Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02378:02379
Extra
PDB:
ATOM 1 O3' C A2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 2 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 3 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 4 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 5 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
ATOM 6 C5' G A2378 59.393 121.392 88.221 1.00 38.68 C
ATOM 7 C4' G A2378 58.139 121.991 87.643 1.00 41.84 C
ATOM 8 O4' G A2378 57.553 121.062 86.713 1.00 43.10 O
ATOM 9 C3' G A2378 57.006 122.193 88.639 1.00 43.43 C
ATOM 10 O3' G A2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 11 C2' G A2378 55.762 122.248 87.741 1.00 42.00 C
ATOM 12 O2' G A2378 55.440 123.552 87.306 1.00 40.15 O
ATOM 13 C1' G A2378 56.215 121.442 86.514 1.00 43.17 C
ATOM 14 N9 G A2378 55.439 120.283 86.082 1.00 42.93 N
ATOM 15 C8 G A2378 55.434 119.019 86.622 1.00 42.14 C
ATOM 16 N7 G A2378 54.653 118.192 85.978 1.00 41.44 N
ATOM 17 C5 G A2378 54.104 118.958 84.957 1.00 42.14 C
ATOM 18 C6 G A2378 53.180 118.608 83.932 1.00 41.82 C
ATOM 19 O6 G A2378 52.636 117.518 83.726 1.00 41.75 O
ATOM 20 N1 G A2378 52.899 119.691 83.103 1.00 41.38 N
ATOM 21 C2 G A2378 53.428 120.951 83.241 1.00 42.24 C
ATOM 22 N2 G A2378 53.036 121.865 82.341 1.00 38.70 N
ATOM 23 N3 G A2378 54.282 121.292 84.194 1.00 43.21 N
ATOM 24 C4 G A2378 54.575 120.252 85.010 1.00 42.55 C
ATOM 25 P A A2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 26 OP1 A A2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 27 OP2 A A2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 28 O5' A A2379 57.438 122.465 91.707 1.00 46.93 O
TER
ATOM 1 O3' G B2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 2 P A B2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 3 OP1 A B2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 4 OP2 A B2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 5 O5' A B2379 57.438 122.465 91.707 1.00 46.93 O
ATOM 6 C5' A B2379 58.857 122.314 91.718 1.00 46.09 C
ATOM 7 C4' A B2379 59.356 122.005 93.116 1.00 47.21 C
ATOM 8 O4' A B2379 60.806 121.937 93.046 1.00 48.52 O
ATOM 9 C3' A B2379 59.058 123.058 94.187 1.00 46.23 C
ATOM 10 O3' A B2379 59.223 122.487 95.501 1.00 43.74 O
ATOM 11 C2' A B2379 60.241 124.005 94.013 1.00 47.36 C
ATOM 12 O2' A B2379 60.461 124.775 95.179 1.00 46.87 O
ATOM 13 C1' A B2379 61.368 122.989 93.807 1.00 49.08 C
ATOM 14 N9 A B2379 62.594 123.433 93.141 1.00 49.47 N
ATOM 15 C8 A B2379 63.878 123.372 93.639 1.00 49.49 C
ATOM 16 N7 A B2379 64.794 123.786 92.799 1.00 47.75 N
ATOM 17 C5 A B2379 64.068 124.155 91.678 1.00 49.90 C
ATOM 18 C6 A B2379 64.458 124.663 90.436 1.00 50.93 C
ATOM 19 N6 A B2379 65.730 124.879 90.097 1.00 49.56 N
ATOM 20 N1 A B2379 63.484 124.937 89.535 1.00 53.30 N
ATOM 21 C2 A B2379 62.205 124.701 89.876 1.00 51.62 C
ATOM 22 N3 A B2379 61.714 124.213 91.014 1.00 49.43 N
ATOM 23 C4 A B2379 62.709 123.958 91.881 1.00 49.64 C
ATOM 24 P U B2380 58.023 121.700 96.229 1.00 38.53 P
ATOM 25 OP1 U B2380 58.475 120.306 96.420 1.00 36.68 O
ATOM 26 OP2 U B2380 56.745 121.974 95.531 1.00 40.87 O
ATOM 27 O5' U B2380 57.959 122.357 97.675 1.00 39.82 O
TER
ATOM 2 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 3 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 4 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 5 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
ATOM 6 C5' G A2378 59.393 121.392 88.221 1.00 38.68 C
ATOM 7 C4' G A2378 58.139 121.991 87.643 1.00 41.84 C
ATOM 8 O4' G A2378 57.553 121.062 86.713 1.00 43.10 O
ATOM 9 C3' G A2378 57.006 122.193 88.639 1.00 43.43 C
ATOM 10 O3' G A2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 11 C2' G A2378 55.762 122.248 87.741 1.00 42.00 C
ATOM 12 O2' G A2378 55.440 123.552 87.306 1.00 40.15 O
ATOM 13 C1' G A2378 56.215 121.442 86.514 1.00 43.17 C
ATOM 14 N9 G A2378 55.439 120.283 86.082 1.00 42.93 N
ATOM 15 C8 G A2378 55.434 119.019 86.622 1.00 42.14 C
ATOM 16 N7 G A2378 54.653 118.192 85.978 1.00 41.44 N
ATOM 17 C5 G A2378 54.104 118.958 84.957 1.00 42.14 C
ATOM 18 C6 G A2378 53.180 118.608 83.932 1.00 41.82 C
ATOM 19 O6 G A2378 52.636 117.518 83.726 1.00 41.75 O
ATOM 20 N1 G A2378 52.899 119.691 83.103 1.00 41.38 N
ATOM 21 C2 G A2378 53.428 120.951 83.241 1.00 42.24 C
ATOM 22 N2 G A2378 53.036 121.865 82.341 1.00 38.70 N
ATOM 23 N3 G A2378 54.282 121.292 84.194 1.00 43.21 N
ATOM 24 C4 G A2378 54.575 120.252 85.010 1.00 42.55 C
ATOM 25 P A A2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 26 OP1 A A2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 27 OP2 A A2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 28 O5' A A2379 57.438 122.465 91.707 1.00 46.93 O
TER
ATOM 1 O3' G B2378 57.240 123.421 89.335 1.00 47.39 O
ATOM 2 P A B2379 56.736 123.616 90.851 1.00 49.26 P
ATOM 3 OP1 A B2379 55.277 123.354 90.906 1.00 51.76 O
ATOM 4 OP2 A B2379 57.260 124.948 91.255 1.00 50.58 O
ATOM 5 O5' A B2379 57.438 122.465 91.707 1.00 46.93 O
ATOM 6 C5' A B2379 58.857 122.314 91.718 1.00 46.09 C
ATOM 7 C4' A B2379 59.356 122.005 93.116 1.00 47.21 C
ATOM 8 O4' A B2379 60.806 121.937 93.046 1.00 48.52 O
ATOM 9 C3' A B2379 59.058 123.058 94.187 1.00 46.23 C
ATOM 10 O3' A B2379 59.223 122.487 95.501 1.00 43.74 O
ATOM 11 C2' A B2379 60.241 124.005 94.013 1.00 47.36 C
ATOM 12 O2' A B2379 60.461 124.775 95.179 1.00 46.87 O
ATOM 13 C1' A B2379 61.368 122.989 93.807 1.00 49.08 C
ATOM 14 N9 A B2379 62.594 123.433 93.141 1.00 49.47 N
ATOM 15 C8 A B2379 63.878 123.372 93.639 1.00 49.49 C
ATOM 16 N7 A B2379 64.794 123.786 92.799 1.00 47.75 N
ATOM 17 C5 A B2379 64.068 124.155 91.678 1.00 49.90 C
ATOM 18 C6 A B2379 64.458 124.663 90.436 1.00 50.93 C
ATOM 19 N6 A B2379 65.730 124.879 90.097 1.00 49.56 N
ATOM 20 N1 A B2379 63.484 124.937 89.535 1.00 53.30 N
ATOM 21 C2 A B2379 62.205 124.701 89.876 1.00 51.62 C
ATOM 22 N3 A B2379 61.714 124.213 91.014 1.00 49.43 N
ATOM 23 C4 A B2379 62.709 123.958 91.881 1.00 49.64 C
ATOM 24 P U B2380 58.023 121.700 96.229 1.00 38.53 P
ATOM 25 OP1 U B2380 58.475 120.306 96.420 1.00 36.68 O
ATOM 26 OP2 U B2380 56.745 121.974 95.531 1.00 40.87 O
ATOM 27 O5' U B2380 57.959 122.357 97.675 1.00 39.82 O
TER
Atoms:
OP1: (58.199,117.980,88.885)
OP2: (60.204,118.788,87.502)
C3': (57.006,122.193,88.639)
C1': (56.215,121.442,86.514)
C5': (59.393,121.392,88.221)
O6: (52.636,117.518,83.726)
O4': (57.553,121.062,86.713)
C8: (55.434,119.019,86.622)
C2: (53.428,120.951,83.241)
C6: (53.180,118.608,83.932)
C5: (54.104,118.958,84.957)
C4: (54.575,120.252,85.010)
P: (59.428,118.808,88.766)
C4': (58.139,121.991,87.643)
C2': (55.762,122.248,87.741)
O2': (55.440,123.552,87.306)
N1: (52.899,119.691,83.103)
N2: (53.036,121.865,82.341)
N3: (54.282,121.292,84.194)
N7: (54.653,118.192,85.978)
N9: (55.439,120.283,86.082)
O5': (59.046,120.314,89.099)
O3': (57.240,123.421,89.335)
OP2: (60.204,118.788,87.502)
C3': (57.006,122.193,88.639)
C1': (56.215,121.442,86.514)
C5': (59.393,121.392,88.221)
O6: (52.636,117.518,83.726)
O4': (57.553,121.062,86.713)
C8: (55.434,119.019,86.622)
C2: (53.428,120.951,83.241)
C6: (53.180,118.608,83.932)
C5: (54.104,118.958,84.957)
C4: (54.575,120.252,85.010)
P: (59.428,118.808,88.766)
C4': (58.139,121.991,87.643)
C2': (55.762,122.248,87.741)
O2': (55.440,123.552,87.306)
N1: (52.899,119.691,83.103)
N2: (53.036,121.865,82.341)
N3: (54.282,121.292,84.194)
N7: (54.653,118.192,85.978)
N9: (55.439,120.283,86.082)
O5': (59.046,120.314,89.099)
O3': (57.240,123.421,89.335)
OP1: (55.277,123.354,90.906)
OP2: (57.260,124.948,91.255)
C3': (59.058,123.058,94.187)
C1': (61.368,122.989,93.807)
C5': (58.857,122.314,91.718)
O4': (60.806,121.937,93.046)
C8: (63.878,123.372,93.639)
O2': (60.461,124.775,95.179)
C6: (64.458,124.663,90.436)
C5: (64.068,124.155,91.678)
C4: (62.709,123.958,91.881)
P: (56.736,123.616,90.851)
C4': (59.356,122.005,93.116)
C2': (60.241,124.005,94.013)
C2: (62.205,124.701,89.876)
N1: (63.484,124.937,89.535)
N3: (61.714,124.213,91.014)
N6: (65.730,124.879,90.097)
N7: (64.794,123.786,92.799)
N9: (62.594,123.433,93.141)
O5': (57.438,122.465,91.707)
O3': (59.223,122.487,95.501)
OP2: (57.260,124.948,91.255)
C3': (59.058,123.058,94.187)
C1': (61.368,122.989,93.807)
C5': (58.857,122.314,91.718)
O4': (60.806,121.937,93.046)
C8: (63.878,123.372,93.639)
O2': (60.461,124.775,95.179)
C6: (64.458,124.663,90.436)
C5: (64.068,124.155,91.678)
C4: (62.709,123.958,91.881)
P: (56.736,123.616,90.851)
C4': (59.356,122.005,93.116)
C2': (60.241,124.005,94.013)
C2: (62.205,124.701,89.876)
N1: (63.484,124.937,89.535)
N3: (61.714,124.213,91.014)
N6: (65.730,124.879,90.097)
N7: (64.794,123.786,92.799)
N9: (62.594,123.433,93.141)
O5': (57.438,122.465,91.707)
O3': (59.223,122.487,95.501)
Image (generated by PyMOL):