Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0577:0576
Extra
PDB:
ATOM 1 O3' G A 576 -7.955 89.965 106.655 1.00 64.92 O
ATOM 2 P U A 577 -8.335 90.951 105.437 1.00 66.97 P
ATOM 3 OP1 U A 577 -8.947 90.171 104.322 1.00 63.10 O
ATOM 4 OP2 U A 577 -7.155 91.816 105.165 1.00 66.39 O
ATOM 5 O5' U A 577 -9.442 91.898 106.084 1.00 65.94 O
ATOM 6 C5' U A 577 -10.707 91.369 106.554 1.00 65.59 C
ATOM 7 C4' U A 577 -11.171 92.129 107.777 1.00 63.97 C
ATOM 8 O4' U A 577 -10.464 91.666 108.953 1.00 63.74 O
ATOM 9 C3' U A 577 -10.904 93.622 107.736 1.00 64.77 C
ATOM 10 O3' U A 577 -11.903 94.307 106.990 1.00 65.73 O
ATOM 11 C2' U A 577 -10.873 94.006 109.212 1.00 65.03 C
ATOM 12 O2' U A 577 -12.149 94.238 109.776 1.00 65.97 O
ATOM 13 C1' U A 577 -10.247 92.755 109.841 1.00 64.06 C
ATOM 14 N1 U A 577 -8.805 92.847 110.136 1.00 63.76 N
ATOM 15 C2 U A 577 -8.382 93.793 111.070 1.00 64.19 C
ATOM 16 O2 U A 577 -9.143 94.553 111.649 1.00 62.87 O
ATOM 17 N3 U A 577 -7.027 93.813 111.299 1.00 64.20 N
ATOM 18 C4 U A 577 -6.070 93.008 110.716 1.00 64.21 C
ATOM 19 O4 U A 577 -4.888 93.156 111.027 1.00 64.74 O
ATOM 20 C5 U A 577 -6.579 92.061 109.769 1.00 63.58 C
ATOM 21 C6 U A 577 -7.891 92.015 109.515 1.00 63.67 C
ATOM 22 P A A 578 -11.504 95.599 106.126 1.00 66.22 P
ATOM 23 OP1 A A 578 -12.700 96.035 105.366 1.00 67.50 O
ATOM 24 OP2 A A 578 -10.250 95.287 105.392 1.00 67.39 O
ATOM 25 O5' A A 578 -11.199 96.701 107.232 1.00 64.27 O
TER
ATOM 1 O3' A B 575 -8.972 87.315 110.493 1.00 65.95 O
ATOM 2 P G B 576 -9.344 85.916 109.805 1.00 68.99 P
ATOM 3 OP1 G B 576 -10.817 85.766 109.883 1.00 70.99 O
ATOM 4 OP2 G B 576 -8.466 84.870 110.394 1.00 68.05 O
ATOM 5 O5' G B 576 -8.984 86.128 108.264 1.00 68.73 O
ATOM 6 C5' G B 576 -7.643 86.451 107.853 1.00 66.57 C
ATOM 7 C4' G B 576 -7.466 87.953 107.775 1.00 64.67 C
ATOM 8 O4' G B 576 -6.178 88.301 108.330 1.00 64.12 O
ATOM 9 C3' G B 576 -7.518 88.624 106.407 1.00 63.21 C
ATOM 10 O3' G B 576 -7.955 89.965 106.655 1.00 64.92 O
ATOM 11 C2' G B 576 -6.048 88.584 105.996 1.00 61.91 C
ATOM 12 O2' G B 576 -5.686 89.543 105.023 1.00 61.14 O
ATOM 13 C1' G B 576 -5.374 88.894 107.333 1.00 60.46 C
ATOM 14 N9 G B 576 -4.022 88.388 107.531 1.00 56.23 N
ATOM 15 C8 G B 576 -3.461 87.248 107.008 1.00 53.96 C
ATOM 16 N7 G B 576 -2.249 87.036 107.438 1.00 53.04 N
ATOM 17 C5 G B 576 -1.991 88.111 108.280 1.00 51.63 C
ATOM 18 C6 G B 576 -0.842 88.423 109.039 1.00 51.24 C
ATOM 19 O6 G B 576 0.216 87.793 109.123 1.00 51.49 O
ATOM 20 N1 G B 576 -1.007 89.606 109.756 1.00 49.52 N
ATOM 21 C2 G B 576 -2.134 90.386 109.743 1.00 48.75 C
ATOM 22 N2 G B 576 -2.106 91.489 110.506 1.00 47.66 N
ATOM 23 N3 G B 576 -3.210 90.105 109.037 1.00 49.91 N
ATOM 24 C4 G B 576 -3.070 88.959 108.335 1.00 52.29 C
ATOM 25 P U B 577 -8.335 90.951 105.437 1.00 66.97 P
ATOM 26 OP1 U B 577 -8.947 90.171 104.322 1.00 63.10 O
ATOM 27 OP2 U B 577 -7.155 91.816 105.165 1.00 66.39 O
ATOM 28 O5' U B 577 -9.442 91.898 106.084 1.00 65.94 O
TER
ATOM 2 P U A 577 -8.335 90.951 105.437 1.00 66.97 P
ATOM 3 OP1 U A 577 -8.947 90.171 104.322 1.00 63.10 O
ATOM 4 OP2 U A 577 -7.155 91.816 105.165 1.00 66.39 O
ATOM 5 O5' U A 577 -9.442 91.898 106.084 1.00 65.94 O
ATOM 6 C5' U A 577 -10.707 91.369 106.554 1.00 65.59 C
ATOM 7 C4' U A 577 -11.171 92.129 107.777 1.00 63.97 C
ATOM 8 O4' U A 577 -10.464 91.666 108.953 1.00 63.74 O
ATOM 9 C3' U A 577 -10.904 93.622 107.736 1.00 64.77 C
ATOM 10 O3' U A 577 -11.903 94.307 106.990 1.00 65.73 O
ATOM 11 C2' U A 577 -10.873 94.006 109.212 1.00 65.03 C
ATOM 12 O2' U A 577 -12.149 94.238 109.776 1.00 65.97 O
ATOM 13 C1' U A 577 -10.247 92.755 109.841 1.00 64.06 C
ATOM 14 N1 U A 577 -8.805 92.847 110.136 1.00 63.76 N
ATOM 15 C2 U A 577 -8.382 93.793 111.070 1.00 64.19 C
ATOM 16 O2 U A 577 -9.143 94.553 111.649 1.00 62.87 O
ATOM 17 N3 U A 577 -7.027 93.813 111.299 1.00 64.20 N
ATOM 18 C4 U A 577 -6.070 93.008 110.716 1.00 64.21 C
ATOM 19 O4 U A 577 -4.888 93.156 111.027 1.00 64.74 O
ATOM 20 C5 U A 577 -6.579 92.061 109.769 1.00 63.58 C
ATOM 21 C6 U A 577 -7.891 92.015 109.515 1.00 63.67 C
ATOM 22 P A A 578 -11.504 95.599 106.126 1.00 66.22 P
ATOM 23 OP1 A A 578 -12.700 96.035 105.366 1.00 67.50 O
ATOM 24 OP2 A A 578 -10.250 95.287 105.392 1.00 67.39 O
ATOM 25 O5' A A 578 -11.199 96.701 107.232 1.00 64.27 O
TER
ATOM 1 O3' A B 575 -8.972 87.315 110.493 1.00 65.95 O
ATOM 2 P G B 576 -9.344 85.916 109.805 1.00 68.99 P
ATOM 3 OP1 G B 576 -10.817 85.766 109.883 1.00 70.99 O
ATOM 4 OP2 G B 576 -8.466 84.870 110.394 1.00 68.05 O
ATOM 5 O5' G B 576 -8.984 86.128 108.264 1.00 68.73 O
ATOM 6 C5' G B 576 -7.643 86.451 107.853 1.00 66.57 C
ATOM 7 C4' G B 576 -7.466 87.953 107.775 1.00 64.67 C
ATOM 8 O4' G B 576 -6.178 88.301 108.330 1.00 64.12 O
ATOM 9 C3' G B 576 -7.518 88.624 106.407 1.00 63.21 C
ATOM 10 O3' G B 576 -7.955 89.965 106.655 1.00 64.92 O
ATOM 11 C2' G B 576 -6.048 88.584 105.996 1.00 61.91 C
ATOM 12 O2' G B 576 -5.686 89.543 105.023 1.00 61.14 O
ATOM 13 C1' G B 576 -5.374 88.894 107.333 1.00 60.46 C
ATOM 14 N9 G B 576 -4.022 88.388 107.531 1.00 56.23 N
ATOM 15 C8 G B 576 -3.461 87.248 107.008 1.00 53.96 C
ATOM 16 N7 G B 576 -2.249 87.036 107.438 1.00 53.04 N
ATOM 17 C5 G B 576 -1.991 88.111 108.280 1.00 51.63 C
ATOM 18 C6 G B 576 -0.842 88.423 109.039 1.00 51.24 C
ATOM 19 O6 G B 576 0.216 87.793 109.123 1.00 51.49 O
ATOM 20 N1 G B 576 -1.007 89.606 109.756 1.00 49.52 N
ATOM 21 C2 G B 576 -2.134 90.386 109.743 1.00 48.75 C
ATOM 22 N2 G B 576 -2.106 91.489 110.506 1.00 47.66 N
ATOM 23 N3 G B 576 -3.210 90.105 109.037 1.00 49.91 N
ATOM 24 C4 G B 576 -3.070 88.959 108.335 1.00 52.29 C
ATOM 25 P U B 577 -8.335 90.951 105.437 1.00 66.97 P
ATOM 26 OP1 U B 577 -8.947 90.171 104.322 1.00 63.10 O
ATOM 27 OP2 U B 577 -7.155 91.816 105.165 1.00 66.39 O
ATOM 28 O5' U B 577 -9.442 91.898 106.084 1.00 65.94 O
TER
Atoms:
C4: (-6.070,93.008,110.716)
N3: (-7.027,93.813,111.299)
OP1: (-8.947,90.171,104.322)
OP2: (-7.155,91.816,105.165)
C2: (-8.382,93.793,111.070)
C1': (-10.247,92.755,109.841)
C3': (-10.904,93.622,107.736)
O5': (-9.442,91.898,106.084)
O4': (-10.464,91.666,108.953)
C5': (-10.707,91.369,106.554)
P: (-8.335,90.951,105.437)
C4': (-11.171,92.129,107.777)
C2': (-10.873,94.006,109.212)
O2': (-12.149,94.238,109.776)
N1: (-8.805,92.847,110.136)
O4: (-4.888,93.156,111.027)
O2: (-9.143,94.553,111.649)
C6: (-7.891,92.015,109.515)
C5: (-6.579,92.061,109.769)
O3': (-11.903,94.307,106.990)
N3: (-7.027,93.813,111.299)
OP1: (-8.947,90.171,104.322)
OP2: (-7.155,91.816,105.165)
C2: (-8.382,93.793,111.070)
C1': (-10.247,92.755,109.841)
C3': (-10.904,93.622,107.736)
O5': (-9.442,91.898,106.084)
O4': (-10.464,91.666,108.953)
C5': (-10.707,91.369,106.554)
P: (-8.335,90.951,105.437)
C4': (-11.171,92.129,107.777)
C2': (-10.873,94.006,109.212)
O2': (-12.149,94.238,109.776)
N1: (-8.805,92.847,110.136)
O4: (-4.888,93.156,111.027)
O2: (-9.143,94.553,111.649)
C6: (-7.891,92.015,109.515)
C5: (-6.579,92.061,109.769)
O3': (-11.903,94.307,106.990)
OP1: (-10.817,85.766,109.883)
OP2: (-8.466,84.870,110.394)
C3': (-7.518,88.624,106.407)
C1': (-5.374,88.894,107.333)
C5': (-7.643,86.451,107.853)
O6: (0.216,87.793,109.123)
O4': (-6.178,88.301,108.330)
C8: (-3.461,87.248,107.008)
C2: (-2.134,90.386,109.743)
C6: (-0.842,88.423,109.039)
C5: (-1.991,88.111,108.280)
C4: (-3.070,88.959,108.335)
P: (-9.344,85.916,109.805)
C4': (-7.466,87.953,107.775)
C2': (-6.048,88.584,105.996)
O2': (-5.686,89.543,105.023)
N1: (-1.007,89.606,109.756)
N2: (-2.106,91.489,110.506)
N3: (-3.210,90.105,109.037)
N7: (-2.249,87.036,107.438)
N9: (-4.022,88.388,107.531)
O5': (-8.984,86.128,108.264)
O3': (-7.955,89.965,106.655)
OP2: (-8.466,84.870,110.394)
C3': (-7.518,88.624,106.407)
C1': (-5.374,88.894,107.333)
C5': (-7.643,86.451,107.853)
O6: (0.216,87.793,109.123)
O4': (-6.178,88.301,108.330)
C8: (-3.461,87.248,107.008)
C2: (-2.134,90.386,109.743)
C6: (-0.842,88.423,109.039)
C5: (-1.991,88.111,108.280)
C4: (-3.070,88.959,108.335)
P: (-9.344,85.916,109.805)
C4': (-7.466,87.953,107.775)
C2': (-6.048,88.584,105.996)
O2': (-5.686,89.543,105.023)
N1: (-1.007,89.606,109.756)
N2: (-2.106,91.489,110.506)
N3: (-3.210,90.105,109.037)
N7: (-2.249,87.036,107.438)
N9: (-4.022,88.388,107.531)
O5': (-8.984,86.128,108.264)
O3': (-7.955,89.965,106.655)
Image (generated by PyMOL):