Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3TRA:A39:A38
Extra
PDB:
ATOM 1 O3' G A 38 5.686 20.665 -22.754 1.00 15.43 O
ATOM 2 P U A 39 6.319 20.570 -21.274 1.00 27.62 P
ATOM 3 OP1 U A 39 7.568 21.406 -21.214 1.00 14.09 O
ATOM 4 OP2 U A 39 6.543 19.122 -21.065 1.00 6.95 O
ATOM 5 O5' U A 39 5.168 21.223 -20.377 1.00 15.75 O
ATOM 6 C5' U A 39 4.420 22.304 -20.990 1.00 10.30 C
ATOM 7 C4' U A 39 2.961 22.073 -20.676 1.00 10.58 C
ATOM 8 O4' U A 39 2.400 21.155 -21.618 1.00 9.70 O
ATOM 9 C3' U A 39 2.683 21.440 -19.315 1.00 11.32 C
ATOM 10 O3' U A 39 2.714 22.365 -18.224 1.00 9.42 O
ATOM 11 C2' U A 39 1.309 20.822 -19.540 1.00 7.23 C
ATOM 12 O2' U A 39 0.350 21.855 -19.390 1.00 9.05 O
ATOM 13 C1' U A 39 1.399 20.373 -20.990 1.00 3.31 C
ATOM 14 N1 U A 39 1.688 18.924 -20.945 1.00 3.59 N
ATOM 15 C2 U A 39 0.615 18.095 -20.646 1.00 2.68 C
ATOM 16 O2 U A 39 -0.501 18.557 -20.437 1.00 10.60 O
ATOM 17 N3 U A 39 0.838 16.748 -20.601 1.00 0.00 N
ATOM 18 C4 U A 39 2.074 16.218 -20.825 1.00 6.49 C
ATOM 19 O4 U A 39 2.177 14.953 -20.751 1.00 13.77 O
ATOM 20 C5 U A 39 3.166 17.082 -21.124 1.00 6.43 C
ATOM 21 C6 U A 39 2.925 18.401 -21.169 1.00 6.06 C
ATOM 22 P G A 40 2.961 21.712 -16.759 1.00 10.85 P
ATOM 23 OP1 G A 40 3.437 22.726 -15.772 1.00 5.01 O
ATOM 24 OP2 G A 40 3.938 20.624 -17.013 1.00 9.17 O
ATOM 25 O5' G A 40 1.502 21.175 -16.355 1.00 0.00 O
TER
ATOM 1 O3' C B 37 8.074 15.082 -25.729 1.00 20.21 O
ATOM 2 P G B 38 8.032 15.762 -24.279 1.00 31.38 P
ATOM 3 OP1 G B 38 9.407 16.259 -23.920 1.00 22.31 O
ATOM 4 OP2 G B 38 7.586 14.640 -23.397 1.00 15.16 O
ATOM 5 O5' G B 38 7.007 16.980 -24.383 1.00 14.61 O
ATOM 6 C5' G B 38 7.447 18.360 -24.324 1.00 7.17 C
ATOM 7 C4' G B 38 6.247 19.210 -24.682 1.00 14.03 C
ATOM 8 O4' G B 38 5.439 18.496 -25.609 1.00 6.36 O
ATOM 9 C3' G B 38 5.294 19.550 -23.546 1.00 17.79 C
ATOM 10 O3' G B 38 5.686 20.665 -22.754 1.00 15.43 O
ATOM 11 C2' G B 38 3.980 19.822 -24.279 1.00 12.40 C
ATOM 12 O2' G B 38 4.034 21.162 -24.742 1.00 14.01 O
ATOM 13 C1' G B 38 4.058 18.816 -25.415 1.00 10.46 C
ATOM 14 N9 G B 38 3.274 17.619 -25.071 1.00 8.85 N
ATOM 15 C8 G B 38 3.660 16.306 -25.146 1.00 11.22 C
ATOM 16 N7 G B 38 2.732 15.463 -24.787 1.00 13.22 N
ATOM 17 C5 G B 38 1.652 16.272 -24.443 1.00 11.44 C
ATOM 18 C6 G B 38 0.350 15.966 -23.980 1.00 13.75 C
ATOM 19 O6 G B 38 -0.127 14.844 -23.756 1.00 10.04 O
ATOM 20 N1 G B 38 -0.446 17.061 -23.756 1.00 10.87 N
ATOM 21 C2 G B 38 -0.012 18.326 -23.965 1.00 9.43 C
ATOM 22 N2 G B 38 -0.905 19.292 -23.696 1.00 14.77 N
ATOM 23 N3 G B 38 1.200 18.680 -24.398 1.00 11.68 N
ATOM 24 C4 G B 38 1.978 17.605 -24.623 1.00 10.35 C
ATOM 25 P U B 39 6.319 20.570 -21.274 1.00 27.62 P
ATOM 26 OP1 U B 39 7.568 21.406 -21.214 1.00 14.09 O
ATOM 27 OP2 U B 39 6.543 19.122 -21.065 1.00 6.95 O
ATOM 28 O5' U B 39 5.168 21.223 -20.377 1.00 15.75 O
TER
ATOM 2 P U A 39 6.319 20.570 -21.274 1.00 27.62 P
ATOM 3 OP1 U A 39 7.568 21.406 -21.214 1.00 14.09 O
ATOM 4 OP2 U A 39 6.543 19.122 -21.065 1.00 6.95 O
ATOM 5 O5' U A 39 5.168 21.223 -20.377 1.00 15.75 O
ATOM 6 C5' U A 39 4.420 22.304 -20.990 1.00 10.30 C
ATOM 7 C4' U A 39 2.961 22.073 -20.676 1.00 10.58 C
ATOM 8 O4' U A 39 2.400 21.155 -21.618 1.00 9.70 O
ATOM 9 C3' U A 39 2.683 21.440 -19.315 1.00 11.32 C
ATOM 10 O3' U A 39 2.714 22.365 -18.224 1.00 9.42 O
ATOM 11 C2' U A 39 1.309 20.822 -19.540 1.00 7.23 C
ATOM 12 O2' U A 39 0.350 21.855 -19.390 1.00 9.05 O
ATOM 13 C1' U A 39 1.399 20.373 -20.990 1.00 3.31 C
ATOM 14 N1 U A 39 1.688 18.924 -20.945 1.00 3.59 N
ATOM 15 C2 U A 39 0.615 18.095 -20.646 1.00 2.68 C
ATOM 16 O2 U A 39 -0.501 18.557 -20.437 1.00 10.60 O
ATOM 17 N3 U A 39 0.838 16.748 -20.601 1.00 0.00 N
ATOM 18 C4 U A 39 2.074 16.218 -20.825 1.00 6.49 C
ATOM 19 O4 U A 39 2.177 14.953 -20.751 1.00 13.77 O
ATOM 20 C5 U A 39 3.166 17.082 -21.124 1.00 6.43 C
ATOM 21 C6 U A 39 2.925 18.401 -21.169 1.00 6.06 C
ATOM 22 P G A 40 2.961 21.712 -16.759 1.00 10.85 P
ATOM 23 OP1 G A 40 3.437 22.726 -15.772 1.00 5.01 O
ATOM 24 OP2 G A 40 3.938 20.624 -17.013 1.00 9.17 O
ATOM 25 O5' G A 40 1.502 21.175 -16.355 1.00 0.00 O
TER
ATOM 1 O3' C B 37 8.074 15.082 -25.729 1.00 20.21 O
ATOM 2 P G B 38 8.032 15.762 -24.279 1.00 31.38 P
ATOM 3 OP1 G B 38 9.407 16.259 -23.920 1.00 22.31 O
ATOM 4 OP2 G B 38 7.586 14.640 -23.397 1.00 15.16 O
ATOM 5 O5' G B 38 7.007 16.980 -24.383 1.00 14.61 O
ATOM 6 C5' G B 38 7.447 18.360 -24.324 1.00 7.17 C
ATOM 7 C4' G B 38 6.247 19.210 -24.682 1.00 14.03 C
ATOM 8 O4' G B 38 5.439 18.496 -25.609 1.00 6.36 O
ATOM 9 C3' G B 38 5.294 19.550 -23.546 1.00 17.79 C
ATOM 10 O3' G B 38 5.686 20.665 -22.754 1.00 15.43 O
ATOM 11 C2' G B 38 3.980 19.822 -24.279 1.00 12.40 C
ATOM 12 O2' G B 38 4.034 21.162 -24.742 1.00 14.01 O
ATOM 13 C1' G B 38 4.058 18.816 -25.415 1.00 10.46 C
ATOM 14 N9 G B 38 3.274 17.619 -25.071 1.00 8.85 N
ATOM 15 C8 G B 38 3.660 16.306 -25.146 1.00 11.22 C
ATOM 16 N7 G B 38 2.732 15.463 -24.787 1.00 13.22 N
ATOM 17 C5 G B 38 1.652 16.272 -24.443 1.00 11.44 C
ATOM 18 C6 G B 38 0.350 15.966 -23.980 1.00 13.75 C
ATOM 19 O6 G B 38 -0.127 14.844 -23.756 1.00 10.04 O
ATOM 20 N1 G B 38 -0.446 17.061 -23.756 1.00 10.87 N
ATOM 21 C2 G B 38 -0.012 18.326 -23.965 1.00 9.43 C
ATOM 22 N2 G B 38 -0.905 19.292 -23.696 1.00 14.77 N
ATOM 23 N3 G B 38 1.200 18.680 -24.398 1.00 11.68 N
ATOM 24 C4 G B 38 1.978 17.605 -24.623 1.00 10.35 C
ATOM 25 P U B 39 6.319 20.570 -21.274 1.00 27.62 P
ATOM 26 OP1 U B 39 7.568 21.406 -21.214 1.00 14.09 O
ATOM 27 OP2 U B 39 6.543 19.122 -21.065 1.00 6.95 O
ATOM 28 O5' U B 39 5.168 21.223 -20.377 1.00 15.75 O
TER
Atoms:
C4: (2.074,16.218,-20.825)
N3: (0.838,16.748,-20.601)
OP1: (7.568,21.406,-21.214)
OP2: (6.543,19.122,-21.065)
C2: (0.615,18.095,-20.646)
C1': (1.399,20.373,-20.990)
C3': (2.683,21.440,-19.315)
O5': (5.168,21.223,-20.377)
O4': (2.400,21.155,-21.618)
C5': (4.420,22.304,-20.990)
P: (6.319,20.570,-21.274)
C4': (2.961,22.073,-20.676)
C2': (1.309,20.822,-19.540)
O2': (0.350,21.855,-19.390)
N1: (1.688,18.924,-20.945)
O4: (2.177,14.953,-20.751)
O2: (-0.501,18.557,-20.437)
C6: (2.925,18.401,-21.169)
C5: (3.166,17.082,-21.124)
O3': (2.714,22.365,-18.224)
N3: (0.838,16.748,-20.601)
OP1: (7.568,21.406,-21.214)
OP2: (6.543,19.122,-21.065)
C2: (0.615,18.095,-20.646)
C1': (1.399,20.373,-20.990)
C3': (2.683,21.440,-19.315)
O5': (5.168,21.223,-20.377)
O4': (2.400,21.155,-21.618)
C5': (4.420,22.304,-20.990)
P: (6.319,20.570,-21.274)
C4': (2.961,22.073,-20.676)
C2': (1.309,20.822,-19.540)
O2': (0.350,21.855,-19.390)
N1: (1.688,18.924,-20.945)
O4: (2.177,14.953,-20.751)
O2: (-0.501,18.557,-20.437)
C6: (2.925,18.401,-21.169)
C5: (3.166,17.082,-21.124)
O3': (2.714,22.365,-18.224)
OP1: (9.407,16.259,-23.920)
OP2: (7.586,14.640,-23.397)
C3': (5.294,19.550,-23.546)
C1': (4.058,18.816,-25.415)
C5': (7.447,18.360,-24.324)
O6: (-0.127,14.844,-23.756)
O4': (5.439,18.496,-25.609)
C8: (3.660,16.306,-25.146)
C2: (-0.012,18.326,-23.965)
C6: (0.350,15.966,-23.980)
C5: (1.652,16.272,-24.443)
C4: (1.978,17.605,-24.623)
P: (8.032,15.762,-24.279)
C4': (6.247,19.210,-24.682)
C2': (3.980,19.822,-24.279)
O2': (4.034,21.162,-24.742)
N1: (-0.446,17.061,-23.756)
N2: (-0.905,19.292,-23.696)
N3: (1.200,18.680,-24.398)
N7: (2.732,15.463,-24.787)
N9: (3.274,17.619,-25.071)
O5': (7.007,16.980,-24.383)
O3': (5.686,20.665,-22.754)
OP2: (7.586,14.640,-23.397)
C3': (5.294,19.550,-23.546)
C1': (4.058,18.816,-25.415)
C5': (7.447,18.360,-24.324)
O6: (-0.127,14.844,-23.756)
O4': (5.439,18.496,-25.609)
C8: (3.660,16.306,-25.146)
C2: (-0.012,18.326,-23.965)
C6: (0.350,15.966,-23.980)
C5: (1.652,16.272,-24.443)
C4: (1.978,17.605,-24.623)
P: (8.032,15.762,-24.279)
C4': (6.247,19.210,-24.682)
C2': (3.980,19.822,-24.279)
O2': (4.034,21.162,-24.742)
N1: (-0.446,17.061,-23.756)
N2: (-0.905,19.292,-23.696)
N3: (1.200,18.680,-24.398)
N7: (2.732,15.463,-24.787)
N9: (3.274,17.619,-25.071)
O5': (7.007,16.980,-24.383)
O3': (5.686,20.665,-22.754)
Image (generated by PyMOL):