Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2378:A2379
Extra
PDB:
ATOM 1 O3' C A2377 60.562 118.441 90.331 1.00 36.18 O
ATOM 2 P G A2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 3 OP1 G A2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 4 OP2 G A2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 5 O5' G A2378 59.098 120.316 89.571 1.00 36.19 O
ATOM 6 C5' G A2378 59.383 121.434 88.724 1.00 38.70 C
ATOM 7 C4' G A2378 58.094 122.049 88.251 1.00 41.31 C
ATOM 8 O4' G A2378 57.509 121.252 87.212 1.00 42.08 O
ATOM 9 C3' G A2378 56.985 122.074 89.288 1.00 43.42 C
ATOM 10 O3' G A2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 11 C2' G A2378 55.724 122.241 88.440 1.00 42.90 C
ATOM 12 O2' G A2378 55.396 123.583 88.155 1.00 44.78 O
ATOM 13 C1' G A2378 56.141 121.591 87.122 1.00 42.69 C
ATOM 14 N9 G A2378 55.365 120.420 86.735 1.00 41.39 N
ATOM 15 C8 G A2378 55.357 119.175 87.317 1.00 40.91 C
ATOM 16 N7 G A2378 54.603 118.319 86.683 1.00 41.02 N
ATOM 17 C5 G A2378 54.073 119.050 85.625 1.00 40.23 C
ATOM 18 C6 G A2378 53.214 118.663 84.563 1.00 38.80 C
ATOM 19 O6 G A2378 52.736 117.554 84.326 1.00 38.00 O
ATOM 20 N1 G A2378 52.934 119.736 83.711 1.00 37.58 N
ATOM 21 C2 G A2378 53.420 121.012 83.848 1.00 36.99 C
ATOM 22 N2 G A2378 53.065 121.898 82.912 1.00 32.00 N
ATOM 23 N3 G A2378 54.212 121.385 84.827 1.00 39.32 N
ATOM 24 C4 G A2378 54.508 120.358 85.668 1.00 40.64 C
ATOM 25 P A A2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 26 OP1 A A2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 27 OP2 A A2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 28 O5' A A2379 57.701 122.004 92.331 1.00 48.01 O
TER
ATOM 1 O3' G B2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 2 P A B2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 3 OP1 A B2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 4 OP2 A B2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 5 O5' A B2379 57.701 122.004 92.331 1.00 48.01 O
ATOM 6 C5' A B2379 59.136 122.110 92.325 1.00 44.84 C
ATOM 7 C4' A B2379 59.688 121.952 93.721 1.00 43.44 C
ATOM 8 O4' A B2379 61.137 121.859 93.644 1.00 43.58 O
ATOM 9 C3' A B2379 59.392 123.112 94.654 1.00 42.11 C
ATOM 10 O3' A B2379 59.493 122.643 96.005 1.00 43.43 O
ATOM 11 C2' A B2379 60.603 124.005 94.391 1.00 42.27 C
ATOM 12 O2' A B2379 60.850 124.937 95.423 1.00 42.55 O
ATOM 13 C1' A B2379 61.718 122.963 94.300 1.00 43.18 C
ATOM 14 N9 A B2379 62.918 123.356 93.557 1.00 43.86 N
ATOM 15 C8 A B2379 64.209 123.117 93.942 1.00 44.56 C
ATOM 16 N7 A B2379 65.105 123.562 93.097 1.00 45.02 N
ATOM 17 C5 A B2379 64.352 124.141 92.088 1.00 44.05 C
ATOM 18 C6 A B2379 64.712 124.798 90.908 1.00 43.97 C
ATOM 19 N6 A B2379 65.977 125.010 90.551 1.00 43.31 N
ATOM 20 N1 A B2379 63.720 125.243 90.105 1.00 44.39 N
ATOM 21 C2 A B2379 62.455 125.044 90.491 1.00 43.58 C
ATOM 22 N3 A B2379 61.993 124.450 91.588 1.00 43.48 N
ATOM 23 C4 A B2379 63.004 124.016 92.354 1.00 43.60 C
ATOM 24 P U B2380 58.318 121.770 96.682 1.00 43.91 P
ATOM 25 OP1 U B2380 58.817 120.380 96.898 1.00 41.45 O
ATOM 26 OP2 U B2380 57.029 122.003 95.993 1.00 43.28 O
ATOM 27 O5' U B2380 58.198 122.408 98.122 1.00 43.89 O
TER
ATOM 2 P G A2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 3 OP1 G A2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 4 OP2 G A2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 5 O5' G A2378 59.098 120.316 89.571 1.00 36.19 O
ATOM 6 C5' G A2378 59.383 121.434 88.724 1.00 38.70 C
ATOM 7 C4' G A2378 58.094 122.049 88.251 1.00 41.31 C
ATOM 8 O4' G A2378 57.509 121.252 87.212 1.00 42.08 O
ATOM 9 C3' G A2378 56.985 122.074 89.288 1.00 43.42 C
ATOM 10 O3' G A2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 11 C2' G A2378 55.724 122.241 88.440 1.00 42.90 C
ATOM 12 O2' G A2378 55.396 123.583 88.155 1.00 44.78 O
ATOM 13 C1' G A2378 56.141 121.591 87.122 1.00 42.69 C
ATOM 14 N9 G A2378 55.365 120.420 86.735 1.00 41.39 N
ATOM 15 C8 G A2378 55.357 119.175 87.317 1.00 40.91 C
ATOM 16 N7 G A2378 54.603 118.319 86.683 1.00 41.02 N
ATOM 17 C5 G A2378 54.073 119.050 85.625 1.00 40.23 C
ATOM 18 C6 G A2378 53.214 118.663 84.563 1.00 38.80 C
ATOM 19 O6 G A2378 52.736 117.554 84.326 1.00 38.00 O
ATOM 20 N1 G A2378 52.934 119.736 83.711 1.00 37.58 N
ATOM 21 C2 G A2378 53.420 121.012 83.848 1.00 36.99 C
ATOM 22 N2 G A2378 53.065 121.898 82.912 1.00 32.00 N
ATOM 23 N3 G A2378 54.212 121.385 84.827 1.00 39.32 N
ATOM 24 C4 G A2378 54.508 120.358 85.668 1.00 40.64 C
ATOM 25 P A A2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 26 OP1 A A2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 27 OP2 A A2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 28 O5' A A2379 57.701 122.004 92.331 1.00 48.01 O
TER
ATOM 1 O3' G B2378 57.174 123.203 90.129 1.00 46.45 O
ATOM 2 P A B2379 56.778 123.137 91.688 1.00 49.00 P
ATOM 3 OP1 A B2379 55.355 122.718 91.849 1.00 47.31 O
ATOM 4 OP2 A B2379 57.231 124.446 92.216 1.00 49.89 O
ATOM 5 O5' A B2379 57.701 122.004 92.331 1.00 48.01 O
ATOM 6 C5' A B2379 59.136 122.110 92.325 1.00 44.84 C
ATOM 7 C4' A B2379 59.688 121.952 93.721 1.00 43.44 C
ATOM 8 O4' A B2379 61.137 121.859 93.644 1.00 43.58 O
ATOM 9 C3' A B2379 59.392 123.112 94.654 1.00 42.11 C
ATOM 10 O3' A B2379 59.493 122.643 96.005 1.00 43.43 O
ATOM 11 C2' A B2379 60.603 124.005 94.391 1.00 42.27 C
ATOM 12 O2' A B2379 60.850 124.937 95.423 1.00 42.55 O
ATOM 13 C1' A B2379 61.718 122.963 94.300 1.00 43.18 C
ATOM 14 N9 A B2379 62.918 123.356 93.557 1.00 43.86 N
ATOM 15 C8 A B2379 64.209 123.117 93.942 1.00 44.56 C
ATOM 16 N7 A B2379 65.105 123.562 93.097 1.00 45.02 N
ATOM 17 C5 A B2379 64.352 124.141 92.088 1.00 44.05 C
ATOM 18 C6 A B2379 64.712 124.798 90.908 1.00 43.97 C
ATOM 19 N6 A B2379 65.977 125.010 90.551 1.00 43.31 N
ATOM 20 N1 A B2379 63.720 125.243 90.105 1.00 44.39 N
ATOM 21 C2 A B2379 62.455 125.044 90.491 1.00 43.58 C
ATOM 22 N3 A B2379 61.993 124.450 91.588 1.00 43.48 N
ATOM 23 C4 A B2379 63.004 124.016 92.354 1.00 43.60 C
ATOM 24 P U B2380 58.318 121.770 96.682 1.00 43.91 P
ATOM 25 OP1 U B2380 58.817 120.380 96.898 1.00 41.45 O
ATOM 26 OP2 U B2380 57.029 122.003 95.993 1.00 43.28 O
ATOM 27 O5' U B2380 58.198 122.408 98.122 1.00 43.89 O
TER
Atoms:
OP1: (58.364,117.966,89.235)
OP2: (60.268,118.991,87.884)
C3': (56.985,122.074,89.288)
C1': (56.141,121.591,87.122)
C5': (59.383,121.434,88.724)
O6: (52.736,117.554,84.326)
O4': (57.509,121.252,87.212)
C8: (55.357,119.175,87.317)
C2: (53.420,121.012,83.848)
C6: (53.214,118.663,84.563)
C5: (54.073,119.050,85.625)
C4: (54.508,120.358,85.668)
P: (59.541,118.851,89.160)
C4': (58.094,122.049,88.251)
C2': (55.724,122.241,88.440)
O2': (55.396,123.583,88.155)
N1: (52.934,119.736,83.711)
N2: (53.065,121.898,82.912)
N3: (54.212,121.385,84.827)
N7: (54.603,118.319,86.683)
N9: (55.365,120.420,86.735)
O5': (59.098,120.316,89.571)
O3': (57.174,123.203,90.129)
OP2: (60.268,118.991,87.884)
C3': (56.985,122.074,89.288)
C1': (56.141,121.591,87.122)
C5': (59.383,121.434,88.724)
O6: (52.736,117.554,84.326)
O4': (57.509,121.252,87.212)
C8: (55.357,119.175,87.317)
C2: (53.420,121.012,83.848)
C6: (53.214,118.663,84.563)
C5: (54.073,119.050,85.625)
C4: (54.508,120.358,85.668)
P: (59.541,118.851,89.160)
C4': (58.094,122.049,88.251)
C2': (55.724,122.241,88.440)
O2': (55.396,123.583,88.155)
N1: (52.934,119.736,83.711)
N2: (53.065,121.898,82.912)
N3: (54.212,121.385,84.827)
N7: (54.603,118.319,86.683)
N9: (55.365,120.420,86.735)
O5': (59.098,120.316,89.571)
O3': (57.174,123.203,90.129)
OP1: (55.355,122.718,91.849)
OP2: (57.231,124.446,92.216)
C3': (59.392,123.112,94.654)
C1': (61.718,122.963,94.300)
C5': (59.136,122.110,92.325)
O4': (61.137,121.859,93.644)
C8: (64.209,123.117,93.942)
O2': (60.850,124.937,95.423)
C6: (64.712,124.798,90.908)
C5: (64.352,124.141,92.088)
C4: (63.004,124.016,92.354)
P: (56.778,123.137,91.688)
C4': (59.688,121.952,93.721)
C2': (60.603,124.005,94.391)
C2: (62.455,125.044,90.491)
N1: (63.720,125.243,90.105)
N3: (61.993,124.450,91.588)
N6: (65.977,125.010,90.551)
N7: (65.105,123.562,93.097)
N9: (62.918,123.356,93.557)
O5': (57.701,122.004,92.331)
O3': (59.493,122.643,96.005)
OP2: (57.231,124.446,92.216)
C3': (59.392,123.112,94.654)
C1': (61.718,122.963,94.300)
C5': (59.136,122.110,92.325)
O4': (61.137,121.859,93.644)
C8: (64.209,123.117,93.942)
O2': (60.850,124.937,95.423)
C6: (64.712,124.798,90.908)
C5: (64.352,124.141,92.088)
C4: (63.004,124.016,92.354)
P: (56.778,123.137,91.688)
C4': (59.688,121.952,93.721)
C2': (60.603,124.005,94.391)
C2: (62.455,125.044,90.491)
N1: (63.720,125.243,90.105)
N3: (61.993,124.450,91.588)
N6: (65.977,125.010,90.551)
N7: (65.105,123.562,93.097)
N9: (62.918,123.356,93.557)
O5': (57.701,122.004,92.331)
O3': (59.493,122.643,96.005)
Image (generated by PyMOL):