Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0525:0606
Extra
PDB:
ATOM 1 O3' A A 524 30.861 125.276 100.548 1.00 41.65 O
ATOM 2 P G A 525 30.212 123.823 100.366 1.00 41.61 P
ATOM 3 OP1 G A 525 28.954 124.018 99.624 1.00 42.76 O
ATOM 4 OP2 G A 525 30.185 123.128 101.673 1.00 41.84 O
ATOM 5 O5' G A 525 31.255 123.081 99.422 1.00 39.98 O
ATOM 6 C5' G A 525 30.890 121.904 98.691 1.00 38.13 C
ATOM 7 C4' G A 525 30.986 122.175 97.213 1.00 37.71 C
ATOM 8 O4' G A 525 32.318 122.667 96.884 1.00 37.86 O
ATOM 9 C3' G A 525 30.749 120.978 96.301 1.00 36.90 C
ATOM 10 O3' G A 525 30.118 121.457 95.109 1.00 37.38 O
ATOM 11 C2' G A 525 32.178 120.556 95.961 1.00 35.96 C
ATOM 12 O2' G A 525 32.270 119.814 94.766 1.00 36.85 O
ATOM 13 C1' G A 525 32.829 121.926 95.801 1.00 36.81 C
ATOM 14 N9 G A 525 34.289 122.024 95.792 1.00 37.21 N
ATOM 15 C8 G A 525 35.162 121.644 96.781 1.00 38.30 C
ATOM 16 N7 G A 525 36.412 121.878 96.483 1.00 36.42 N
ATOM 17 C5 G A 525 36.366 122.444 95.222 1.00 36.05 C
ATOM 18 C6 G A 525 37.407 122.905 94.396 1.00 36.49 C
ATOM 19 O6 G A 525 38.616 122.928 94.629 1.00 36.26 O
ATOM 20 N1 G A 525 36.924 123.390 93.188 1.00 38.46 N
ATOM 21 C2 G A 525 35.601 123.441 92.826 1.00 38.56 C
ATOM 22 N2 G A 525 35.337 123.949 91.615 1.00 37.92 N
ATOM 23 N3 G A 525 34.613 123.026 93.597 1.00 38.38 N
ATOM 24 C4 G A 525 35.065 122.538 94.774 1.00 37.62 C
ATOM 25 P C A 526 28.553 121.825 95.114 1.00 37.49 P
ATOM 26 OP1 C A 526 27.840 120.865 95.978 1.00 37.42 O
ATOM 27 OP2 C A 526 28.148 121.969 93.696 1.00 38.16 O
ATOM 28 O5' C A 526 28.491 123.273 95.771 1.00 36.16 O
TER
ATOM 1 O3' C B 605 26.284 111.222 102.289 1.00 41.17 O
ATOM 2 P G B 606 27.657 111.793 102.903 1.00 42.70 P
ATOM 3 OP1 G B 606 28.585 110.637 102.992 1.00 42.68 O
ATOM 4 OP2 G B 606 27.360 112.597 104.116 1.00 41.24 O
ATOM 5 O5' G B 606 28.186 112.792 101.781 1.00 41.59 O
ATOM 6 C5' G B 606 28.470 112.315 100.452 1.00 40.98 C
ATOM 7 C4' G B 606 28.751 113.472 99.533 1.00 39.18 C
ATOM 8 O4' G B 606 27.572 114.308 99.420 1.00 37.96 O
ATOM 9 C3' G B 606 29.807 114.427 100.036 1.00 39.86 C
ATOM 10 O3' G B 606 31.108 113.928 99.806 1.00 40.93 O
ATOM 11 C2' G B 606 29.493 115.699 99.265 1.00 39.32 C
ATOM 12 O2' G B 606 29.983 115.702 97.941 1.00 39.51 O
ATOM 13 C1' G B 606 27.965 115.660 99.254 1.00 37.66 C
ATOM 14 N9 G B 606 27.385 116.451 100.331 1.00 35.32 N
ATOM 15 C8 G B 606 26.981 116.019 101.568 1.00 34.69 C
ATOM 16 N7 G B 606 26.513 116.981 102.316 1.00 34.61 N
ATOM 17 C5 G B 606 26.614 118.112 101.522 1.00 34.36 C
ATOM 18 C6 G B 606 26.262 119.456 101.791 1.00 35.64 C
ATOM 19 O6 G B 606 25.767 119.939 102.818 1.00 37.32 O
ATOM 20 N1 G B 606 26.541 120.278 100.710 1.00 35.97 N
ATOM 21 C2 G B 606 27.088 119.863 99.526 1.00 36.31 C
ATOM 22 N2 G B 606 27.303 120.816 98.615 1.00 39.83 N
ATOM 23 N3 G B 606 27.408 118.615 99.257 1.00 34.70 N
ATOM 24 C4 G B 606 27.149 117.799 100.295 1.00 34.63 C
ATOM 25 P U B 607 32.264 114.241 100.865 1.00 42.30 P
ATOM 26 OP1 U B 607 33.050 112.997 101.010 1.00 41.85 O
ATOM 27 OP2 U B 607 31.659 114.880 102.069 1.00 43.01 O
ATOM 28 O5' U B 607 33.152 115.348 100.146 1.00 42.25 O
TER
ATOM 2 P G A 525 30.212 123.823 100.366 1.00 41.61 P
ATOM 3 OP1 G A 525 28.954 124.018 99.624 1.00 42.76 O
ATOM 4 OP2 G A 525 30.185 123.128 101.673 1.00 41.84 O
ATOM 5 O5' G A 525 31.255 123.081 99.422 1.00 39.98 O
ATOM 6 C5' G A 525 30.890 121.904 98.691 1.00 38.13 C
ATOM 7 C4' G A 525 30.986 122.175 97.213 1.00 37.71 C
ATOM 8 O4' G A 525 32.318 122.667 96.884 1.00 37.86 O
ATOM 9 C3' G A 525 30.749 120.978 96.301 1.00 36.90 C
ATOM 10 O3' G A 525 30.118 121.457 95.109 1.00 37.38 O
ATOM 11 C2' G A 525 32.178 120.556 95.961 1.00 35.96 C
ATOM 12 O2' G A 525 32.270 119.814 94.766 1.00 36.85 O
ATOM 13 C1' G A 525 32.829 121.926 95.801 1.00 36.81 C
ATOM 14 N9 G A 525 34.289 122.024 95.792 1.00 37.21 N
ATOM 15 C8 G A 525 35.162 121.644 96.781 1.00 38.30 C
ATOM 16 N7 G A 525 36.412 121.878 96.483 1.00 36.42 N
ATOM 17 C5 G A 525 36.366 122.444 95.222 1.00 36.05 C
ATOM 18 C6 G A 525 37.407 122.905 94.396 1.00 36.49 C
ATOM 19 O6 G A 525 38.616 122.928 94.629 1.00 36.26 O
ATOM 20 N1 G A 525 36.924 123.390 93.188 1.00 38.46 N
ATOM 21 C2 G A 525 35.601 123.441 92.826 1.00 38.56 C
ATOM 22 N2 G A 525 35.337 123.949 91.615 1.00 37.92 N
ATOM 23 N3 G A 525 34.613 123.026 93.597 1.00 38.38 N
ATOM 24 C4 G A 525 35.065 122.538 94.774 1.00 37.62 C
ATOM 25 P C A 526 28.553 121.825 95.114 1.00 37.49 P
ATOM 26 OP1 C A 526 27.840 120.865 95.978 1.00 37.42 O
ATOM 27 OP2 C A 526 28.148 121.969 93.696 1.00 38.16 O
ATOM 28 O5' C A 526 28.491 123.273 95.771 1.00 36.16 O
TER
ATOM 1 O3' C B 605 26.284 111.222 102.289 1.00 41.17 O
ATOM 2 P G B 606 27.657 111.793 102.903 1.00 42.70 P
ATOM 3 OP1 G B 606 28.585 110.637 102.992 1.00 42.68 O
ATOM 4 OP2 G B 606 27.360 112.597 104.116 1.00 41.24 O
ATOM 5 O5' G B 606 28.186 112.792 101.781 1.00 41.59 O
ATOM 6 C5' G B 606 28.470 112.315 100.452 1.00 40.98 C
ATOM 7 C4' G B 606 28.751 113.472 99.533 1.00 39.18 C
ATOM 8 O4' G B 606 27.572 114.308 99.420 1.00 37.96 O
ATOM 9 C3' G B 606 29.807 114.427 100.036 1.00 39.86 C
ATOM 10 O3' G B 606 31.108 113.928 99.806 1.00 40.93 O
ATOM 11 C2' G B 606 29.493 115.699 99.265 1.00 39.32 C
ATOM 12 O2' G B 606 29.983 115.702 97.941 1.00 39.51 O
ATOM 13 C1' G B 606 27.965 115.660 99.254 1.00 37.66 C
ATOM 14 N9 G B 606 27.385 116.451 100.331 1.00 35.32 N
ATOM 15 C8 G B 606 26.981 116.019 101.568 1.00 34.69 C
ATOM 16 N7 G B 606 26.513 116.981 102.316 1.00 34.61 N
ATOM 17 C5 G B 606 26.614 118.112 101.522 1.00 34.36 C
ATOM 18 C6 G B 606 26.262 119.456 101.791 1.00 35.64 C
ATOM 19 O6 G B 606 25.767 119.939 102.818 1.00 37.32 O
ATOM 20 N1 G B 606 26.541 120.278 100.710 1.00 35.97 N
ATOM 21 C2 G B 606 27.088 119.863 99.526 1.00 36.31 C
ATOM 22 N2 G B 606 27.303 120.816 98.615 1.00 39.83 N
ATOM 23 N3 G B 606 27.408 118.615 99.257 1.00 34.70 N
ATOM 24 C4 G B 606 27.149 117.799 100.295 1.00 34.63 C
ATOM 25 P U B 607 32.264 114.241 100.865 1.00 42.30 P
ATOM 26 OP1 U B 607 33.050 112.997 101.010 1.00 41.85 O
ATOM 27 OP2 U B 607 31.659 114.880 102.069 1.00 43.01 O
ATOM 28 O5' U B 607 33.152 115.348 100.146 1.00 42.25 O
TER
Atoms:
OP1: (28.954,124.018,99.624)
OP2: (30.185,123.128,101.673)
C3': (30.749,120.978,96.301)
C1': (32.829,121.926,95.801)
C5': (30.890,121.904,98.691)
O6: (38.616,122.928,94.629)
O4': (32.318,122.667,96.884)
C8: (35.162,121.644,96.781)
C2: (35.601,123.441,92.826)
C6: (37.407,122.905,94.396)
C5: (36.366,122.444,95.222)
C4: (35.065,122.538,94.774)
P: (30.212,123.823,100.366)
C4': (30.986,122.175,97.213)
C2': (32.178,120.556,95.961)
O2': (32.270,119.814,94.766)
N1: (36.924,123.390,93.188)
N2: (35.337,123.949,91.615)
N3: (34.613,123.026,93.597)
N7: (36.412,121.878,96.483)
N9: (34.289,122.024,95.792)
O5': (31.255,123.081,99.422)
O3': (30.118,121.457,95.109)
OP2: (30.185,123.128,101.673)
C3': (30.749,120.978,96.301)
C1': (32.829,121.926,95.801)
C5': (30.890,121.904,98.691)
O6: (38.616,122.928,94.629)
O4': (32.318,122.667,96.884)
C8: (35.162,121.644,96.781)
C2: (35.601,123.441,92.826)
C6: (37.407,122.905,94.396)
C5: (36.366,122.444,95.222)
C4: (35.065,122.538,94.774)
P: (30.212,123.823,100.366)
C4': (30.986,122.175,97.213)
C2': (32.178,120.556,95.961)
O2': (32.270,119.814,94.766)
N1: (36.924,123.390,93.188)
N2: (35.337,123.949,91.615)
N3: (34.613,123.026,93.597)
N7: (36.412,121.878,96.483)
N9: (34.289,122.024,95.792)
O5': (31.255,123.081,99.422)
O3': (30.118,121.457,95.109)
OP1: (28.585,110.637,102.992)
OP2: (27.360,112.597,104.116)
C3': (29.807,114.427,100.036)
C1': (27.965,115.660,99.254)
C5': (28.470,112.315,100.452)
O6: (25.767,119.939,102.818)
O4': (27.572,114.308,99.420)
C8: (26.981,116.019,101.568)
C2: (27.088,119.863,99.526)
C6: (26.262,119.456,101.791)
C5: (26.614,118.112,101.522)
C4: (27.149,117.799,100.295)
P: (27.657,111.793,102.903)
C4': (28.751,113.472,99.533)
C2': (29.493,115.699,99.265)
O2': (29.983,115.702,97.941)
N1: (26.541,120.278,100.710)
N2: (27.303,120.816,98.615)
N3: (27.408,118.615,99.257)
N7: (26.513,116.981,102.316)
N9: (27.385,116.451,100.331)
O5': (28.186,112.792,101.781)
O3': (31.108,113.928,99.806)
OP2: (27.360,112.597,104.116)
C3': (29.807,114.427,100.036)
C1': (27.965,115.660,99.254)
C5': (28.470,112.315,100.452)
O6: (25.767,119.939,102.818)
O4': (27.572,114.308,99.420)
C8: (26.981,116.019,101.568)
C2: (27.088,119.863,99.526)
C6: (26.262,119.456,101.791)
C5: (26.614,118.112,101.522)
C4: (27.149,117.799,100.295)
P: (27.657,111.793,102.903)
C4': (28.751,113.472,99.533)
C2': (29.493,115.699,99.265)
O2': (29.983,115.702,97.941)
N1: (26.541,120.278,100.710)
N2: (27.303,120.816,98.615)
N3: (27.408,118.615,99.257)
N7: (26.513,116.981,102.316)
N9: (27.385,116.451,100.331)
O5': (28.186,112.792,101.781)
O3': (31.108,113.928,99.806)
Image (generated by PyMOL):