ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1084:A1083

Extra

PDB:
ATOM 1 O3' A A1083 38.546 95.008 119.592 1.00 41.41 O
ATOM 2 P U A1084 39.921 95.787 119.450 1.00 39.24 P
ATOM 3 OP1 U A1084 40.928 95.130 120.315 1.00 40.12 O
ATOM 4 OP2 U A1084 39.587 97.203 119.652 1.00 38.55 O
ATOM 5 O5' U A1084 40.307 95.542 117.929 1.00 37.72 O
ATOM 6 C5' U A1084 40.422 94.201 117.408 1.00 38.63 C
ATOM 7 C4' U A1084 40.375 94.217 115.899 1.00 40.22 C
ATOM 8 O4' U A1084 39.129 94.782 115.443 1.00 39.13 O
ATOM 9 C3' U A1084 41.437 95.092 115.274 1.00 40.03 C
ATOM 10 O3' U A1084 42.652 94.349 115.237 1.00 40.14 O
ATOM 11 C2' U A1084 40.844 95.450 113.910 1.00 39.50 C
ATOM 12 O2' U A1084 41.043 94.470 112.909 1.00 39.52 O
ATOM 13 C1' U A1084 39.344 95.493 114.232 1.00 39.76 C
ATOM 14 N1 U A1084 38.728 96.821 114.376 1.00 40.07 N
ATOM 15 C2 U A1084 38.365 97.544 113.238 1.00 40.79 C
ATOM 16 O2 U A1084 38.567 97.165 112.093 1.00 43.66 O
ATOM 17 N3 U A1084 37.761 98.744 113.500 1.00 39.92 N
ATOM 18 C4 U A1084 37.504 99.294 114.742 1.00 40.68 C
ATOM 19 O4 U A1084 36.975 100.407 114.828 1.00 41.11 O
ATOM 20 C5 U A1084 37.918 98.499 115.832 1.00 40.48 C
ATOM 21 C6 U A1084 38.499 97.325 115.620 1.00 40.08 C
ATOM 22 P C A1085 44.004 95.019 115.773 1.00 42.73 P
ATOM 23 OP1 C A1085 45.128 94.189 115.297 1.00 42.60 O
ATOM 24 OP2 C A1085 43.884 95.316 117.222 1.00 39.24 O
ATOM 25 O5' C A1085 44.070 96.361 114.926 1.00 40.89 O
TER

ATOM 1 O3' A B1082 36.364 100.462 121.092 1.00 44.15 O
ATOM 2 P A B1083 35.274 99.795 120.122 1.00 45.42 P
ATOM 3 OP1 A B1083 35.758 100.128 118.767 1.00 46.38 O
ATOM 4 OP2 A B1083 33.887 100.180 120.522 1.00 46.31 O
ATOM 5 O5' A B1083 35.438 98.236 120.398 1.00 43.48 O
ATOM 6 C5' A B1083 36.669 97.563 120.102 1.00 41.44 C
ATOM 7 C4' A B1083 36.415 96.102 119.847 1.00 41.75 C
ATOM 8 O4' A B1083 35.123 95.903 119.233 1.00 42.63 O
ATOM 9 C3' A B1083 37.419 95.487 118.900 1.00 42.10 C
ATOM 10 O3' A B1083 38.546 95.008 119.592 1.00 41.41 O
ATOM 11 C2' A B1083 36.625 94.420 118.169 1.00 43.34 C
ATOM 12 O2' A B1083 36.548 93.203 118.880 1.00 42.51 O
ATOM 13 C1' A B1083 35.258 95.096 118.074 1.00 43.51 C
ATOM 14 N9 A B1083 35.094 95.963 116.902 1.00 44.41 N
ATOM 15 C8 A B1083 34.749 97.294 116.917 1.00 44.69 C
ATOM 16 N7 A B1083 34.630 97.827 115.731 1.00 44.08 N
ATOM 17 C5 A B1083 34.925 96.786 114.870 1.00 43.82 C
ATOM 18 C6 A B1083 34.962 96.715 113.478 1.00 43.65 C
ATOM 19 N6 A B1083 34.640 97.737 112.691 1.00 42.19 N
ATOM 20 N1 A B1083 35.323 95.542 112.917 1.00 44.93 N
ATOM 21 C2 A B1083 35.591 94.508 113.725 1.00 46.52 C
ATOM 22 N3 A B1083 35.563 94.446 115.056 1.00 46.16 N
ATOM 23 C4 A B1083 35.223 95.634 115.575 1.00 44.12 C
ATOM 24 P U B1084 39.921 95.787 119.450 1.00 39.24 P
ATOM 25 OP1 U B1084 40.928 95.130 120.315 1.00 40.12 O
ATOM 26 OP2 U B1084 39.587 97.203 119.652 1.00 38.55 O
ATOM 27 O5' U B1084 40.307 95.542 117.929 1.00 37.72 O
TER

Atoms:
C4: (37.504,99.294,114.742)
N3: (37.761,98.744,113.500)
OP1: (40.928,95.130,120.315)
OP2: (39.587,97.203,119.652)
C2: (38.365,97.544,113.238)
C1': (39.344,95.493,114.232)
C3': (41.437,95.092,115.274)
O5': (40.307,95.542,117.929)
O4': (39.129,94.782,115.443)
C5': (40.422,94.201,117.408)
P: (39.921,95.787,119.450)
C4': (40.375,94.217,115.899)
C2': (40.844,95.450,113.910)
O2': (41.043,94.470,112.909)
N1: (38.728,96.821,114.376)
O4: (36.975,100.407,114.828)
O2: (38.567,97.165,112.093)
C6: (38.499,97.325,115.620)
C5: (37.918,98.499,115.832)
O3': (42.652,94.349,115.237)
OP1: (35.758,100.128,118.767)
OP2: (33.887,100.180,120.522)
C3': (37.419,95.487,118.900)
C1': (35.258,95.096,118.074)
C5': (36.669,97.563,120.102)
O4': (35.123,95.903,119.233)
C8: (34.749,97.294,116.917)
O2': (36.548,93.203,118.880)
C6: (34.962,96.715,113.478)
C5: (34.925,96.786,114.870)
C4: (35.223,95.634,115.575)
P: (35.274,99.795,120.122)
C4': (36.415,96.102,119.847)
C2': (36.625,94.420,118.169)
C2: (35.591,94.508,113.725)
N1: (35.323,95.542,112.917)
N3: (35.563,94.446,115.056)
N6: (34.640,97.737,112.691)
N7: (34.630,97.827,115.731)
N9: (35.094,95.963,116.902)
O5': (35.438,98.236,120.398)
O3': (38.546,95.008,119.592)
Image (generated by PyMOL):
PyMOL image
show in jmol