Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q9A:A9:A8
Extra
PDB:
ATOM 1 O3' G A 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 2 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U A 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U A 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U A 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U A 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U A 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U A 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U A 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U A 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U A 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U A 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U A 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U A 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U A 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U A 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U A 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U A 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A A 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A A 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A A 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A A 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
ATOM 1 O3' A B 7 2.398 -38.527 -10.987 0.47 19.57 O
ATOM 2 N9 G B 8 3.729 -44.511 -10.932 1.00 19.87 N
ATOM 3 C8 G B 8 3.880 -45.192 -9.759 1.00 24.46 C
ATOM 4 N7 G B 8 5.042 -45.791 -9.643 1.00 25.43 N
ATOM 5 C5 G B 8 5.710 -45.487 -10.819 1.00 23.45 C
ATOM 6 C6 G B 8 6.995 -45.835 -11.294 1.00 22.95 C
ATOM 7 O6 G B 8 7.903 -46.540 -10.749 1.00 29.77 O
ATOM 8 N1 G B 8 7.258 -45.306 -12.544 1.00 23.04 N
ATOM 9 C2 G B 8 6.394 -44.531 -13.262 1.00 19.34 C
ATOM 10 N2 G B 8 6.822 -44.103 -14.463 1.00 20.31 N
ATOM 11 N3 G B 8 5.188 -44.195 -12.836 1.00 20.00 N
ATOM 12 C4 G B 8 4.914 -44.702 -11.621 1.00 19.59 C
ATOM 13 P G B 8 1.649 -38.684 -9.561 0.47 18.63 P
ATOM 14 OP1 G B 8 0.202 -38.476 -9.816 0.47 21.95 O
ATOM 15 OP2 G B 8 2.299 -37.937 -8.449 0.47 29.36 O
ATOM 16 O5' G B 8 1.865 -40.237 -9.261 0.47 19.08 O
ATOM 17 C5' G B 8 0.921 -41.247 -9.641 0.47 20.41 C
ATOM 18 C4' G B 8 1.339 -41.846 -10.954 0.47 18.68 C
ATOM 19 O4' G B 8 2.670 -42.424 -10.873 0.47 16.93 O
ATOM 20 C3' G B 8 0.423 -42.963 -11.450 0.47 18.66 C
ATOM 21 O3' G B 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 22 C2' G B 8 1.209 -44.216 -11.032 0.47 19.15 C
ATOM 23 O2' G B 8 0.832 -45.367 -11.753 0.47 19.56 O
ATOM 24 C1' G B 8 2.604 -43.737 -11.417 0.47 18.24 C
ATOM 25 P U B 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 26 OP1 U B 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 27 OP2 U B 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 28 O5' U B 9 -1.025 -42.672 -14.873 1.00 18.47 O
TER
ATOM 2 P U A 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 3 OP1 U A 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 4 OP2 U A 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 5 O5' U A 9 -1.025 -42.672 -14.873 1.00 18.47 O
ATOM 6 C5' U A 9 -1.751 -41.453 -14.588 1.00 18.76 C
ATOM 7 C4' U A 9 -1.367 -40.421 -15.632 1.00 18.35 C
ATOM 8 O4' U A 9 -0.033 -39.952 -15.288 1.00 19.36 O
ATOM 9 C3' U A 9 -1.210 -40.970 -17.048 1.00 19.22 C
ATOM 10 O3' U A 9 -2.456 -40.917 -17.735 1.00 19.98 O
ATOM 11 C2' U A 9 -0.206 -40.003 -17.652 1.00 18.06 C
ATOM 12 O2' U A 9 -0.816 -38.793 -18.074 1.00 19.81 O
ATOM 13 C1' U A 9 0.719 -39.765 -16.472 1.00 17.87 C
ATOM 14 N1 U A 9 1.942 -40.556 -16.357 1.00 16.56 N
ATOM 15 C2 U A 9 2.846 -40.460 -17.399 1.00 15.98 C
ATOM 16 O2 U A 9 2.637 -39.734 -18.370 1.00 17.55 O
ATOM 17 N3 U A 9 3.974 -41.221 -17.239 1.00 16.71 N
ATOM 18 C4 U A 9 4.302 -42.047 -16.176 1.00 16.41 C
ATOM 19 O4 U A 9 5.365 -42.670 -16.202 1.00 16.51 O
ATOM 20 C5 U A 9 3.322 -42.091 -15.132 1.00 16.50 C
ATOM 21 C6 U A 9 2.199 -41.365 -15.272 1.00 16.72 C
ATOM 22 P A A 10 -2.860 -42.069 -18.770 1.00 20.27 P
ATOM 23 OP1 A A 10 -4.207 -41.715 -19.273 1.00 24.87 O
ATOM 24 OP2 A A 10 -2.612 -43.347 -18.045 1.00 20.77 O
ATOM 25 O5' A A 10 -1.801 -42.015 -19.960 1.00 18.21 O
TER
ATOM 1 O3' A B 7 2.398 -38.527 -10.987 0.47 19.57 O
ATOM 2 N9 G B 8 3.729 -44.511 -10.932 1.00 19.87 N
ATOM 3 C8 G B 8 3.880 -45.192 -9.759 1.00 24.46 C
ATOM 4 N7 G B 8 5.042 -45.791 -9.643 1.00 25.43 N
ATOM 5 C5 G B 8 5.710 -45.487 -10.819 1.00 23.45 C
ATOM 6 C6 G B 8 6.995 -45.835 -11.294 1.00 22.95 C
ATOM 7 O6 G B 8 7.903 -46.540 -10.749 1.00 29.77 O
ATOM 8 N1 G B 8 7.258 -45.306 -12.544 1.00 23.04 N
ATOM 9 C2 G B 8 6.394 -44.531 -13.262 1.00 19.34 C
ATOM 10 N2 G B 8 6.822 -44.103 -14.463 1.00 20.31 N
ATOM 11 N3 G B 8 5.188 -44.195 -12.836 1.00 20.00 N
ATOM 12 C4 G B 8 4.914 -44.702 -11.621 1.00 19.59 C
ATOM 13 P G B 8 1.649 -38.684 -9.561 0.47 18.63 P
ATOM 14 OP1 G B 8 0.202 -38.476 -9.816 0.47 21.95 O
ATOM 15 OP2 G B 8 2.299 -37.937 -8.449 0.47 29.36 O
ATOM 16 O5' G B 8 1.865 -40.237 -9.261 0.47 19.08 O
ATOM 17 C5' G B 8 0.921 -41.247 -9.641 0.47 20.41 C
ATOM 18 C4' G B 8 1.339 -41.846 -10.954 0.47 18.68 C
ATOM 19 O4' G B 8 2.670 -42.424 -10.873 0.47 16.93 O
ATOM 20 C3' G B 8 0.423 -42.963 -11.450 0.47 18.66 C
ATOM 21 O3' G B 8 0.428 -42.866 -12.877 0.47 17.69 O
ATOM 22 C2' G B 8 1.209 -44.216 -11.032 0.47 19.15 C
ATOM 23 O2' G B 8 0.832 -45.367 -11.753 0.47 19.56 O
ATOM 24 C1' G B 8 2.604 -43.737 -11.417 0.47 18.24 C
ATOM 25 P U B 9 -0.654 -43.688 -13.705 1.00 18.63 P
ATOM 26 OP1 U B 9 -1.845 -43.941 -12.856 1.00 20.70 O
ATOM 27 OP2 U B 9 0.024 -44.830 -14.377 1.00 18.68 O
ATOM 28 O5' U B 9 -1.025 -42.672 -14.873 1.00 18.47 O
TER
Atoms:
C4: (4.302,-42.047,-16.176)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
N3: (3.974,-41.221,-17.239)
OP1: (-1.845,-43.941,-12.856)
OP2: (0.024,-44.830,-14.377)
C2: (2.846,-40.460,-17.399)
C1': (0.719,-39.765,-16.472)
C3': (-1.210,-40.970,-17.048)
O5': (-1.025,-42.672,-14.873)
O4': (-0.033,-39.952,-15.288)
C5': (-1.751,-41.453,-14.588)
P: (-0.654,-43.688,-13.705)
C4': (-1.367,-40.421,-15.632)
C2': (-0.206,-40.003,-17.652)
O2': (-0.816,-38.793,-18.074)
N1: (1.942,-40.556,-16.357)
O4: (5.365,-42.670,-16.202)
O2: (2.637,-39.734,-18.370)
C6: (2.199,-41.365,-15.272)
C5: (3.322,-42.091,-15.132)
O3': (-2.456,-40.917,-17.735)
OP1: (0.202,-38.476,-9.816)
OP2: (2.299,-37.937,-8.449)
C3': (0.423,-42.963,-11.450)
C1': (2.604,-43.737,-11.417)
C5': (0.921,-41.247,-9.641)
O6: (7.903,-46.540,-10.749)
O4': (2.670,-42.424,-10.873)
C8: (3.880,-45.192,-9.759)
C2: (6.394,-44.531,-13.262)
C6: (6.995,-45.835,-11.294)
C5: (5.710,-45.487,-10.819)
C4: (4.914,-44.702,-11.621)
N9: (3.729,-44.511,-10.932)
C4': (1.339,-41.846,-10.954)
C2': (1.209,-44.216,-11.032)
O2': (0.832,-45.367,-11.753)
N1: (7.258,-45.306,-12.544)
N2: (6.822,-44.103,-14.463)
N3: (5.188,-44.195,-12.836)
N7: (5.042,-45.791,-9.643)
P: (1.649,-38.684,-9.561)
O5': (1.865,-40.237,-9.261)
O3': (0.428,-42.866,-12.877)
OP2: (2.299,-37.937,-8.449)
C3': (0.423,-42.963,-11.450)
C1': (2.604,-43.737,-11.417)
C5': (0.921,-41.247,-9.641)
O6: (7.903,-46.540,-10.749)
O4': (2.670,-42.424,-10.873)
C8: (3.880,-45.192,-9.759)
C2: (6.394,-44.531,-13.262)
C6: (6.995,-45.835,-11.294)
C5: (5.710,-45.487,-10.819)
C4: (4.914,-44.702,-11.621)
N9: (3.729,-44.511,-10.932)
C4': (1.339,-41.846,-10.954)
C2': (1.209,-44.216,-11.032)
O2': (0.832,-45.367,-11.753)
N1: (7.258,-45.306,-12.544)
N2: (6.822,-44.103,-14.463)
N3: (5.188,-44.195,-12.836)
N7: (5.042,-45.791,-9.643)
P: (1.649,-38.684,-9.561)
O5': (1.865,-40.237,-9.261)
O3': (0.428,-42.866,-12.877)
Image (generated by PyMOL):