 27.267 112.727 104.190 1.00 37.90 O
ATOM 5 O5' G B 606 28.088 112.886 101.864 1.00 36.89 O
ATOM 6 C5' G B 606 28.369 112.406 100.528 1.00 35.39 C
ATOM 7 C4' G B 606 28.672 113.564 99.605 1.00 34.61 C
ATOM 8 O4' G B 606 27.496 114.402 99.458 1.00 34.77 O
ATOM 9 C3' G B 606 29.744 114.521 100.094 1.00 35.53 C
ATOM 10 O3' G B 606 31.036 114.018 99.794 1.00 37.37 O
ATOM 11 C2' G B 606 29.424 115.787 99.312 1.00 34.02 C
ATOM 12 O2' G B 606 29.909 115.752 97.985 1.00 36.31 O
ATOM 13 C1' G B 606 27.893 115.756 99.301 1.00 32.02 C
ATOM 14 N9 G B 606 27.327 116.546 100.390 1.00 29.15 N
ATOM 15 C8 G B 606 27.001 116.118 101.653 1.00 27.39 C
ATOM 16 N7 G B 606 26.593 117.087 102.431 1.00 25.64 N
ATOM 17 C5 G B 606 26.632 118.216 101.627 1.00 24.68 C
ATOM 18 C6 G B 606 26.321 119.564 101.925 1.00 26.05 C
ATOM 19 O6 G B 606 25.916 120.045 102.992 1.00 30.69 O
ATOM 20 N1 G B 606 26.520 120.390 100.828 1.00 23.30 N
ATOM 21 C2 G B 606 26.951 119.971 99.597 1.00 26.25 C
ATOM 22 N2 G B 606 27.091 120.928 98.663 1.00 27.38 N
ATOM 23 N3 G B 606 27.232 118.713 99.299 1.00 26.02 N
ATOM 24 C4 G B 606 27.060 117.897 100.358 1.00 26.45 C
ATOM 25 P U B 607 32.245 114.224 100.832 1.00 38.93 P
ATOM 26 OP1 U B 607 33.058 112.981 100.716 1.00 35.56 O
ATOM 27 OP2 U B 607 31.759 114.672 102.166 1.00 36.15 O
ATOM 28 O5' U B 607 33.111 115.402 100.204 1.00 37.42 O
TER
ATOM 2 P G A 525 30.120 123.929 100.404 1.00 34.99 P
ATOM 3 OP1 G A 525 28.948 124.109 99.523 1.00 35.19 O
ATOM 4 OP2 G A 525 29.934 123.333 101.747 1.00 34.97 O
ATOM 5 O5' G A 525 31.206 123.074 99.612 1.00 34.74 O
ATOM 6 C5' G A 525 30.827 121.924 98.840 1.00 32.85 C
ATOM 7 C4' G A 525 30.932 122.237 97.366 1.00 34.55 C
ATOM 8 O4' G A 525 32.267 122.733 97.060 1.00 34.07 O
ATOM 9 C3' G A 525 30.696 121.063 96.416 1.00 32.48 C
ATOM 10 O3' G A 525 30.083 121.556 95.221 1.00 32.53 O
ATOM 11 C2' G A 525 32.125 120.651 96.073 1.00 31.28 C
ATOM 12 O2' G A 525 32.214 119.917 94.876 1.00 30.66 O
ATOM 13 C1' G A 525 32.772 122.028 95.946 1.00 33.28 C
ATOM 14 N9 G A 525 34.231 122.125 95.939 1.00 34.21 N
ATOM 15 C8 G A 525 35.099 121.769 96.943 1.00 35.17 C
ATOM 16 N7 G A 525 36.349 121.998 96.647 1.00 32.70 N
ATOM 17 C5 G A 525 36.307 122.538 95.372 1.00 33.87 C
ATOM 18 C6 G A 525 37.355 122.994 94.537 1.00 34.66 C
ATOM 19 O6 G A 525 38.566 123.027 94.770 1.00 36.48 O
ATOM 20 N1 G A 525 36.874 123.457 93.319 1.00 34.38 N
ATOM 21 C2 G A 525 35.554 123.492 92.955 1.00 33.91 C
ATOM 22 N2 G A 525 35.296 123.975 91.735 1.00 32.67 N
ATOM 23 N3 G A 525 34.561 123.081 93.730 1.00 34.61 N
ATOM 24 C4 G A 525 35.008 122.617 94.916 1.00 33.91 C
ATOM 25 P C A 526 28.513 121.896 95.194 1.00 30.46 P
ATOM 26 OP1 C A 526 27.790 120.957 96.070 1.00 34.07 O
ATOM 27 OP2 C A 526 28.122 122.010 93.781 1.00 33.96 O
ATOM 28 O5' C A 526 28.418 123.356 95.817 1.00 32.45 O
TER
ATOM 1 O3' C B 605 26.207 111.284 102.407 1.00 36.57 O
ATOM 2 P G B 606 27.575 111.893 103.005 1.00 37.83 P
ATOM 3 OP1 G B 606 28.515 110.755 103.138 1.00 37.69 O
ATOM 4 OP2 G B 606 27.267 112.727 104.190 1.00 37.90 O
ATOM 5 O5' G B 606 28.088 112.886 101.864 1.00 36.89 O
ATOM 6 C5' G B 606 28.369 112.406 100.528 1.00 35.39 C
ATOM 7 C4' G B 606 28.672 113.564 99.605 1.00 34.61 C
ATOM 8 O4' G B 606 27.496 114.402 99.458 1.00 34.77 O
ATOM 9 C3' G B 606 29.744 114.521 100.094 1.00 35.53 C
ATOM 10 O3' G B 606 31.036 114.018 99.794 1.00 37.37 O
ATOM 11 C2' G B 606 29.424 115.787 99.312 1.00 34.02 C
ATOM 12 O2' G B 606 29.909 115.752 97.985 1.00 36.31 O
ATOM 13 C1' G B 606 27.893 115.756 99.301 1.00 32.02 C
ATOM 14 N9 G B 606 27.327 116.546 100.390 1.00 29.15 N
ATOM 15 C8 G B 606 27.001 116.118 101.653 1.00 27.39 C
ATOM 16 N7 G B 606 26.593 117.087 102.431 1.00 25.64 N
ATOM 17 C5 G B 606 26.632 118.216 101.627 1.00 24.68 C
ATOM 18 C6 G B 606 26.321 119.564 101.925 1.00 26.05 C
ATOM 19 O6 G B 606 25.916 120.045 102.992 1.00 30.69 O
ATOM 20 N1 G B 606 26.520 120.390 100.828 1.00 23.30 N
ATOM 21 C2 G B 606 26.951 119.971 99.597 1.00 26.25 C
ATOM 22 N2 G B 606 27.091 120.928 98.663 1.00 27.38 N
ATOM 23 N3 G B 606 27.232 118.713 99.299 1.00 26.02 N
ATOM 24 C4 G B 606 27.060 117.897 100.358 1.00 26.45 C
ATOM 25 P U B 607 32.245 114.224 100.832 1.00 38.93 P
ATOM 26 OP1 U B 607 33.058 112.981 100.716 1.00 35.56 O
ATOM 27 OP2 U B 607 31.759 114.672 102.166 1.00 36.15 O
ATOM 28 O5' U B 607 33.111 115.402 100.204 1.00 37.42 O
TER
Atoms:
OP1: (28.948,124.109,99.523)
OP2: (29.934,123.333,101.747)
C3': (30.696,121.063,96.416)
C1': (32.772,122.028,95.946)
C5': (30.827,121.924,98.840)
O6: (38.566,123.027,94.770)
O4': (32.267,122.733,97.060)
C8: (35.099,121.769,96.943)
C2: (35.554,123.492,92.955)
C6: (37.355,122.994,94.537)
C5: (36.307,122.538,95.372)
C4: (35.008,122.617,94.916)
P: (30.120,123.929,100.404)
C4': (30.932,122.237,97.366)
C2': (32.125,120.651,96.073)
O2': (32.214,119.917,94.876)
N1: (36.874,123.457,93.319)
N2: (35.296,123.975,91.735)
N3: (34.561,123.081,93.730)
N7: (36.349,121.998,96.647)
N9: (34.231,122.125,95.939)
O5': (31.206,123.074,99.612)
O3': (30.083,121.556,95.221)
OP2: (29.934,123.333,101.747)
C3': (30.696,121.063,96.416)
C1': (32.772,122.028,95.946)
C5': (30.827,121.924,98.840)
O6: (38.566,123.027,94.770)
O4': (32.267,122.733,97.060)
C8: (35.099,121.769,96.943)
C2: (35.554,123.492,92.955)
C6: (37.355,122.994,94.537)
C5: (36.307,122.538,95.372)
C4: (35.008,122.617,94.916)
P: (30.120,123.929,100.404)
C4': (30.932,122.237,97.366)
C2': (32.125,120.651,96.073)
O2': (32.214,119.917,94.876)
N1: (36.874,123.457,93.319)
N2: (35.296,123.975,91.735)
N3: (34.561,123.081,93.730)
N7: (36.349,121.998,96.647)
N9: (34.231,122.125,95.939)
O5': (31.206,123.074,99.612)
O3': (30.083,121.556,95.221)
OP1: (28.515,110.755,103.138)
OP2: (27.267,112.727,104.190)
C3': (29.744,114.521,100.094)
C1': (27.893,115.756,99.301)
C5': (28.369,112.406,100.528)
O6: (25.916,120.045,102.992)
O4': (27.496,114.402,99.458)
C8: (27.001,116.118,101.653)
C2: (26.951,119.971,99.597)
C6: (26.321,119.564,101.925)
C5: (26.632,118.216,101.627)
C4: (27.060,117.897,100.358)
P: (27.575,111.893,103.005)
C4': (28.672,113.564,99.605)
C2': (29.424,115.787,99.312)
O2': (29.909,115.752,97.985)
N1: (26.520,120.390,100.828)
N2: (27.091,120.928,98.663)
N3: (27.232,118.713,99.299)
N7: (26.593,117.087,102.431)
N9: (27.327,116.546,100.390)
O5': (28.088,112.886,101.864)
O3': (31.036,114.018,99.794)
OP2: (27.267,112.727,104.190)
C3': (29.744,114.521,100.094)
C1': (27.893,115.756,99.301)
C5': (28.369,112.406,100.528)
O6: (25.916,120.045,102.992)
O4': (27.496,114.402,99.458)
C8: (27.001,116.118,101.653)
C2: (26.951,119.971,99.597)
C6: (26.321,119.564,101.925)
C5: (26.632,118.216,101.627)
C4: (27.060,117.897,100.358)
P: (27.575,111.893,103.005)
C4': (28.672,113.564,99.605)
C2': (29.424,115.787,99.312)
O2': (29.909,115.752,97.985)
N1: (26.520,120.390,100.828)
N2: (27.091,120.928,98.663)
N3: (27.232,118.713,99.299)
N7: (26.593,117.087,102.431)
N9: (27.327,116.546,100.390)
O5': (28.088,112.886,101.864)
O3': (31.036,114.018,99.794)
Image (generated by PyMOL):