Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A473:A472
Extra
PDB:
ATOM 1 O3' G A 472 -46.882 -69.038 42.331 1.00 0.79 O
ATOM 2 P U A 473 -46.328 -67.897 41.346 1.00 6.27 P
ATOM 3 OP1 U A 473 -45.535 -66.904 42.151 1.00 6.27 O
ATOM 4 OP2 U A 473 -47.419 -67.427 40.469 1.00 6.27 O
ATOM 5 O5' U A 473 -45.331 -68.706 40.424 1.00 3.28 O
ATOM 6 C5' U A 473 -44.177 -69.313 40.986 1.00 3.28 C
ATOM 7 C4' U A 473 -43.925 -70.635 40.329 1.00 3.28 C
ATOM 8 O4' U A 473 -44.898 -71.617 40.765 1.00 3.28 O
ATOM 9 C3' U A 473 -44.065 -70.594 38.826 1.00 3.28 C
ATOM 10 O3' U A 473 -42.860 -70.130 38.246 1.00 3.28 O
ATOM 11 C2' U A 473 -44.393 -72.040 38.484 1.00 3.28 C
ATOM 12 O2' U A 473 -43.237 -72.848 38.468 1.00 3.28 O
ATOM 13 C1' U A 473 -45.235 -72.462 39.689 1.00 3.28 C
ATOM 14 N1 U A 473 -46.685 -72.371 39.481 1.00 0.79 N
ATOM 15 C2 U A 473 -47.235 -73.054 38.427 1.00 0.79 C
ATOM 16 O2 U A 473 -46.558 -73.624 37.597 1.00 0.79 O
ATOM 17 N3 U A 473 -48.606 -73.024 38.359 1.00 0.79 N
ATOM 18 C4 U A 473 -49.460 -72.358 39.208 1.00 0.79 C
ATOM 19 O4 U A 473 -50.681 -72.552 39.135 1.00 0.79 O
ATOM 20 C5 U A 473 -48.799 -71.613 40.225 1.00 0.79 C
ATOM 21 C6 U A 473 -47.467 -71.650 40.326 1.00 0.79 C
ATOM 22 P A A 474 -42.930 -69.118 37.005 1.00 10.76 P
ATOM 23 OP1 A A 474 -41.531 -68.697 36.707 1.00 24.48 O
ATOM 24 OP2 A A 474 -43.977 -68.100 37.297 1.00 24.48 O
ATOM 25 O5' A A 474 -43.466 -70.028 35.811 1.00 6.11 O
TER
ATOM 1 O3' A B 471 -46.109 -73.122 44.398 1.00 23.78 O
ATOM 2 P G B 472 -45.993 -72.850 45.981 1.00 20.15 P
ATOM 3 OP1 G B 472 -44.627 -72.309 46.218 1.00 20.15 O
ATOM 4 OP2 G B 472 -46.483 -74.011 46.781 1.00 20.15 O
ATOM 5 O5' G B 472 -47.041 -71.672 46.203 1.00 0.79 O
ATOM 6 C5' G B 472 -46.753 -70.332 45.730 1.00 0.79 C
ATOM 7 C4' G B 472 -47.277 -70.145 44.329 1.00 0.79 C
ATOM 8 O4' G B 472 -48.708 -70.386 44.297 1.00 0.79 O
ATOM 9 C3' G B 472 -47.081 -68.772 43.716 1.00 0.79 C
ATOM 10 O3' G B 472 -46.882 -69.038 42.331 1.00 0.79 O
ATOM 11 C2' G B 472 -48.448 -68.139 43.887 1.00 0.79 C
ATOM 12 O2' G B 472 -48.703 -67.180 42.908 1.00 0.79 O
ATOM 13 C1' G B 472 -49.339 -69.338 43.621 1.00 0.79 C
ATOM 14 N9 G B 472 -50.718 -69.251 44.066 1.00 7.39 N
ATOM 15 C8 G B 472 -51.178 -68.791 45.267 1.00 7.39 C
ATOM 16 N7 G B 472 -52.479 -68.836 45.367 1.00 7.34 N
ATOM 17 C5 G B 472 -52.896 -69.355 44.154 1.00 7.33 C
ATOM 18 C6 G B 472 -54.188 -69.614 43.684 1.00 7.35 C
ATOM 19 O6 G B 472 -55.261 -69.422 44.257 1.00 7.38 O
ATOM 20 N1 G B 472 -54.172 -70.142 42.409 1.00 7.37 N
ATOM 21 C2 G B 472 -53.044 -70.381 41.680 1.00 7.32 C
ATOM 22 N2 G B 472 -53.235 -70.911 40.460 1.00 7.32 N
ATOM 23 N3 G B 472 -51.819 -70.129 42.105 1.00 7.24 N
ATOM 24 C4 G B 472 -51.823 -69.621 43.344 1.00 7.32 C
ATOM 25 P U B 473 -46.328 -67.897 41.346 1.00 6.27 P
ATOM 26 OP1 U B 473 -45.535 -66.904 42.151 1.00 6.27 O
ATOM 27 OP2 U B 473 -47.419 -67.427 40.469 1.00 6.27 O
ATOM 28 O5' U B 473 -45.331 -68.706 40.424 1.00 3.28 O
TER
ATOM 2 P U A 473 -46.328 -67.897 41.346 1.00 6.27 P
ATOM 3 OP1 U A 473 -45.535 -66.904 42.151 1.00 6.27 O
ATOM 4 OP2 U A 473 -47.419 -67.427 40.469 1.00 6.27 O
ATOM 5 O5' U A 473 -45.331 -68.706 40.424 1.00 3.28 O
ATOM 6 C5' U A 473 -44.177 -69.313 40.986 1.00 3.28 C
ATOM 7 C4' U A 473 -43.925 -70.635 40.329 1.00 3.28 C
ATOM 8 O4' U A 473 -44.898 -71.617 40.765 1.00 3.28 O
ATOM 9 C3' U A 473 -44.065 -70.594 38.826 1.00 3.28 C
ATOM 10 O3' U A 473 -42.860 -70.130 38.246 1.00 3.28 O
ATOM 11 C2' U A 473 -44.393 -72.040 38.484 1.00 3.28 C
ATOM 12 O2' U A 473 -43.237 -72.848 38.468 1.00 3.28 O
ATOM 13 C1' U A 473 -45.235 -72.462 39.689 1.00 3.28 C
ATOM 14 N1 U A 473 -46.685 -72.371 39.481 1.00 0.79 N
ATOM 15 C2 U A 473 -47.235 -73.054 38.427 1.00 0.79 C
ATOM 16 O2 U A 473 -46.558 -73.624 37.597 1.00 0.79 O
ATOM 17 N3 U A 473 -48.606 -73.024 38.359 1.00 0.79 N
ATOM 18 C4 U A 473 -49.460 -72.358 39.208 1.00 0.79 C
ATOM 19 O4 U A 473 -50.681 -72.552 39.135 1.00 0.79 O
ATOM 20 C5 U A 473 -48.799 -71.613 40.225 1.00 0.79 C
ATOM 21 C6 U A 473 -47.467 -71.650 40.326 1.00 0.79 C
ATOM 22 P A A 474 -42.930 -69.118 37.005 1.00 10.76 P
ATOM 23 OP1 A A 474 -41.531 -68.697 36.707 1.00 24.48 O
ATOM 24 OP2 A A 474 -43.977 -68.100 37.297 1.00 24.48 O
ATOM 25 O5' A A 474 -43.466 -70.028 35.811 1.00 6.11 O
TER
ATOM 1 O3' A B 471 -46.109 -73.122 44.398 1.00 23.78 O
ATOM 2 P G B 472 -45.993 -72.850 45.981 1.00 20.15 P
ATOM 3 OP1 G B 472 -44.627 -72.309 46.218 1.00 20.15 O
ATOM 4 OP2 G B 472 -46.483 -74.011 46.781 1.00 20.15 O
ATOM 5 O5' G B 472 -47.041 -71.672 46.203 1.00 0.79 O
ATOM 6 C5' G B 472 -46.753 -70.332 45.730 1.00 0.79 C
ATOM 7 C4' G B 472 -47.277 -70.145 44.329 1.00 0.79 C
ATOM 8 O4' G B 472 -48.708 -70.386 44.297 1.00 0.79 O
ATOM 9 C3' G B 472 -47.081 -68.772 43.716 1.00 0.79 C
ATOM 10 O3' G B 472 -46.882 -69.038 42.331 1.00 0.79 O
ATOM 11 C2' G B 472 -48.448 -68.139 43.887 1.00 0.79 C
ATOM 12 O2' G B 472 -48.703 -67.180 42.908 1.00 0.79 O
ATOM 13 C1' G B 472 -49.339 -69.338 43.621 1.00 0.79 C
ATOM 14 N9 G B 472 -50.718 -69.251 44.066 1.00 7.39 N
ATOM 15 C8 G B 472 -51.178 -68.791 45.267 1.00 7.39 C
ATOM 16 N7 G B 472 -52.479 -68.836 45.367 1.00 7.34 N
ATOM 17 C5 G B 472 -52.896 -69.355 44.154 1.00 7.33 C
ATOM 18 C6 G B 472 -54.188 -69.614 43.684 1.00 7.35 C
ATOM 19 O6 G B 472 -55.261 -69.422 44.257 1.00 7.38 O
ATOM 20 N1 G B 472 -54.172 -70.142 42.409 1.00 7.37 N
ATOM 21 C2 G B 472 -53.044 -70.381 41.680 1.00 7.32 C
ATOM 22 N2 G B 472 -53.235 -70.911 40.460 1.00 7.32 N
ATOM 23 N3 G B 472 -51.819 -70.129 42.105 1.00 7.24 N
ATOM 24 C4 G B 472 -51.823 -69.621 43.344 1.00 7.32 C
ATOM 25 P U B 473 -46.328 -67.897 41.346 1.00 6.27 P
ATOM 26 OP1 U B 473 -45.535 -66.904 42.151 1.00 6.27 O
ATOM 27 OP2 U B 473 -47.419 -67.427 40.469 1.00 6.27 O
ATOM 28 O5' U B 473 -45.331 -68.706 40.424 1.00 3.28 O
TER
Atoms:
C4: (-49.460,-72.358,39.208)
N3: (-48.606,-73.024,38.359)
OP1: (-45.535,-66.904,42.151)
OP2: (-47.419,-67.427,40.469)
C2: (-47.235,-73.054,38.427)
C1': (-45.235,-72.462,39.689)
C3': (-44.065,-70.594,38.826)
O5': (-45.331,-68.706,40.424)
O4': (-44.898,-71.617,40.765)
C5': (-44.177,-69.313,40.986)
P: (-46.328,-67.897,41.346)
C4': (-43.925,-70.635,40.329)
C2': (-44.393,-72.040,38.484)
O2': (-43.237,-72.848,38.468)
N1: (-46.685,-72.371,39.481)
O4: (-50.681,-72.552,39.135)
O2: (-46.558,-73.624,37.597)
C6: (-47.467,-71.650,40.326)
C5: (-48.799,-71.613,40.225)
O3': (-42.860,-70.130,38.246)
N3: (-48.606,-73.024,38.359)
OP1: (-45.535,-66.904,42.151)
OP2: (-47.419,-67.427,40.469)
C2: (-47.235,-73.054,38.427)
C1': (-45.235,-72.462,39.689)
C3': (-44.065,-70.594,38.826)
O5': (-45.331,-68.706,40.424)
O4': (-44.898,-71.617,40.765)
C5': (-44.177,-69.313,40.986)
P: (-46.328,-67.897,41.346)
C4': (-43.925,-70.635,40.329)
C2': (-44.393,-72.040,38.484)
O2': (-43.237,-72.848,38.468)
N1: (-46.685,-72.371,39.481)
O4: (-50.681,-72.552,39.135)
O2: (-46.558,-73.624,37.597)
C6: (-47.467,-71.650,40.326)
C5: (-48.799,-71.613,40.225)
O3': (-42.860,-70.130,38.246)
OP1: (-44.627,-72.309,46.218)
OP2: (-46.483,-74.011,46.781)
C3': (-47.081,-68.772,43.716)
C1': (-49.339,-69.338,43.621)
C5': (-46.753,-70.332,45.730)
O6: (-55.261,-69.422,44.257)
O4': (-48.708,-70.386,44.297)
C8: (-51.178,-68.791,45.267)
C2: (-53.044,-70.381,41.680)
C6: (-54.188,-69.614,43.684)
C5: (-52.896,-69.355,44.154)
C4: (-51.823,-69.621,43.344)
P: (-45.993,-72.850,45.981)
C4': (-47.277,-70.145,44.329)
C2': (-48.448,-68.139,43.887)
O2': (-48.703,-67.180,42.908)
N1: (-54.172,-70.142,42.409)
N2: (-53.235,-70.911,40.460)
N3: (-51.819,-70.129,42.105)
N7: (-52.479,-68.836,45.367)
N9: (-50.718,-69.251,44.066)
O5': (-47.041,-71.672,46.203)
O3': (-46.882,-69.038,42.331)
OP2: (-46.483,-74.011,46.781)
C3': (-47.081,-68.772,43.716)
C1': (-49.339,-69.338,43.621)
C5': (-46.753,-70.332,45.730)
O6: (-55.261,-69.422,44.257)
O4': (-48.708,-70.386,44.297)
C8: (-51.178,-68.791,45.267)
C2: (-53.044,-70.381,41.680)
C6: (-54.188,-69.614,43.684)
C5: (-52.896,-69.355,44.154)
C4: (-51.823,-69.621,43.344)
P: (-45.993,-72.850,45.981)
C4': (-47.277,-70.145,44.329)
C2': (-48.448,-68.139,43.887)
O2': (-48.703,-67.180,42.908)
N1: (-54.172,-70.142,42.409)
N2: (-53.235,-70.911,40.460)
N3: (-51.819,-70.129,42.105)
N7: (-52.479,-68.836,45.367)
N9: (-50.718,-69.251,44.066)
O5': (-47.041,-71.672,46.203)
O3': (-46.882,-69.038,42.331)
Image (generated by PyMOL):