Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MDI:C2:C1
Extra
PDB:
ATOM 1 O3' G A 1 24.513 23.895 -5.586 1.00 27.03 O
ATOM 2 P U A 2 24.465 25.267 -6.402 1.00 29.62 P
ATOM 3 OP1 U A 2 23.656 26.242 -5.623 1.00 24.56 O
ATOM 4 OP2 U A 2 24.141 24.864 -7.791 1.00 25.83 O
ATOM 5 O5' U A 2 25.985 25.717 -6.309 1.00 29.07 O
ATOM 6 C5' U A 2 26.492 26.157 -5.053 1.00 25.80 C
ATOM 7 C4' U A 2 27.993 26.073 -5.029 1.00 25.31 C
ATOM 8 O4' U A 2 28.385 24.679 -4.874 1.00 24.55 O
ATOM 9 C3' U A 2 28.674 26.581 -6.307 1.00 23.24 C
ATOM 10 O3' U A 2 29.833 27.344 -5.974 1.00 23.96 O
ATOM 11 C2' U A 2 29.047 25.288 -7.039 1.00 24.89 C
ATOM 12 O2' U A 2 30.140 25.379 -7.936 1.00 24.74 O
ATOM 13 C1' U A 2 29.328 24.342 -5.874 1.00 20.69 C
ATOM 14 N1 U A 2 29.199 22.909 -6.197 1.00 23.74 N
ATOM 15 C2 U A 2 30.325 22.131 -6.022 1.00 24.44 C
ATOM 16 O2 U A 2 31.367 22.598 -5.615 1.00 21.68 O
ATOM 17 N3 U A 2 30.188 20.799 -6.334 1.00 19.42 N
ATOM 18 C4 U A 2 29.050 20.178 -6.791 1.00 20.89 C
ATOM 19 O4 U A 2 29.076 18.965 -7.027 1.00 21.15 O
ATOM 20 C5 U A 2 27.922 21.050 -6.956 1.00 21.29 C
ATOM 21 C6 U A 2 28.029 22.349 -6.661 1.00 23.55 C
ATOM 22 P A A 3 29.890 28.920 -6.329 1.00 25.68 P
ATOM 23 OP1 A A 3 29.297 29.086 -7.676 1.00 24.21 O
ATOM 24 OP2 A A 3 31.281 29.396 -6.101 1.00 29.18 O
ATOM 25 O5' A A 3 28.956 29.547 -5.216 1.00 26.24 O
TER
ATOM 1 P G B 1 20.040 20.728 -5.254 1.00 21.27 P
ATOM 2 OP1 G B 1 19.470 22.036 -5.667 1.00 30.16 O
ATOM 3 OP2 G B 1 20.112 19.634 -6.236 1.00 24.91 O
ATOM 4 O5' G B 1 21.453 20.929 -4.588 1.00 24.15 O
ATOM 5 C5' G B 1 21.764 22.115 -3.867 1.00 25.15 C
ATOM 6 C4' G B 1 23.183 22.530 -4.149 1.00 22.22 C
ATOM 7 O4' G B 1 24.049 21.381 -3.937 1.00 23.11 O
ATOM 8 C3' G B 1 23.422 22.979 -5.591 1.00 24.52 C
ATOM 9 O3' G B 1 24.513 23.895 -5.586 1.00 27.03 O
ATOM 10 C2' G B 1 23.847 21.677 -6.261 1.00 22.52 C
ATOM 11 O2' G B 1 24.579 21.810 -7.459 1.00 20.63 O
ATOM 12 C1' G B 1 24.696 21.059 -5.155 1.00 22.44 C
ATOM 13 N9 G B 1 24.833 19.609 -5.294 1.00 22.02 N
ATOM 14 C8 G B 1 23.942 18.746 -5.896 1.00 20.82 C
ATOM 15 N7 G B 1 24.358 17.506 -5.900 1.00 20.41 N
ATOM 16 C5 G B 1 25.601 17.569 -5.286 1.00 17.35 C
ATOM 17 C6 G B 1 26.527 16.543 -5.004 1.00 20.02 C
ATOM 18 O6 G B 1 26.409 15.337 -5.262 1.00 19.49 O
ATOM 19 N1 G B 1 27.666 17.039 -4.356 1.00 17.77 N
ATOM 20 C2 G B 1 27.887 18.359 -4.036 1.00 17.48 C
ATOM 21 N2 G B 1 29.036 18.657 -3.422 1.00 19.64 N
ATOM 22 N3 G B 1 27.028 19.325 -4.288 1.00 19.66 N
ATOM 23 C4 G B 1 25.914 18.858 -4.908 1.00 21.06 C
ATOM 24 P U B 2 24.465 25.267 -6.402 1.00 29.62 P
ATOM 25 OP1 U B 2 23.656 26.242 -5.623 1.00 24.56 O
ATOM 26 OP2 U B 2 24.141 24.864 -7.791 1.00 25.83 O
ATOM 27 O5' U B 2 25.985 25.717 -6.309 1.00 29.07 O
TER
ATOM 2 P U A 2 24.465 25.267 -6.402 1.00 29.62 P
ATOM 3 OP1 U A 2 23.656 26.242 -5.623 1.00 24.56 O
ATOM 4 OP2 U A 2 24.141 24.864 -7.791 1.00 25.83 O
ATOM 5 O5' U A 2 25.985 25.717 -6.309 1.00 29.07 O
ATOM 6 C5' U A 2 26.492 26.157 -5.053 1.00 25.80 C
ATOM 7 C4' U A 2 27.993 26.073 -5.029 1.00 25.31 C
ATOM 8 O4' U A 2 28.385 24.679 -4.874 1.00 24.55 O
ATOM 9 C3' U A 2 28.674 26.581 -6.307 1.00 23.24 C
ATOM 10 O3' U A 2 29.833 27.344 -5.974 1.00 23.96 O
ATOM 11 C2' U A 2 29.047 25.288 -7.039 1.00 24.89 C
ATOM 12 O2' U A 2 30.140 25.379 -7.936 1.00 24.74 O
ATOM 13 C1' U A 2 29.328 24.342 -5.874 1.00 20.69 C
ATOM 14 N1 U A 2 29.199 22.909 -6.197 1.00 23.74 N
ATOM 15 C2 U A 2 30.325 22.131 -6.022 1.00 24.44 C
ATOM 16 O2 U A 2 31.367 22.598 -5.615 1.00 21.68 O
ATOM 17 N3 U A 2 30.188 20.799 -6.334 1.00 19.42 N
ATOM 18 C4 U A 2 29.050 20.178 -6.791 1.00 20.89 C
ATOM 19 O4 U A 2 29.076 18.965 -7.027 1.00 21.15 O
ATOM 20 C5 U A 2 27.922 21.050 -6.956 1.00 21.29 C
ATOM 21 C6 U A 2 28.029 22.349 -6.661 1.00 23.55 C
ATOM 22 P A A 3 29.890 28.920 -6.329 1.00 25.68 P
ATOM 23 OP1 A A 3 29.297 29.086 -7.676 1.00 24.21 O
ATOM 24 OP2 A A 3 31.281 29.396 -6.101 1.00 29.18 O
ATOM 25 O5' A A 3 28.956 29.547 -5.216 1.00 26.24 O
TER
ATOM 1 P G B 1 20.040 20.728 -5.254 1.00 21.27 P
ATOM 2 OP1 G B 1 19.470 22.036 -5.667 1.00 30.16 O
ATOM 3 OP2 G B 1 20.112 19.634 -6.236 1.00 24.91 O
ATOM 4 O5' G B 1 21.453 20.929 -4.588 1.00 24.15 O
ATOM 5 C5' G B 1 21.764 22.115 -3.867 1.00 25.15 C
ATOM 6 C4' G B 1 23.183 22.530 -4.149 1.00 22.22 C
ATOM 7 O4' G B 1 24.049 21.381 -3.937 1.00 23.11 O
ATOM 8 C3' G B 1 23.422 22.979 -5.591 1.00 24.52 C
ATOM 9 O3' G B 1 24.513 23.895 -5.586 1.00 27.03 O
ATOM 10 C2' G B 1 23.847 21.677 -6.261 1.00 22.52 C
ATOM 11 O2' G B 1 24.579 21.810 -7.459 1.00 20.63 O
ATOM 12 C1' G B 1 24.696 21.059 -5.155 1.00 22.44 C
ATOM 13 N9 G B 1 24.833 19.609 -5.294 1.00 22.02 N
ATOM 14 C8 G B 1 23.942 18.746 -5.896 1.00 20.82 C
ATOM 15 N7 G B 1 24.358 17.506 -5.900 1.00 20.41 N
ATOM 16 C5 G B 1 25.601 17.569 -5.286 1.00 17.35 C
ATOM 17 C6 G B 1 26.527 16.543 -5.004 1.00 20.02 C
ATOM 18 O6 G B 1 26.409 15.337 -5.262 1.00 19.49 O
ATOM 19 N1 G B 1 27.666 17.039 -4.356 1.00 17.77 N
ATOM 20 C2 G B 1 27.887 18.359 -4.036 1.00 17.48 C
ATOM 21 N2 G B 1 29.036 18.657 -3.422 1.00 19.64 N
ATOM 22 N3 G B 1 27.028 19.325 -4.288 1.00 19.66 N
ATOM 23 C4 G B 1 25.914 18.858 -4.908 1.00 21.06 C
ATOM 24 P U B 2 24.465 25.267 -6.402 1.00 29.62 P
ATOM 25 OP1 U B 2 23.656 26.242 -5.623 1.00 24.56 O
ATOM 26 OP2 U B 2 24.141 24.864 -7.791 1.00 25.83 O
ATOM 27 O5' U B 2 25.985 25.717 -6.309 1.00 29.07 O
TER
Atoms:
C4: (29.050,20.178,-6.791)
N3: (30.188,20.799,-6.334)
OP1: (23.656,26.242,-5.623)
OP2: (24.141,24.864,-7.791)
C2: (30.325,22.131,-6.022)
C1': (29.328,24.342,-5.874)
C3': (28.674,26.581,-6.307)
O5': (25.985,25.717,-6.309)
O4': (28.385,24.679,-4.874)
C5': (26.492,26.157,-5.053)
P: (24.465,25.267,-6.402)
C4': (27.993,26.073,-5.029)
C2': (29.047,25.288,-7.039)
O2': (30.140,25.379,-7.936)
N1: (29.199,22.909,-6.197)
O4: (29.076,18.965,-7.027)
O2: (31.367,22.598,-5.615)
C6: (28.029,22.349,-6.661)
C5: (27.922,21.050,-6.956)
O3': (29.833,27.344,-5.974)
N3: (30.188,20.799,-6.334)
OP1: (23.656,26.242,-5.623)
OP2: (24.141,24.864,-7.791)
C2: (30.325,22.131,-6.022)
C1': (29.328,24.342,-5.874)
C3': (28.674,26.581,-6.307)
O5': (25.985,25.717,-6.309)
O4': (28.385,24.679,-4.874)
C5': (26.492,26.157,-5.053)
P: (24.465,25.267,-6.402)
C4': (27.993,26.073,-5.029)
C2': (29.047,25.288,-7.039)
O2': (30.140,25.379,-7.936)
N1: (29.199,22.909,-6.197)
O4: (29.076,18.965,-7.027)
O2: (31.367,22.598,-5.615)
C6: (28.029,22.349,-6.661)
C5: (27.922,21.050,-6.956)
O3': (29.833,27.344,-5.974)
OP1: (19.470,22.036,-5.667)
OP2: (20.112,19.634,-6.236)
C3': (23.422,22.979,-5.591)
C1': (24.696,21.059,-5.155)
C5': (21.764,22.115,-3.867)
O6: (26.409,15.337,-5.262)
O4': (24.049,21.381,-3.937)
C8: (23.942,18.746,-5.896)
C2: (27.887,18.359,-4.036)
C6: (26.527,16.543,-5.004)
C5: (25.601,17.569,-5.286)
C4: (25.914,18.858,-4.908)
P: (20.040,20.728,-5.254)
C4': (23.183,22.530,-4.149)
C2': (23.847,21.677,-6.261)
O2': (24.579,21.810,-7.459)
N1: (27.666,17.039,-4.356)
N2: (29.036,18.657,-3.422)
N3: (27.028,19.325,-4.288)
N7: (24.358,17.506,-5.900)
N9: (24.833,19.609,-5.294)
O5': (21.453,20.929,-4.588)
O3': (24.513,23.895,-5.586)
OP2: (20.112,19.634,-6.236)
C3': (23.422,22.979,-5.591)
C1': (24.696,21.059,-5.155)
C5': (21.764,22.115,-3.867)
O6: (26.409,15.337,-5.262)
O4': (24.049,21.381,-3.937)
C8: (23.942,18.746,-5.896)
C2: (27.887,18.359,-4.036)
C6: (26.527,16.543,-5.004)
C5: (25.601,17.569,-5.286)
C4: (25.914,18.858,-4.908)
P: (20.040,20.728,-5.254)
C4': (23.183,22.530,-4.149)
C2': (23.847,21.677,-6.261)
O2': (24.579,21.810,-7.459)
N1: (27.666,17.039,-4.356)
N2: (29.036,18.657,-3.422)
N3: (27.028,19.325,-4.288)
N7: (24.358,17.506,-5.900)
N9: (24.833,19.609,-5.294)
O5': (21.453,20.929,-4.588)
O3': (24.513,23.895,-5.586)
Image (generated by PyMOL):