Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02378:02379
Extra
PDB:
ATOM 1 O3' C A2377 60.457 118.209 90.051 1.00 35.02 O
ATOM 2 P G A2378 59.487 118.466 88.808 1.00 35.81 P
ATOM 3 OP1 G A2378 58.393 117.459 88.878 1.00 36.21 O
ATOM 4 OP2 G A2378 60.312 118.569 87.581 1.00 36.39 O
ATOM 5 O5' G A2378 58.864 119.890 89.126 1.00 34.02 O
ATOM 6 C5' G A2378 59.241 121.053 88.385 1.00 34.59 C
ATOM 7 C4' G A2378 58.009 121.732 87.847 1.00 37.21 C
ATOM 8 O4' G A2378 57.459 120.948 86.774 1.00 37.67 O
ATOM 9 C3' G A2378 56.845 121.828 88.818 1.00 37.46 C
ATOM 10 O3' G A2378 57.048 122.972 89.649 1.00 41.40 O
ATOM 11 C2' G A2378 55.651 122.027 87.884 1.00 36.49 C
ATOM 12 O2' G A2378 55.458 123.387 87.569 1.00 37.55 O
ATOM 13 C1' G A2378 56.109 121.307 86.608 1.00 37.24 C
ATOM 14 N9 G A2378 55.369 120.132 86.160 1.00 38.02 N
ATOM 15 C8 G A2378 55.397 118.870 86.702 1.00 38.21 C
ATOM 16 N7 G A2378 54.662 118.013 86.046 1.00 37.73 N
ATOM 17 C5 G A2378 54.107 118.754 85.013 1.00 38.76 C
ATOM 18 C6 G A2378 53.225 118.363 83.971 1.00 40.07 C
ATOM 19 O6 G A2378 52.736 117.243 83.754 1.00 40.72 O
ATOM 20 N1 G A2378 52.914 119.433 83.135 1.00 38.44 N
ATOM 21 C2 G A2378 53.383 120.715 83.287 1.00 37.29 C
ATOM 22 N2 G A2378 52.967 121.612 82.381 1.00 35.34 N
ATOM 23 N3 G A2378 54.200 121.092 84.256 1.00 37.78 N
ATOM 24 C4 G A2378 54.522 120.067 85.074 1.00 37.73 C
ATOM 25 P A A2379 56.674 122.928 91.213 1.00 44.08 P
ATOM 26 OP1 A A2379 55.303 122.379 91.356 1.00 46.93 O
ATOM 27 OP2 A A2379 56.985 124.273 91.756 1.00 43.68 O
ATOM 28 O5' A A2379 57.675 121.873 91.853 1.00 43.55 O
TER
ATOM 1 O3' G B2378 57.048 122.972 89.649 1.00 41.40 O
ATOM 2 P A B2379 56.674 122.928 91.213 1.00 44.08 P
ATOM 3 OP1 A B2379 55.303 122.379 91.356 1.00 46.93 O
ATOM 4 OP2 A B2379 56.985 124.273 91.756 1.00 43.68 O
ATOM 5 O5' A B2379 57.675 121.873 91.853 1.00 43.55 O
ATOM 6 C5' A B2379 59.082 122.020 91.701 1.00 46.77 C
ATOM 7 C4' A B2379 59.765 121.924 93.040 1.00 49.30 C
ATOM 8 O4' A B2379 61.186 122.082 92.812 1.00 50.21 O
ATOM 9 C3' A B2379 59.381 123.004 94.049 1.00 50.80 C
ATOM 10 O3' A B2379 59.602 122.528 95.388 1.00 54.15 O
ATOM 11 C2' A B2379 60.402 124.094 93.738 1.00 50.62 C
ATOM 12 O2' A B2379 60.621 124.963 94.829 1.00 51.79 O
ATOM 13 C1' A B2379 61.643 123.248 93.462 1.00 51.46 C
ATOM 14 N9 A B2379 62.695 123.842 92.634 1.00 51.83 N
ATOM 15 C8 A B2379 64.000 124.065 93.008 1.00 51.38 C
ATOM 16 N7 A B2379 64.752 124.545 92.052 1.00 49.39 N
ATOM 17 C5 A B2379 63.886 124.662 90.980 1.00 50.56 C
ATOM 18 C6 A B2379 64.081 125.105 89.677 1.00 51.74 C
ATOM 19 N6 A B2379 65.267 125.503 89.216 1.00 52.66 N
ATOM 20 N1 A B2379 63.010 125.120 88.849 1.00 52.88 N
ATOM 21 C2 A B2379 61.827 124.697 89.324 1.00 52.34 C
ATOM 22 N3 A B2379 61.522 124.241 90.537 1.00 50.10 N
ATOM 23 C4 A B2379 62.609 124.250 91.326 1.00 51.04 C
ATOM 24 P U B2380 58.569 121.490 96.076 1.00 55.84 P
ATOM 25 OP1 U B2380 59.230 120.153 96.157 1.00 50.49 O
ATOM 26 OP2 U B2380 57.245 121.633 95.403 1.00 54.70 O
ATOM 27 O5' U B2380 58.400 122.022 97.569 1.00 52.90 O
TER
ATOM 2 P G A2378 59.487 118.466 88.808 1.00 35.81 P
ATOM 3 OP1 G A2378 58.393 117.459 88.878 1.00 36.21 O
ATOM 4 OP2 G A2378 60.312 118.569 87.581 1.00 36.39 O
ATOM 5 O5' G A2378 58.864 119.890 89.126 1.00 34.02 O
ATOM 6 C5' G A2378 59.241 121.053 88.385 1.00 34.59 C
ATOM 7 C4' G A2378 58.009 121.732 87.847 1.00 37.21 C
ATOM 8 O4' G A2378 57.459 120.948 86.774 1.00 37.67 O
ATOM 9 C3' G A2378 56.845 121.828 88.818 1.00 37.46 C
ATOM 10 O3' G A2378 57.048 122.972 89.649 1.00 41.40 O
ATOM 11 C2' G A2378 55.651 122.027 87.884 1.00 36.49 C
ATOM 12 O2' G A2378 55.458 123.387 87.569 1.00 37.55 O
ATOM 13 C1' G A2378 56.109 121.307 86.608 1.00 37.24 C
ATOM 14 N9 G A2378 55.369 120.132 86.160 1.00 38.02 N
ATOM 15 C8 G A2378 55.397 118.870 86.702 1.00 38.21 C
ATOM 16 N7 G A2378 54.662 118.013 86.046 1.00 37.73 N
ATOM 17 C5 G A2378 54.107 118.754 85.013 1.00 38.76 C
ATOM 18 C6 G A2378 53.225 118.363 83.971 1.00 40.07 C
ATOM 19 O6 G A2378 52.736 117.243 83.754 1.00 40.72 O
ATOM 20 N1 G A2378 52.914 119.433 83.135 1.00 38.44 N
ATOM 21 C2 G A2378 53.383 120.715 83.287 1.00 37.29 C
ATOM 22 N2 G A2378 52.967 121.612 82.381 1.00 35.34 N
ATOM 23 N3 G A2378 54.200 121.092 84.256 1.00 37.78 N
ATOM 24 C4 G A2378 54.522 120.067 85.074 1.00 37.73 C
ATOM 25 P A A2379 56.674 122.928 91.213 1.00 44.08 P
ATOM 26 OP1 A A2379 55.303 122.379 91.356 1.00 46.93 O
ATOM 27 OP2 A A2379 56.985 124.273 91.756 1.00 43.68 O
ATOM 28 O5' A A2379 57.675 121.873 91.853 1.00 43.55 O
TER
ATOM 1 O3' G B2378 57.048 122.972 89.649 1.00 41.40 O
ATOM 2 P A B2379 56.674 122.928 91.213 1.00 44.08 P
ATOM 3 OP1 A B2379 55.303 122.379 91.356 1.00 46.93 O
ATOM 4 OP2 A B2379 56.985 124.273 91.756 1.00 43.68 O
ATOM 5 O5' A B2379 57.675 121.873 91.853 1.00 43.55 O
ATOM 6 C5' A B2379 59.082 122.020 91.701 1.00 46.77 C
ATOM 7 C4' A B2379 59.765 121.924 93.040 1.00 49.30 C
ATOM 8 O4' A B2379 61.186 122.082 92.812 1.00 50.21 O
ATOM 9 C3' A B2379 59.381 123.004 94.049 1.00 50.80 C
ATOM 10 O3' A B2379 59.602 122.528 95.388 1.00 54.15 O
ATOM 11 C2' A B2379 60.402 124.094 93.738 1.00 50.62 C
ATOM 12 O2' A B2379 60.621 124.963 94.829 1.00 51.79 O
ATOM 13 C1' A B2379 61.643 123.248 93.462 1.00 51.46 C
ATOM 14 N9 A B2379 62.695 123.842 92.634 1.00 51.83 N
ATOM 15 C8 A B2379 64.000 124.065 93.008 1.00 51.38 C
ATOM 16 N7 A B2379 64.752 124.545 92.052 1.00 49.39 N
ATOM 17 C5 A B2379 63.886 124.662 90.980 1.00 50.56 C
ATOM 18 C6 A B2379 64.081 125.105 89.677 1.00 51.74 C
ATOM 19 N6 A B2379 65.267 125.503 89.216 1.00 52.66 N
ATOM 20 N1 A B2379 63.010 125.120 88.849 1.00 52.88 N
ATOM 21 C2 A B2379 61.827 124.697 89.324 1.00 52.34 C
ATOM 22 N3 A B2379 61.522 124.241 90.537 1.00 50.10 N
ATOM 23 C4 A B2379 62.609 124.250 91.326 1.00 51.04 C
ATOM 24 P U B2380 58.569 121.490 96.076 1.00 55.84 P
ATOM 25 OP1 U B2380 59.230 120.153 96.157 1.00 50.49 O
ATOM 26 OP2 U B2380 57.245 121.633 95.403 1.00 54.70 O
ATOM 27 O5' U B2380 58.400 122.022 97.569 1.00 52.90 O
TER
Atoms:
OP1: (58.393,117.459,88.878)
OP2: (60.312,118.569,87.581)
C3': (56.845,121.828,88.818)
C1': (56.109,121.307,86.608)
C5': (59.241,121.053,88.385)
O6: (52.736,117.243,83.754)
O4': (57.459,120.948,86.774)
C8: (55.397,118.870,86.702)
C2: (53.383,120.715,83.287)
C6: (53.225,118.363,83.971)
C5: (54.107,118.754,85.013)
C4: (54.522,120.067,85.074)
P: (59.487,118.466,88.808)
C4': (58.009,121.732,87.847)
C2': (55.651,122.027,87.884)
O2': (55.458,123.387,87.569)
N1: (52.914,119.433,83.135)
N2: (52.967,121.612,82.381)
N3: (54.200,121.092,84.256)
N7: (54.662,118.013,86.046)
N9: (55.369,120.132,86.160)
O5': (58.864,119.890,89.126)
O3': (57.048,122.972,89.649)
OP2: (60.312,118.569,87.581)
C3': (56.845,121.828,88.818)
C1': (56.109,121.307,86.608)
C5': (59.241,121.053,88.385)
O6: (52.736,117.243,83.754)
O4': (57.459,120.948,86.774)
C8: (55.397,118.870,86.702)
C2: (53.383,120.715,83.287)
C6: (53.225,118.363,83.971)
C5: (54.107,118.754,85.013)
C4: (54.522,120.067,85.074)
P: (59.487,118.466,88.808)
C4': (58.009,121.732,87.847)
C2': (55.651,122.027,87.884)
O2': (55.458,123.387,87.569)
N1: (52.914,119.433,83.135)
N2: (52.967,121.612,82.381)
N3: (54.200,121.092,84.256)
N7: (54.662,118.013,86.046)
N9: (55.369,120.132,86.160)
O5': (58.864,119.890,89.126)
O3': (57.048,122.972,89.649)
OP1: (55.303,122.379,91.356)
OP2: (56.985,124.273,91.756)
C3': (59.381,123.004,94.049)
C1': (61.643,123.248,93.462)
C5': (59.082,122.020,91.701)
O4': (61.186,122.082,92.812)
C8: (64.000,124.065,93.008)
O2': (60.621,124.963,94.829)
C6: (64.081,125.105,89.677)
C5: (63.886,124.662,90.980)
C4: (62.609,124.250,91.326)
P: (56.674,122.928,91.213)
C4': (59.765,121.924,93.040)
C2': (60.402,124.094,93.738)
C2: (61.827,124.697,89.324)
N1: (63.010,125.120,88.849)
N3: (61.522,124.241,90.537)
N6: (65.267,125.503,89.216)
N7: (64.752,124.545,92.052)
N9: (62.695,123.842,92.634)
O5': (57.675,121.873,91.853)
O3': (59.602,122.528,95.388)
OP2: (56.985,124.273,91.756)
C3': (59.381,123.004,94.049)
C1': (61.643,123.248,93.462)
C5': (59.082,122.020,91.701)
O4': (61.186,122.082,92.812)
C8: (64.000,124.065,93.008)
O2': (60.621,124.963,94.829)
C6: (64.081,125.105,89.677)
C5: (63.886,124.662,90.980)
C4: (62.609,124.250,91.326)
P: (56.674,122.928,91.213)
C4': (59.765,121.924,93.040)
C2': (60.402,124.094,93.738)
C2: (61.827,124.697,89.324)
N1: (63.010,125.120,88.849)
N3: (61.522,124.241,90.537)
N6: (65.267,125.503,89.216)
N7: (64.752,124.545,92.052)
N9: (62.695,123.842,92.634)
O5': (57.675,121.873,91.853)
O3': (59.602,122.528,95.388)
Image (generated by PyMOL):