ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:02378:02379

Extra

PDB:
ATOM 1 O3' C A2377 60.414 117.820 90.208 1.00 44.97 O
ATOM 2 P G A2378 59.709 118.178 88.805 1.00 46.10 P
ATOM 3 OP1 G A2378 58.652 117.166 88.550 1.00 44.82 O
ATOM 4 OP2 G A2378 60.769 118.406 87.786 1.00 45.02 O
ATOM 5 O5' G A2378 58.972 119.560 89.093 1.00 45.62 O
ATOM 6 C5' G A2378 59.256 120.737 88.311 1.00 47.47 C
ATOM 7 C4' G A2378 57.970 121.345 87.810 1.00 49.36 C
ATOM 8 O4' G A2378 57.409 120.523 86.771 1.00 48.89 O
ATOM 9 C3' G A2378 56.852 121.398 88.839 1.00 51.27 C
ATOM 10 O3' G A2378 57.036 122.580 89.615 1.00 57.28 O
ATOM 11 C2' G A2378 55.575 121.455 87.983 1.00 49.79 C
ATOM 12 O2' G A2378 55.085 122.756 87.737 1.00 47.79 O
ATOM 13 C1' G A2378 56.044 120.851 86.653 1.00 49.46 C
ATOM 14 N9 G A2378 55.320 119.699 86.137 1.00 48.51 N
ATOM 15 C8 G A2378 55.357 118.407 86.598 1.00 48.23 C
ATOM 16 N7 G A2378 54.625 117.590 85.887 1.00 50.87 N
ATOM 17 C5 G A2378 54.061 118.399 84.904 1.00 51.51 C
ATOM 18 C6 G A2378 53.173 118.079 83.836 1.00 52.34 C
ATOM 19 O6 G A2378 52.681 116.985 83.546 1.00 53.31 O
ATOM 20 N1 G A2378 52.862 119.202 83.070 1.00 51.91 N
ATOM 21 C2 G A2378 53.329 120.470 83.303 1.00 50.92 C
ATOM 22 N2 G A2378 52.910 121.421 82.454 1.00 48.39 N
ATOM 23 N3 G A2378 54.149 120.783 84.298 1.00 50.91 N
ATOM 24 C4 G A2378 54.474 119.704 85.051 1.00 49.96 C
ATOM 25 P A A2379 56.696 122.583 91.183 1.00 60.23 P
ATOM 26 OP1 A A2379 55.300 122.092 91.336 1.00 62.23 O
ATOM 27 OP2 A A2379 57.061 123.934 91.702 1.00 60.28 O
ATOM 28 O5' A A2379 57.662 121.480 91.815 1.00 61.46 O
TER

ATOM 1 O3' G B2378 57.036 122.580 89.615 1.00 57.28 O
ATOM 2 P A B2379 56.696 122.583 91.183 1.00 60.23 P
ATOM 3 OP1 A B2379 55.300 122.092 91.336 1.00 62.23 O
ATOM 4 OP2 A B2379 57.061 123.934 91.702 1.00 60.28 O
ATOM 5 O5' A B2379 57.662 121.480 91.815 1.00 61.46 O
ATOM 6 C5' A B2379 59.093 121.604 91.742 1.00 62.82 C
ATOM 7 C4' A B2379 59.714 121.291 93.085 1.00 64.81 C
ATOM 8 O4' A B2379 61.157 121.241 92.919 1.00 66.23 O
ATOM 9 C3' A B2379 59.450 122.312 94.197 1.00 65.93 C
ATOM 10 O3' A B2379 59.482 121.680 95.481 1.00 67.81 O
ATOM 11 C2' A B2379 60.666 123.229 94.089 1.00 66.60 C
ATOM 12 O2' A B2379 60.956 123.912 95.296 1.00 65.59 O
ATOM 13 C1' A B2379 61.765 122.221 93.744 1.00 66.42 C
ATOM 14 N9 A B2379 62.906 122.779 93.016 1.00 66.56 N
ATOM 15 C8 A B2379 64.218 122.820 93.424 1.00 67.02 C
ATOM 16 N7 A B2379 65.029 123.364 92.548 1.00 67.21 N
ATOM 17 C5 A B2379 64.196 123.708 91.492 1.00 67.18 C
ATOM 18 C6 A B2379 64.448 124.314 90.254 1.00 67.58 C
ATOM 19 N6 A B2379 65.664 124.693 89.853 1.00 67.85 N
ATOM 20 N1 A B2379 63.395 124.519 89.426 1.00 68.69 N
ATOM 21 C2 A B2379 62.176 124.130 89.830 1.00 68.37 C
ATOM 22 N3 A B2379 61.814 123.542 90.971 1.00 67.65 N
ATOM 23 C4 A B2379 62.884 123.358 91.768 1.00 67.31 C
ATOM 24 P U B2380 58.157 120.990 96.084 1.00 68.53 P
ATOM 25 OP1 U B2380 58.427 119.525 96.197 1.00 67.19 O
ATOM 26 OP2 U B2380 56.991 121.466 95.297 1.00 69.47 O
ATOM 27 O5' U B2380 58.034 121.582 97.561 1.00 69.03 O
TER

Atoms:
OP1: (58.652,117.166,88.550)
OP2: (60.769,118.406,87.786)
C3': (56.852,121.398,88.839)
C1': (56.044,120.851,86.653)
C5': (59.256,120.737,88.311)
O6: (52.681,116.985,83.546)
O4': (57.409,120.523,86.771)
C8: (55.357,118.407,86.598)
C2: (53.329,120.470,83.303)
C6: (53.173,118.079,83.836)
C5: (54.061,118.399,84.904)
C4: (54.474,119.704,85.051)
P: (59.709,118.178,88.805)
C4': (57.970,121.345,87.810)
C2': (55.575,121.455,87.983)
O2': (55.085,122.756,87.737)
N1: (52.862,119.202,83.070)
N2: (52.910,121.421,82.454)
N3: (54.149,120.783,84.298)
N7: (54.625,117.590,85.887)
N9: (55.320,119.699,86.137)
O5': (58.972,119.560,89.093)
O3': (57.036,122.580,89.615)
OP1: (55.300,122.092,91.336)
OP2: (57.061,123.934,91.702)
C3': (59.450,122.312,94.197)
C1': (61.765,122.221,93.744)
C5': (59.093,121.604,91.742)
O4': (61.157,121.241,92.919)
C8: (64.218,122.820,93.424)
O2': (60.956,123.912,95.296)
C6: (64.448,124.314,90.254)
C5: (64.196,123.708,91.492)
C4: (62.884,123.358,91.768)
P: (56.696,122.583,91.183)
C4': (59.714,121.291,93.085)
C2': (60.666,123.229,94.089)
C2: (62.176,124.130,89.830)
N1: (63.395,124.519,89.426)
N3: (61.814,123.542,90.971)
N6: (65.664,124.693,89.853)
N7: (65.029,123.364,92.548)
N9: (62.906,122.779,93.016)
O5': (57.662,121.480,91.815)
O3': (59.482,121.680,95.481)
Image (generated by PyMOL):
PyMOL image
show in jmol