Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0525:0606
Extra
PDB:
ATOM 1 O3' A A 524 31.033 125.148 100.493 1.00 36.15 O
ATOM 2 P G A 525 30.346 123.707 100.356 1.00 35.77 P
ATOM 3 OP1 G A 525 29.132 123.890 99.545 1.00 37.51 O
ATOM 4 OP2 G A 525 30.239 123.088 101.696 1.00 36.92 O
ATOM 5 O5' G A 525 31.394 122.884 99.487 1.00 34.09 O
ATOM 6 C5' G A 525 30.985 121.745 98.716 1.00 32.07 C
ATOM 7 C4' G A 525 31.070 122.063 97.242 1.00 32.72 C
ATOM 8 O4' G A 525 32.397 122.562 96.912 1.00 33.10 O
ATOM 9 C3' G A 525 30.825 120.890 96.298 1.00 31.78 C
ATOM 10 O3' G A 525 30.191 121.383 95.117 1.00 31.32 O
ATOM 11 C2' G A 525 32.249 120.470 95.943 1.00 30.09 C
ATOM 12 O2' G A 525 32.323 119.751 94.736 1.00 30.14 O
ATOM 13 C1' G A 525 32.905 121.839 95.813 1.00 31.68 C
ATOM 14 N9 G A 525 34.364 121.911 95.820 1.00 33.27 N
ATOM 15 C8 G A 525 35.218 121.520 96.822 1.00 35.26 C
ATOM 16 N7 G A 525 36.475 121.726 96.536 1.00 33.52 N
ATOM 17 C5 G A 525 36.452 122.283 95.270 1.00 33.53 C
ATOM 18 C6 G A 525 37.512 122.725 94.450 1.00 34.20 C
ATOM 19 O6 G A 525 38.720 122.733 94.693 1.00 37.02 O
ATOM 20 N1 G A 525 37.050 123.214 93.237 1.00 35.03 N
ATOM 21 C2 G A 525 35.734 123.291 92.865 1.00 35.33 C
ATOM 22 N2 G A 525 35.497 123.799 91.655 1.00 34.79 N
ATOM 23 N3 G A 525 34.728 122.899 93.629 1.00 36.31 N
ATOM 24 C4 G A 525 35.158 122.403 94.810 1.00 34.42 C
ATOM 25 P C A 526 28.625 121.733 95.129 1.00 30.61 P
ATOM 26 OP1 C A 526 27.940 120.755 95.995 1.00 31.86 O
ATOM 27 OP2 C A 526 28.207 121.874 93.722 1.00 33.31 O
ATOM 28 O5' C A 526 28.555 123.183 95.786 1.00 30.34 O
TER
ATOM 1 O3' C B 605 26.337 111.096 102.307 1.00 35.75 O
ATOM 2 P G B 606 27.698 111.694 102.931 1.00 38.06 P
ATOM 3 OP1 G B 606 28.635 110.553 103.056 1.00 39.40 O
ATOM 4 OP2 G B 606 27.385 112.517 104.126 1.00 38.65 O
ATOM 5 O5' G B 606 28.239 112.696 101.815 1.00 37.03 O
ATOM 6 C5' G B 606 28.455 112.248 100.463 1.00 36.01 C
ATOM 7 C4' G B 606 28.744 113.421 99.564 1.00 35.15 C
ATOM 8 O4' G B 606 27.576 114.275 99.456 1.00 35.02 O
ATOM 9 C3' G B 606 29.826 114.354 100.066 1.00 36.35 C
ATOM 10 O3' G B 606 31.107 113.820 99.774 1.00 37.94 O
ATOM 11 C2' G B 606 29.523 115.633 99.298 1.00 34.65 C
ATOM 12 O2' G B 606 30.013 115.604 97.972 1.00 34.74 O
ATOM 13 C1' G B 606 27.989 115.622 99.294 1.00 33.46 C
ATOM 14 N9 G B 606 27.418 116.424 100.374 1.00 31.51 N
ATOM 15 C8 G B 606 27.047 116.003 101.628 1.00 29.11 C
ATOM 16 N7 G B 606 26.632 116.979 102.393 1.00 28.30 N
ATOM 17 C5 G B 606 26.716 118.107 101.590 1.00 28.77 C
ATOM 18 C6 G B 606 26.406 119.466 101.871 1.00 29.43 C
ATOM 19 O6 G B 606 25.978 119.966 102.919 1.00 33.54 O
ATOM 20 N1 G B 606 26.642 120.279 100.774 1.00 28.89 N
ATOM 21 C2 G B 606 27.112 119.851 99.561 1.00 31.11 C
ATOM 22 N2 G B 606 27.280 120.805 98.629 1.00 32.82 N
ATOM 23 N3 G B 606 27.400 118.590 99.280 1.00 30.10 N
ATOM 24 C4 G B 606 27.184 117.780 100.335 1.00 30.45 C
ATOM 25 P U B 607 32.332 114.075 100.778 1.00 38.01 P
ATOM 26 OP1 U B 607 33.099 112.809 100.775 1.00 35.57 O
ATOM 27 OP2 U B 607 31.867 114.658 102.067 1.00 35.37 O
ATOM 28 O5' U B 607 33.202 115.182 100.033 1.00 37.30 O
TER
ATOM 2 P G A 525 30.346 123.707 100.356 1.00 35.77 P
ATOM 3 OP1 G A 525 29.132 123.890 99.545 1.00 37.51 O
ATOM 4 OP2 G A 525 30.239 123.088 101.696 1.00 36.92 O
ATOM 5 O5' G A 525 31.394 122.884 99.487 1.00 34.09 O
ATOM 6 C5' G A 525 30.985 121.745 98.716 1.00 32.07 C
ATOM 7 C4' G A 525 31.070 122.063 97.242 1.00 32.72 C
ATOM 8 O4' G A 525 32.397 122.562 96.912 1.00 33.10 O
ATOM 9 C3' G A 525 30.825 120.890 96.298 1.00 31.78 C
ATOM 10 O3' G A 525 30.191 121.383 95.117 1.00 31.32 O
ATOM 11 C2' G A 525 32.249 120.470 95.943 1.00 30.09 C
ATOM 12 O2' G A 525 32.323 119.751 94.736 1.00 30.14 O
ATOM 13 C1' G A 525 32.905 121.839 95.813 1.00 31.68 C
ATOM 14 N9 G A 525 34.364 121.911 95.820 1.00 33.27 N
ATOM 15 C8 G A 525 35.218 121.520 96.822 1.00 35.26 C
ATOM 16 N7 G A 525 36.475 121.726 96.536 1.00 33.52 N
ATOM 17 C5 G A 525 36.452 122.283 95.270 1.00 33.53 C
ATOM 18 C6 G A 525 37.512 122.725 94.450 1.00 34.20 C
ATOM 19 O6 G A 525 38.720 122.733 94.693 1.00 37.02 O
ATOM 20 N1 G A 525 37.050 123.214 93.237 1.00 35.03 N
ATOM 21 C2 G A 525 35.734 123.291 92.865 1.00 35.33 C
ATOM 22 N2 G A 525 35.497 123.799 91.655 1.00 34.79 N
ATOM 23 N3 G A 525 34.728 122.899 93.629 1.00 36.31 N
ATOM 24 C4 G A 525 35.158 122.403 94.810 1.00 34.42 C
ATOM 25 P C A 526 28.625 121.733 95.129 1.00 30.61 P
ATOM 26 OP1 C A 526 27.940 120.755 95.995 1.00 31.86 O
ATOM 27 OP2 C A 526 28.207 121.874 93.722 1.00 33.31 O
ATOM 28 O5' C A 526 28.555 123.183 95.786 1.00 30.34 O
TER
ATOM 1 O3' C B 605 26.337 111.096 102.307 1.00 35.75 O
ATOM 2 P G B 606 27.698 111.694 102.931 1.00 38.06 P
ATOM 3 OP1 G B 606 28.635 110.553 103.056 1.00 39.40 O
ATOM 4 OP2 G B 606 27.385 112.517 104.126 1.00 38.65 O
ATOM 5 O5' G B 606 28.239 112.696 101.815 1.00 37.03 O
ATOM 6 C5' G B 606 28.455 112.248 100.463 1.00 36.01 C
ATOM 7 C4' G B 606 28.744 113.421 99.564 1.00 35.15 C
ATOM 8 O4' G B 606 27.576 114.275 99.456 1.00 35.02 O
ATOM 9 C3' G B 606 29.826 114.354 100.066 1.00 36.35 C
ATOM 10 O3' G B 606 31.107 113.820 99.774 1.00 37.94 O
ATOM 11 C2' G B 606 29.523 115.633 99.298 1.00 34.65 C
ATOM 12 O2' G B 606 30.013 115.604 97.972 1.00 34.74 O
ATOM 13 C1' G B 606 27.989 115.622 99.294 1.00 33.46 C
ATOM 14 N9 G B 606 27.418 116.424 100.374 1.00 31.51 N
ATOM 15 C8 G B 606 27.047 116.003 101.628 1.00 29.11 C
ATOM 16 N7 G B 606 26.632 116.979 102.393 1.00 28.30 N
ATOM 17 C5 G B 606 26.716 118.107 101.590 1.00 28.77 C
ATOM 18 C6 G B 606 26.406 119.466 101.871 1.00 29.43 C
ATOM 19 O6 G B 606 25.978 119.966 102.919 1.00 33.54 O
ATOM 20 N1 G B 606 26.642 120.279 100.774 1.00 28.89 N
ATOM 21 C2 G B 606 27.112 119.851 99.561 1.00 31.11 C
ATOM 22 N2 G B 606 27.280 120.805 98.629 1.00 32.82 N
ATOM 23 N3 G B 606 27.400 118.590 99.280 1.00 30.10 N
ATOM 24 C4 G B 606 27.184 117.780 100.335 1.00 30.45 C
ATOM 25 P U B 607 32.332 114.075 100.778 1.00 38.01 P
ATOM 26 OP1 U B 607 33.099 112.809 100.775 1.00 35.57 O
ATOM 27 OP2 U B 607 31.867 114.658 102.067 1.00 35.37 O
ATOM 28 O5' U B 607 33.202 115.182 100.033 1.00 37.30 O
TER
Atoms:
OP1: (29.132,123.890,99.545)
OP2: (30.239,123.088,101.696)
C3': (30.825,120.890,96.298)
C1': (32.905,121.839,95.813)
C5': (30.985,121.745,98.716)
O6: (38.720,122.733,94.693)
O4': (32.397,122.562,96.912)
C8: (35.218,121.520,96.822)
C2: (35.734,123.291,92.865)
C6: (37.512,122.725,94.450)
C5: (36.452,122.283,95.270)
C4: (35.158,122.403,94.810)
P: (30.346,123.707,100.356)
C4': (31.070,122.063,97.242)
C2': (32.249,120.470,95.943)
O2': (32.323,119.751,94.736)
N1: (37.050,123.214,93.237)
N2: (35.497,123.799,91.655)
N3: (34.728,122.899,93.629)
N7: (36.475,121.726,96.536)
N9: (34.364,121.911,95.820)
O5': (31.394,122.884,99.487)
O3': (30.191,121.383,95.117)
OP2: (30.239,123.088,101.696)
C3': (30.825,120.890,96.298)
C1': (32.905,121.839,95.813)
C5': (30.985,121.745,98.716)
O6: (38.720,122.733,94.693)
O4': (32.397,122.562,96.912)
C8: (35.218,121.520,96.822)
C2: (35.734,123.291,92.865)
C6: (37.512,122.725,94.450)
C5: (36.452,122.283,95.270)
C4: (35.158,122.403,94.810)
P: (30.346,123.707,100.356)
C4': (31.070,122.063,97.242)
C2': (32.249,120.470,95.943)
O2': (32.323,119.751,94.736)
N1: (37.050,123.214,93.237)
N2: (35.497,123.799,91.655)
N3: (34.728,122.899,93.629)
N7: (36.475,121.726,96.536)
N9: (34.364,121.911,95.820)
O5': (31.394,122.884,99.487)
O3': (30.191,121.383,95.117)
OP1: (28.635,110.553,103.056)
OP2: (27.385,112.517,104.126)
C3': (29.826,114.354,100.066)
C1': (27.989,115.622,99.294)
C5': (28.455,112.248,100.463)
O6: (25.978,119.966,102.919)
O4': (27.576,114.275,99.456)
C8: (27.047,116.003,101.628)
C2: (27.112,119.851,99.561)
C6: (26.406,119.466,101.871)
C5: (26.716,118.107,101.590)
C4: (27.184,117.780,100.335)
P: (27.698,111.694,102.931)
C4': (28.744,113.421,99.564)
C2': (29.523,115.633,99.298)
O2': (30.013,115.604,97.972)
N1: (26.642,120.279,100.774)
N2: (27.280,120.805,98.629)
N3: (27.400,118.590,99.280)
N7: (26.632,116.979,102.393)
N9: (27.418,116.424,100.374)
O5': (28.239,112.696,101.815)
O3': (31.107,113.820,99.774)
OP2: (27.385,112.517,104.126)
C3': (29.826,114.354,100.066)
C1': (27.989,115.622,99.294)
C5': (28.455,112.248,100.463)
O6: (25.978,119.966,102.919)
O4': (27.576,114.275,99.456)
C8: (27.047,116.003,101.628)
C2: (27.112,119.851,99.561)
C6: (26.406,119.466,101.871)
C5: (26.716,118.107,101.590)
C4: (27.184,117.780,100.335)
P: (27.698,111.694,102.931)
C4': (28.744,113.421,99.564)
C2': (29.523,115.633,99.298)
O2': (30.013,115.604,97.972)
N1: (26.642,120.279,100.774)
N2: (27.280,120.805,98.629)
N3: (27.400,118.590,99.280)
N7: (26.632,116.979,102.393)
N9: (27.418,116.424,100.374)
O5': (28.239,112.696,101.815)
O3': (31.107,113.820,99.774)
Image (generated by PyMOL):