Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12623:12624
Extra
PDB:
ATOM 1 O3' C A2622 36.991 -1.123 67.314 1.00 55.34 O
ATOM 2 P G A2623 38.471 -1.542 67.928 1.00 87.03 P
ATOM 3 OP1 G A2623 39.441 -1.584 66.798 1.00 87.00 O
ATOM 4 OP2 G A2623 38.278 -2.782 68.777 1.00 87.00 O
ATOM 5 O5' G A2623 38.816 -0.320 68.879 1.00 87.11 O
ATOM 6 C5' G A2623 39.064 0.974 68.364 1.00 87.17 C
ATOM 7 C4' G A2623 40.196 1.667 69.104 1.00 87.21 C
ATOM 8 O4' G A2623 41.073 0.675 69.676 1.00 87.16 O
ATOM 9 C3' G A2623 41.084 2.589 68.255 1.00 87.25 C
ATOM 10 O3' G A2623 40.684 3.959 68.351 1.00 87.36 O
ATOM 11 C2' G A2623 42.522 2.341 68.749 1.00 87.24 C
ATOM 12 O2' G A2623 42.990 3.416 69.566 1.00 87.34 O
ATOM 13 C1' G A2623 42.408 1.072 69.600 1.00 87.17 C
ATOM 14 N9 G A2623 43.213 -0.056 69.079 1.00 87.09 N
ATOM 15 C8 G A2623 42.958 -1.027 68.111 1.00 87.02 C
ATOM 16 N7 G A2623 43.931 -1.886 67.961 1.00 86.98 N
ATOM 17 C5 G A2623 44.883 -1.437 68.901 1.00 87.03 C
ATOM 18 C6 G A2623 46.181 -1.927 69.247 1.00 87.03 C
ATOM 19 O6 G A2623 46.754 -2.914 68.742 1.00 86.99 O
ATOM 20 N1 G A2623 46.782 -1.166 70.278 1.00 87.11 N
ATOM 21 C2 G A2623 46.215 -0.058 70.887 1.00 87.18 C
ATOM 22 N2 G A2623 46.907 0.588 71.839 1.00 87.27 N
ATOM 23 N3 G A2623 45.031 0.399 70.580 1.00 87.18 N
ATOM 24 C4 G A2623 44.447 -0.326 69.595 1.00 87.10 C
ATOM 25 P A A2624 40.158 4.776 67.069 1.00107.36 P
ATOM 26 OP1 A A2624 40.753 4.150 65.860 1.00107.29 O
ATOM 27 OP2 A A2624 40.427 6.224 67.331 1.00107.49 O
ATOM 28 O5' A A2624 38.590 4.500 67.108 1.00107.37 O
TER
ATOM 1 O3' G B2623 40.684 3.959 68.351 1.00 87.36 O
ATOM 2 P A B2624 40.158 4.776 67.069 1.00107.36 P
ATOM 3 OP1 A B2624 40.753 4.150 65.860 1.00107.29 O
ATOM 4 OP2 A B2624 40.427 6.224 67.331 1.00107.49 O
ATOM 5 O5' A B2624 38.590 4.500 67.108 1.00107.37 O
ATOM 6 C5' A B2624 38.040 3.320 66.534 1.00107.28 C
ATOM 7 C4' A B2624 37.050 3.631 65.447 1.00107.33 C
ATOM 8 O4' A B2624 35.699 3.406 65.947 1.00107.35 O
ATOM 9 C3' A B2624 37.085 5.069 64.928 1.00107.45 C
ATOM 10 O3' A B2624 36.791 5.067 63.517 1.00107.47 O
ATOM 11 C2' A B2624 35.943 5.723 65.721 1.00107.54 C
ATOM 12 O2' A B2624 35.402 6.893 65.143 1.00107.68 O
ATOM 13 C1' A B2624 34.932 4.579 65.771 1.00107.48 C
ATOM 14 N9 A B2624 33.962 4.647 66.864 1.00107.53 N
ATOM 15 C8 A B2624 32.605 4.800 66.730 1.00107.61 C
ATOM 16 N7 A B2624 31.988 4.785 67.881 1.00107.65 N
ATOM 17 C5 A B2624 33.003 4.597 68.815 1.00107.59 C
ATOM 18 C6 A B2624 32.998 4.490 70.209 1.00107.62 C
ATOM 19 N6 A B2624 31.882 4.561 70.945 1.00107.70 N
ATOM 20 N1 A B2624 34.180 4.309 70.831 1.00107.57 N
ATOM 21 C2 A B2624 35.288 4.237 70.102 1.00107.50 C
ATOM 22 N3 A B2624 35.405 4.319 68.790 1.00107.47 N
ATOM 23 C4 A B2624 34.220 4.501 68.202 1.00107.52 C
ATOM 24 P U B2625 37.941 5.413 62.429 1.00143.29 P
ATOM 25 OP1 U B2625 37.993 4.277 61.471 1.00143.22 O
ATOM 26 OP2 U B2625 39.182 5.774 63.177 1.00143.28 O
ATOM 27 O5' U B2625 37.331 6.704 61.715 1.00143.45 O
TER
ATOM 2 P G A2623 38.471 -1.542 67.928 1.00 87.03 P
ATOM 3 OP1 G A2623 39.441 -1.584 66.798 1.00 87.00 O
ATOM 4 OP2 G A2623 38.278 -2.782 68.777 1.00 87.00 O
ATOM 5 O5' G A2623 38.816 -0.320 68.879 1.00 87.11 O
ATOM 6 C5' G A2623 39.064 0.974 68.364 1.00 87.17 C
ATOM 7 C4' G A2623 40.196 1.667 69.104 1.00 87.21 C
ATOM 8 O4' G A2623 41.073 0.675 69.676 1.00 87.16 O
ATOM 9 C3' G A2623 41.084 2.589 68.255 1.00 87.25 C
ATOM 10 O3' G A2623 40.684 3.959 68.351 1.00 87.36 O
ATOM 11 C2' G A2623 42.522 2.341 68.749 1.00 87.24 C
ATOM 12 O2' G A2623 42.990 3.416 69.566 1.00 87.34 O
ATOM 13 C1' G A2623 42.408 1.072 69.600 1.00 87.17 C
ATOM 14 N9 G A2623 43.213 -0.056 69.079 1.00 87.09 N
ATOM 15 C8 G A2623 42.958 -1.027 68.111 1.00 87.02 C
ATOM 16 N7 G A2623 43.931 -1.886 67.961 1.00 86.98 N
ATOM 17 C5 G A2623 44.883 -1.437 68.901 1.00 87.03 C
ATOM 18 C6 G A2623 46.181 -1.927 69.247 1.00 87.03 C
ATOM 19 O6 G A2623 46.754 -2.914 68.742 1.00 86.99 O
ATOM 20 N1 G A2623 46.782 -1.166 70.278 1.00 87.11 N
ATOM 21 C2 G A2623 46.215 -0.058 70.887 1.00 87.18 C
ATOM 22 N2 G A2623 46.907 0.588 71.839 1.00 87.27 N
ATOM 23 N3 G A2623 45.031 0.399 70.580 1.00 87.18 N
ATOM 24 C4 G A2623 44.447 -0.326 69.595 1.00 87.10 C
ATOM 25 P A A2624 40.158 4.776 67.069 1.00107.36 P
ATOM 26 OP1 A A2624 40.753 4.150 65.860 1.00107.29 O
ATOM 27 OP2 A A2624 40.427 6.224 67.331 1.00107.49 O
ATOM 28 O5' A A2624 38.590 4.500 67.108 1.00107.37 O
TER
ATOM 1 O3' G B2623 40.684 3.959 68.351 1.00 87.36 O
ATOM 2 P A B2624 40.158 4.776 67.069 1.00107.36 P
ATOM 3 OP1 A B2624 40.753 4.150 65.860 1.00107.29 O
ATOM 4 OP2 A B2624 40.427 6.224 67.331 1.00107.49 O
ATOM 5 O5' A B2624 38.590 4.500 67.108 1.00107.37 O
ATOM 6 C5' A B2624 38.040 3.320 66.534 1.00107.28 C
ATOM 7 C4' A B2624 37.050 3.631 65.447 1.00107.33 C
ATOM 8 O4' A B2624 35.699 3.406 65.947 1.00107.35 O
ATOM 9 C3' A B2624 37.085 5.069 64.928 1.00107.45 C
ATOM 10 O3' A B2624 36.791 5.067 63.517 1.00107.47 O
ATOM 11 C2' A B2624 35.943 5.723 65.721 1.00107.54 C
ATOM 12 O2' A B2624 35.402 6.893 65.143 1.00107.68 O
ATOM 13 C1' A B2624 34.932 4.579 65.771 1.00107.48 C
ATOM 14 N9 A B2624 33.962 4.647 66.864 1.00107.53 N
ATOM 15 C8 A B2624 32.605 4.800 66.730 1.00107.61 C
ATOM 16 N7 A B2624 31.988 4.785 67.881 1.00107.65 N
ATOM 17 C5 A B2624 33.003 4.597 68.815 1.00107.59 C
ATOM 18 C6 A B2624 32.998 4.490 70.209 1.00107.62 C
ATOM 19 N6 A B2624 31.882 4.561 70.945 1.00107.70 N
ATOM 20 N1 A B2624 34.180 4.309 70.831 1.00107.57 N
ATOM 21 C2 A B2624 35.288 4.237 70.102 1.00107.50 C
ATOM 22 N3 A B2624 35.405 4.319 68.790 1.00107.47 N
ATOM 23 C4 A B2624 34.220 4.501 68.202 1.00107.52 C
ATOM 24 P U B2625 37.941 5.413 62.429 1.00143.29 P
ATOM 25 OP1 U B2625 37.993 4.277 61.471 1.00143.22 O
ATOM 26 OP2 U B2625 39.182 5.774 63.177 1.00143.28 O
ATOM 27 O5' U B2625 37.331 6.704 61.715 1.00143.45 O
TER
Atoms:
OP1: (39.441,-1.584,66.798)
OP2: (38.278,-2.782,68.777)
C3': (41.084,2.589,68.255)
C1': (42.408,1.072,69.600)
C5': (39.064,0.974,68.364)
O6: (46.754,-2.914,68.742)
O4': (41.073,0.675,69.676)
C8: (42.958,-1.027,68.111)
C2: (46.215,-0.058,70.887)
C6: (46.181,-1.927,69.247)
C5: (44.883,-1.437,68.901)
C4: (44.447,-0.326,69.595)
P: (38.471,-1.542,67.928)
C4': (40.196,1.667,69.104)
C2': (42.522,2.341,68.749)
O2': (42.990,3.416,69.566)
N1: (46.782,-1.166,70.278)
N2: (46.907,0.588,71.839)
N3: (45.031,0.399,70.580)
N7: (43.931,-1.886,67.961)
N9: (43.213,-0.056,69.079)
O5': (38.816,-0.320,68.879)
O3': (40.684,3.959,68.351)
OP2: (38.278,-2.782,68.777)
C3': (41.084,2.589,68.255)
C1': (42.408,1.072,69.600)
C5': (39.064,0.974,68.364)
O6: (46.754,-2.914,68.742)
O4': (41.073,0.675,69.676)
C8: (42.958,-1.027,68.111)
C2: (46.215,-0.058,70.887)
C6: (46.181,-1.927,69.247)
C5: (44.883,-1.437,68.901)
C4: (44.447,-0.326,69.595)
P: (38.471,-1.542,67.928)
C4': (40.196,1.667,69.104)
C2': (42.522,2.341,68.749)
O2': (42.990,3.416,69.566)
N1: (46.782,-1.166,70.278)
N2: (46.907,0.588,71.839)
N3: (45.031,0.399,70.580)
N7: (43.931,-1.886,67.961)
N9: (43.213,-0.056,69.079)
O5': (38.816,-0.320,68.879)
O3': (40.684,3.959,68.351)
OP1: (40.753,4.150,65.860)
OP2: (40.427,6.224,67.331)
C3': (37.085,5.069,64.928)
C1': (34.932,4.579,65.771)
C5': (38.040,3.320,66.534)
O4': (35.699,3.406,65.947)
C8: (32.605,4.800,66.730)
O2': (35.402,6.893,65.143)
C6: (32.998,4.490,70.209)
C5: (33.003,4.597,68.815)
C4: (34.220,4.501,68.202)
P: (40.158,4.776,67.069)
C4': (37.050,3.631,65.447)
C2': (35.943,5.723,65.721)
C2: (35.288,4.237,70.102)
N1: (34.180,4.309,70.831)
N3: (35.405,4.319,68.790)
N6: (31.882,4.561,70.945)
N7: (31.988,4.785,67.881)
N9: (33.962,4.647,66.864)
O5': (38.590,4.500,67.108)
O3': (36.791,5.067,63.517)
OP2: (40.427,6.224,67.331)
C3': (37.085,5.069,64.928)
C1': (34.932,4.579,65.771)
C5': (38.040,3.320,66.534)
O4': (35.699,3.406,65.947)
C8: (32.605,4.800,66.730)
O2': (35.402,6.893,65.143)
C6: (32.998,4.490,70.209)
C5: (33.003,4.597,68.815)
C4: (34.220,4.501,68.202)
P: (40.158,4.776,67.069)
C4': (37.050,3.631,65.447)
C2': (35.943,5.723,65.721)
C2: (35.288,4.237,70.102)
N1: (34.180,4.309,70.831)
N3: (35.405,4.319,68.790)
N6: (31.882,4.561,70.945)
N7: (31.988,4.785,67.881)
N9: (33.962,4.647,66.864)
O5': (38.590,4.500,67.108)
O3': (36.791,5.067,63.517)
Image (generated by PyMOL):