ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RW6:F40:F39

Extra

PDB:
ATOM 1 O3' A A 39 -20.209 15.742 -75.746 1.00 45.97 O
ATOM 2 P U A 40 -19.502 14.314 -75.614 1.00 51.25 P
ATOM 3 OP1 U A 40 -18.357 14.219 -76.554 1.00 47.37 O
ATOM 4 OP2 U A 40 -20.613 13.336 -75.689 1.00 43.14 O
ATOM 5 O5' U A 40 -18.913 14.341 -74.128 1.00 44.49 O
ATOM 6 C5' U A 40 -17.674 14.971 -73.819 1.00 36.29 C
ATOM 7 C4' U A 40 -17.445 14.867 -72.315 1.00 42.56 C
ATOM 8 O4' U A 40 -18.514 15.562 -71.620 1.00 43.24 O
ATOM 9 C3' U A 40 -17.510 13.480 -71.693 1.00 39.17 C
ATOM 10 O3' U A 40 -16.262 12.832 -71.801 1.00 43.77 O
ATOM 11 C2' U A 40 -17.766 13.838 -70.239 1.00 35.44 C
ATOM 12 O2' U A 40 -16.631 14.406 -69.623 1.00 37.44 O
ATOM 13 C1' U A 40 -18.811 14.914 -70.402 1.00 36.63 C
ATOM 14 N1 U A 40 -20.204 14.405 -70.437 1.00 36.09 N
ATOM 15 C2 U A 40 -20.771 14.067 -69.242 1.00 33.94 C
ATOM 16 O2 U A 40 -20.143 14.165 -68.204 1.00 33.82 O
ATOM 17 N3 U A 40 -22.066 13.611 -69.317 1.00 32.04 N
ATOM 18 C4 U A 40 -22.840 13.467 -70.446 1.00 32.50 C
ATOM 19 O4 U A 40 -23.998 13.051 -70.366 1.00 28.00 O
ATOM 20 C5 U A 40 -22.173 13.862 -71.666 1.00 38.00 C
ATOM 21 C6 U A 40 -20.909 14.307 -71.617 1.00 37.97 C
ATOM 22 P C A 41 -16.199 11.236 -71.879 1.00 46.45 P
ATOM 23 OP1 C A 41 -14.821 10.939 -72.340 1.00 48.20 O
ATOM 24 OP2 C A 41 -17.399 10.729 -72.611 1.00 32.80 O
ATOM 25 O5' C A 41 -16.295 10.785 -70.346 1.00 40.56 O
TER

ATOM 1 O3' A B 38 -25.196 13.377 -74.262 1.00 35.89 O
ATOM 2 P A B 39 -25.293 14.732 -75.097 1.00 42.85 P
ATOM 3 OP1 A B 39 -25.763 15.809 -74.191 1.00 45.82 O
ATOM 4 OP2 A B 39 -26.047 14.440 -76.349 1.00 29.91 O
ATOM 5 O5' A B 39 -23.736 15.027 -75.386 1.00 37.57 O
ATOM 6 C5' A B 39 -23.329 16.133 -76.206 1.00 40.58 C
ATOM 7 C4' A B 39 -22.253 16.952 -75.513 1.00 40.66 C
ATOM 8 O4' A B 39 -22.834 17.733 -74.446 1.00 34.07 O
ATOM 9 C3' A B 39 -21.190 16.131 -74.804 1.00 41.34 C
ATOM 10 O3' A B 39 -20.209 15.742 -75.746 1.00 45.97 O
ATOM 11 C2' A B 39 -20.613 17.180 -73.874 1.00 39.66 C
ATOM 12 O2' A B 39 -19.842 18.085 -74.625 1.00 37.86 O
ATOM 13 C1' A B 39 -21.870 17.907 -73.418 1.00 37.37 C
ATOM 14 N9 A B 39 -22.393 17.523 -72.094 1.00 34.31 N
ATOM 15 C8 A B 39 -23.632 17.024 -71.776 1.00 37.03 C
ATOM 16 N7 A B 39 -23.806 16.780 -70.489 1.00 34.86 N
ATOM 17 C5 A B 39 -22.596 17.159 -69.918 1.00 34.65 C
ATOM 18 C6 A B 39 -22.118 17.154 -68.584 1.00 36.08 C
ATOM 19 N6 A B 39 -22.839 16.750 -67.535 1.00 35.94 N
ATOM 20 N1 A B 39 -20.857 17.583 -68.358 1.00 37.67 N
ATOM 21 C2 A B 39 -20.134 17.994 -69.410 1.00 36.28 C
ATOM 22 N3 A B 39 -20.467 18.048 -70.700 1.00 37.53 N
ATOM 23 C4 A B 39 -21.721 17.610 -70.893 1.00 33.82 C
ATOM 24 P U B 40 -19.502 14.314 -75.614 1.00 51.25 P
ATOM 25 OP1 U B 40 -18.357 14.219 -76.554 1.00 47.37 O
ATOM 26 OP2 U B 40 -20.613 13.336 -75.689 1.00 43.14 O
ATOM 27 O5' U B 40 -18.913 14.341 -74.128 1.00 44.49 O
TER

Atoms:
C4: (-22.840,13.467,-70.446)
N3: (-22.066,13.611,-69.317)
OP1: (-18.357,14.219,-76.554)
OP2: (-20.613,13.336,-75.689)
C2: (-20.771,14.067,-69.242)
C1': (-18.811,14.914,-70.402)
C3': (-17.510,13.480,-71.693)
O5': (-18.913,14.341,-74.128)
O4': (-18.514,15.562,-71.620)
C5': (-17.674,14.971,-73.819)
P: (-19.502,14.314,-75.614)
C4': (-17.445,14.867,-72.315)
C2': (-17.766,13.838,-70.239)
O2': (-16.631,14.406,-69.623)
N1: (-20.204,14.405,-70.437)
O4: (-23.998,13.051,-70.366)
O2: (-20.143,14.165,-68.204)
C6: (-20.909,14.307,-71.617)
C5: (-22.173,13.862,-71.666)
O3': (-16.262,12.832,-71.801)
OP1: (-25.763,15.809,-74.191)
OP2: (-26.047,14.440,-76.349)
C3': (-21.190,16.131,-74.804)
C1': (-21.870,17.907,-73.418)
C5': (-23.329,16.133,-76.206)
O4': (-22.834,17.733,-74.446)
C8: (-23.632,17.024,-71.776)
O2': (-19.842,18.085,-74.625)
C6: (-22.118,17.154,-68.584)
C5: (-22.596,17.159,-69.918)
C4: (-21.721,17.610,-70.893)
P: (-25.293,14.732,-75.097)
C4': (-22.253,16.952,-75.513)
C2': (-20.613,17.180,-73.874)
C2: (-20.134,17.994,-69.410)
N1: (-20.857,17.583,-68.358)
N3: (-20.467,18.048,-70.700)
N6: (-22.839,16.750,-67.535)
N7: (-23.806,16.780,-70.489)
N9: (-22.393,17.523,-72.094)
O5': (-23.736,15.027,-75.386)
O3': (-20.209,15.742,-75.746)
Image (generated by PyMOL):
PyMOL image
show in jmol