Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0525:0606
Extra
PDB:
ATOM 1 O3' A A 524 31.078 125.600 100.875 1.00 47.18 O
ATOM 2 P G A 525 30.376 124.173 100.694 1.00 47.45 P
ATOM 3 OP1 G A 525 29.167 124.403 99.877 1.00 49.66 O
ATOM 4 OP2 G A 525 30.252 123.535 102.027 1.00 48.52 O
ATOM 5 O5' G A 525 31.411 123.343 99.810 1.00 47.91 O
ATOM 6 C5' G A 525 30.998 122.166 99.074 1.00 45.13 C
ATOM 7 C4' G A 525 31.145 122.410 97.589 1.00 43.42 C
ATOM 8 O4' G A 525 32.492 122.886 97.309 1.00 43.54 O
ATOM 9 C3' G A 525 30.936 121.207 96.670 1.00 41.58 C
ATOM 10 O3' G A 525 30.319 121.656 95.454 1.00 41.28 O
ATOM 11 C2' G A 525 32.376 120.812 96.337 1.00 41.35 C
ATOM 12 O2' G A 525 32.511 120.077 95.143 1.00 42.39 O
ATOM 13 C1' G A 525 33.004 122.192 96.194 1.00 42.43 C
ATOM 14 N9 G A 525 34.465 122.288 96.194 1.00 44.42 N
ATOM 15 C8 G A 525 35.328 121.934 97.204 1.00 45.86 C
ATOM 16 N7 G A 525 36.582 122.144 96.905 1.00 44.29 N
ATOM 17 C5 G A 525 36.548 122.667 95.625 1.00 44.16 C
ATOM 18 C6 G A 525 37.599 123.092 94.787 1.00 44.39 C
ATOM 19 O6 G A 525 38.809 123.106 95.017 1.00 44.92 O
ATOM 20 N1 G A 525 37.124 123.551 93.570 1.00 45.53 N
ATOM 21 C2 G A 525 35.804 123.613 93.212 1.00 45.10 C
ATOM 22 N2 G A 525 35.547 124.097 91.993 1.00 46.09 N
ATOM 23 N3 G A 525 34.811 123.231 93.989 1.00 45.12 N
ATOM 24 C4 G A 525 35.250 122.767 95.171 1.00 44.34 C
ATOM 25 P C A 526 28.749 122.006 95.418 1.00 36.26 P
ATOM 26 OP1 C A 526 28.053 121.089 96.328 1.00 38.29 O
ATOM 27 OP2 C A 526 28.367 122.055 94.004 1.00 36.57 O
ATOM 28 O5' C A 526 28.660 123.489 95.990 1.00 37.53 O
TER
ATOM 1 O3' C B 605 26.438 111.445 102.693 1.00 44.33 O
ATOM 2 P G B 606 27.829 112.036 103.254 1.00 44.53 P
ATOM 3 OP1 G B 606 28.754 110.886 103.369 1.00 43.91 O
ATOM 4 OP2 G B 606 27.542 112.865 104.451 1.00 43.52 O
ATOM 5 O5' G B 606 28.321 113.029 102.101 1.00 42.88 O
ATOM 6 C5' G B 606 28.567 112.556 100.756 1.00 40.67 C
ATOM 7 C4' G B 606 28.883 113.715 99.844 1.00 39.16 C
ATOM 8 O4' G B 606 27.709 114.547 99.694 1.00 38.90 O
ATOM 9 C3' G B 606 29.943 114.668 100.365 1.00 40.56 C
ATOM 10 O3' G B 606 31.251 114.188 100.088 1.00 44.95 O
ATOM 11 C2' G B 606 29.636 115.953 99.612 1.00 38.38 C
ATOM 12 O2' G B 606 30.211 115.997 98.322 1.00 38.11 O
ATOM 13 C1' G B 606 28.104 115.904 99.545 1.00 37.65 C
ATOM 14 N9 G B 606 27.497 116.702 100.606 1.00 35.30 N
ATOM 15 C8 G B 606 27.133 116.294 101.868 1.00 34.38 C
ATOM 16 N7 G B 606 26.722 117.278 102.626 1.00 33.53 N
ATOM 17 C5 G B 606 26.792 118.394 101.806 1.00 33.77 C
ATOM 18 C6 G B 606 26.480 119.752 102.070 1.00 34.21 C
ATOM 19 O6 G B 606 26.080 120.270 103.119 1.00 38.54 O
ATOM 20 N1 G B 606 26.679 120.543 100.955 1.00 33.29 N
ATOM 21 C2 G B 606 27.121 120.098 99.742 1.00 35.34 C
ATOM 22 N2 G B 606 27.248 121.036 98.795 1.00 38.88 N
ATOM 23 N3 G B 606 27.420 118.838 99.476 1.00 34.32 N
ATOM 24 C4 G B 606 27.237 118.048 100.547 1.00 34.36 C
ATOM 25 P U B 607 32.447 114.470 101.123 1.00 45.51 P
ATOM 26 OP1 U B 607 33.244 113.223 101.146 1.00 43.18 O
ATOM 27 OP2 U B 607 31.917 115.029 102.391 1.00 44.54 O
ATOM 28 O5' U B 607 33.315 115.601 100.410 1.00 45.44 O
TER
ATOM 2 P G A 525 30.376 124.173 100.694 1.00 47.45 P
ATOM 3 OP1 G A 525 29.167 124.403 99.877 1.00 49.66 O
ATOM 4 OP2 G A 525 30.252 123.535 102.027 1.00 48.52 O
ATOM 5 O5' G A 525 31.411 123.343 99.810 1.00 47.91 O
ATOM 6 C5' G A 525 30.998 122.166 99.074 1.00 45.13 C
ATOM 7 C4' G A 525 31.145 122.410 97.589 1.00 43.42 C
ATOM 8 O4' G A 525 32.492 122.886 97.309 1.00 43.54 O
ATOM 9 C3' G A 525 30.936 121.207 96.670 1.00 41.58 C
ATOM 10 O3' G A 525 30.319 121.656 95.454 1.00 41.28 O
ATOM 11 C2' G A 525 32.376 120.812 96.337 1.00 41.35 C
ATOM 12 O2' G A 525 32.511 120.077 95.143 1.00 42.39 O
ATOM 13 C1' G A 525 33.004 122.192 96.194 1.00 42.43 C
ATOM 14 N9 G A 525 34.465 122.288 96.194 1.00 44.42 N
ATOM 15 C8 G A 525 35.328 121.934 97.204 1.00 45.86 C
ATOM 16 N7 G A 525 36.582 122.144 96.905 1.00 44.29 N
ATOM 17 C5 G A 525 36.548 122.667 95.625 1.00 44.16 C
ATOM 18 C6 G A 525 37.599 123.092 94.787 1.00 44.39 C
ATOM 19 O6 G A 525 38.809 123.106 95.017 1.00 44.92 O
ATOM 20 N1 G A 525 37.124 123.551 93.570 1.00 45.53 N
ATOM 21 C2 G A 525 35.804 123.613 93.212 1.00 45.10 C
ATOM 22 N2 G A 525 35.547 124.097 91.993 1.00 46.09 N
ATOM 23 N3 G A 525 34.811 123.231 93.989 1.00 45.12 N
ATOM 24 C4 G A 525 35.250 122.767 95.171 1.00 44.34 C
ATOM 25 P C A 526 28.749 122.006 95.418 1.00 36.26 P
ATOM 26 OP1 C A 526 28.053 121.089 96.328 1.00 38.29 O
ATOM 27 OP2 C A 526 28.367 122.055 94.004 1.00 36.57 O
ATOM 28 O5' C A 526 28.660 123.489 95.990 1.00 37.53 O
TER
ATOM 1 O3' C B 605 26.438 111.445 102.693 1.00 44.33 O
ATOM 2 P G B 606 27.829 112.036 103.254 1.00 44.53 P
ATOM 3 OP1 G B 606 28.754 110.886 103.369 1.00 43.91 O
ATOM 4 OP2 G B 606 27.542 112.865 104.451 1.00 43.52 O
ATOM 5 O5' G B 606 28.321 113.029 102.101 1.00 42.88 O
ATOM 6 C5' G B 606 28.567 112.556 100.756 1.00 40.67 C
ATOM 7 C4' G B 606 28.883 113.715 99.844 1.00 39.16 C
ATOM 8 O4' G B 606 27.709 114.547 99.694 1.00 38.90 O
ATOM 9 C3' G B 606 29.943 114.668 100.365 1.00 40.56 C
ATOM 10 O3' G B 606 31.251 114.188 100.088 1.00 44.95 O
ATOM 11 C2' G B 606 29.636 115.953 99.612 1.00 38.38 C
ATOM 12 O2' G B 606 30.211 115.997 98.322 1.00 38.11 O
ATOM 13 C1' G B 606 28.104 115.904 99.545 1.00 37.65 C
ATOM 14 N9 G B 606 27.497 116.702 100.606 1.00 35.30 N
ATOM 15 C8 G B 606 27.133 116.294 101.868 1.00 34.38 C
ATOM 16 N7 G B 606 26.722 117.278 102.626 1.00 33.53 N
ATOM 17 C5 G B 606 26.792 118.394 101.806 1.00 33.77 C
ATOM 18 C6 G B 606 26.480 119.752 102.070 1.00 34.21 C
ATOM 19 O6 G B 606 26.080 120.270 103.119 1.00 38.54 O
ATOM 20 N1 G B 606 26.679 120.543 100.955 1.00 33.29 N
ATOM 21 C2 G B 606 27.121 120.098 99.742 1.00 35.34 C
ATOM 22 N2 G B 606 27.248 121.036 98.795 1.00 38.88 N
ATOM 23 N3 G B 606 27.420 118.838 99.476 1.00 34.32 N
ATOM 24 C4 G B 606 27.237 118.048 100.547 1.00 34.36 C
ATOM 25 P U B 607 32.447 114.470 101.123 1.00 45.51 P
ATOM 26 OP1 U B 607 33.244 113.223 101.146 1.00 43.18 O
ATOM 27 OP2 U B 607 31.917 115.029 102.391 1.00 44.54 O
ATOM 28 O5' U B 607 33.315 115.601 100.410 1.00 45.44 O
TER
Atoms:
OP1: (29.167,124.403,99.877)
OP2: (30.252,123.535,102.027)
C3': (30.936,121.207,96.670)
C1': (33.004,122.192,96.194)
C5': (30.998,122.166,99.074)
O6: (38.809,123.106,95.017)
O4': (32.492,122.886,97.309)
C8: (35.328,121.934,97.204)
C2: (35.804,123.613,93.212)
C6: (37.599,123.092,94.787)
C5: (36.548,122.667,95.625)
C4: (35.250,122.767,95.171)
P: (30.376,124.173,100.694)
C4': (31.145,122.410,97.589)
C2': (32.376,120.812,96.337)
O2': (32.511,120.077,95.143)
N1: (37.124,123.551,93.570)
N2: (35.547,124.097,91.993)
N3: (34.811,123.231,93.989)
N7: (36.582,122.144,96.905)
N9: (34.465,122.288,96.194)
O5': (31.411,123.343,99.810)
O3': (30.319,121.656,95.454)
OP2: (30.252,123.535,102.027)
C3': (30.936,121.207,96.670)
C1': (33.004,122.192,96.194)
C5': (30.998,122.166,99.074)
O6: (38.809,123.106,95.017)
O4': (32.492,122.886,97.309)
C8: (35.328,121.934,97.204)
C2: (35.804,123.613,93.212)
C6: (37.599,123.092,94.787)
C5: (36.548,122.667,95.625)
C4: (35.250,122.767,95.171)
P: (30.376,124.173,100.694)
C4': (31.145,122.410,97.589)
C2': (32.376,120.812,96.337)
O2': (32.511,120.077,95.143)
N1: (37.124,123.551,93.570)
N2: (35.547,124.097,91.993)
N3: (34.811,123.231,93.989)
N7: (36.582,122.144,96.905)
N9: (34.465,122.288,96.194)
O5': (31.411,123.343,99.810)
O3': (30.319,121.656,95.454)
OP1: (28.754,110.886,103.369)
OP2: (27.542,112.865,104.451)
C3': (29.943,114.668,100.365)
C1': (28.104,115.904,99.545)
C5': (28.567,112.556,100.756)
O6: (26.080,120.270,103.119)
O4': (27.709,114.547,99.694)
C8: (27.133,116.294,101.868)
C2: (27.121,120.098,99.742)
C6: (26.480,119.752,102.070)
C5: (26.792,118.394,101.806)
C4: (27.237,118.048,100.547)
P: (27.829,112.036,103.254)
C4': (28.883,113.715,99.844)
C2': (29.636,115.953,99.612)
O2': (30.211,115.997,98.322)
N1: (26.679,120.543,100.955)
N2: (27.248,121.036,98.795)
N3: (27.420,118.838,99.476)
N7: (26.722,117.278,102.626)
N9: (27.497,116.702,100.606)
O5': (28.321,113.029,102.101)
O3': (31.251,114.188,100.088)
OP2: (27.542,112.865,104.451)
C3': (29.943,114.668,100.365)
C1': (28.104,115.904,99.545)
C5': (28.567,112.556,100.756)
O6: (26.080,120.270,103.119)
O4': (27.709,114.547,99.694)
C8: (27.133,116.294,101.868)
C2: (27.121,120.098,99.742)
C6: (26.480,119.752,102.070)
C5: (26.792,118.394,101.806)
C4: (27.237,118.048,100.547)
P: (27.829,112.036,103.254)
C4': (28.883,113.715,99.844)
C2': (29.636,115.953,99.612)
O2': (30.211,115.997,98.322)
N1: (26.679,120.543,100.955)
N2: (27.248,121.036,98.795)
N3: (27.420,118.838,99.476)
N7: (26.722,117.278,102.626)
N9: (27.497,116.702,100.606)
O5': (28.321,113.029,102.101)
O3': (31.251,114.188,100.088)
Image (generated by PyMOL):