Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0274:0273
Extra
PDB:
ATOM 1 O3' A A 273 64.424 106.334 0.760 1.00108.89 O
ATOM 2 P U A 274 64.189 107.816 1.340 1.00105.87 P
ATOM 3 OP1 U A 274 63.490 107.686 2.644 1.00105.63 O
ATOM 4 OP2 U A 274 63.583 108.639 0.261 1.00104.81 O
ATOM 5 O5' U A 274 65.659 108.364 1.617 1.00103.77 O
ATOM 6 C5' U A 274 66.568 107.636 2.462 1.00101.17 C
ATOM 7 C4' U A 274 67.993 108.030 2.156 1.00 99.65 C
ATOM 8 O4' U A 274 68.271 107.759 0.758 1.00 99.47 O
ATOM 9 C3' U A 274 68.310 109.506 2.325 1.00 98.65 C
ATOM 10 O3' U A 274 68.612 109.814 3.682 1.00 98.14 O
ATOM 11 C2' U A 274 69.501 109.688 1.391 1.00 98.62 C
ATOM 12 O2' U A 274 70.722 109.221 1.931 1.00 97.51 O
ATOM 13 C1' U A 274 69.101 108.781 0.225 1.00 98.54 C
ATOM 14 N1 U A 274 68.358 109.476 -0.843 1.00 97.96 N
ATOM 15 C2 U A 274 69.072 110.296 -1.706 1.00 96.97 C
ATOM 16 O2 U A 274 70.279 110.468 -1.616 1.00 96.16 O
ATOM 17 N3 U A 274 68.317 110.910 -2.678 1.00 96.66 N
ATOM 18 C4 U A 274 66.954 110.796 -2.873 1.00 96.57 C
ATOM 19 O4 U A 274 66.414 111.432 -3.783 1.00 96.18 O
ATOM 20 C5 U A 274 66.290 109.937 -1.945 1.00 96.89 C
ATOM 21 C6 U A 274 66.992 109.322 -0.988 1.00 97.54 C
ATOM 22 P C A 275 68.150 111.219 4.304 1.00 97.16 P
ATOM 23 OP1 C A 275 68.527 111.210 5.742 1.00 96.45 O
ATOM 24 OP2 C A 275 66.735 111.438 3.919 1.00 96.87 O
ATOM 25 O5' C A 275 69.061 112.292 3.555 1.00 98.31 O
TER
ATOM 1 O3' C B 272 61.589 107.182 -4.538 1.00134.16 O
ATOM 2 P A B 273 62.471 107.841 -3.361 1.00131.00 P
ATOM 3 OP1 A B 273 61.566 108.088 -2.205 1.00131.47 O
ATOM 4 OP2 A B 273 63.220 108.978 -3.966 1.00130.24 O
ATOM 5 O5' A B 273 63.531 106.719 -2.958 1.00126.69 O
ATOM 6 C5' A B 273 63.168 105.597 -2.130 1.00119.98 C
ATOM 7 C4' A B 273 64.377 105.111 -1.361 1.00115.55 C
ATOM 8 O4' A B 273 65.407 104.704 -2.305 1.00114.16 O
ATOM 9 C3' A B 273 65.065 106.162 -0.501 1.00112.45 C
ATOM 10 O3' A B 273 64.424 106.334 0.760 1.00108.89 O
ATOM 11 C2' A B 273 66.482 105.613 -0.393 1.00111.64 C
ATOM 12 O2' A B 273 66.603 104.552 0.535 1.00110.10 O
ATOM 13 C1' A B 273 66.691 105.068 -1.808 1.00111.48 C
ATOM 14 N9 A B 273 67.278 106.050 -2.727 1.00109.54 N
ATOM 15 C8 A B 273 66.630 106.791 -3.691 1.00108.81 C
ATOM 16 N7 A B 273 67.420 107.588 -4.366 1.00107.84 N
ATOM 17 C5 A B 273 68.673 107.362 -3.814 1.00107.16 C
ATOM 18 C6 A B 273 69.940 107.903 -4.094 1.00106.38 C
ATOM 19 N6 A B 273 70.164 108.813 -5.045 1.00105.52 N
ATOM 20 N1 A B 273 70.983 107.470 -3.355 1.00106.02 N
ATOM 21 C2 A B 273 70.759 106.555 -2.405 1.00106.17 C
ATOM 22 N3 A B 273 69.619 105.969 -2.051 1.00107.03 N
ATOM 23 C4 A B 273 68.601 106.420 -2.802 1.00107.74 C
ATOM 24 P U B 274 64.189 107.816 1.340 1.00105.87 P
ATOM 25 OP1 U B 274 63.490 107.686 2.644 1.00105.63 O
ATOM 26 OP2 U B 274 63.583 108.639 0.261 1.00104.81 O
ATOM 27 O5' U B 274 65.659 108.364 1.617 1.00103.77 O
TER
ATOM 2 P U A 274 64.189 107.816 1.340 1.00105.87 P
ATOM 3 OP1 U A 274 63.490 107.686 2.644 1.00105.63 O
ATOM 4 OP2 U A 274 63.583 108.639 0.261 1.00104.81 O
ATOM 5 O5' U A 274 65.659 108.364 1.617 1.00103.77 O
ATOM 6 C5' U A 274 66.568 107.636 2.462 1.00101.17 C
ATOM 7 C4' U A 274 67.993 108.030 2.156 1.00 99.65 C
ATOM 8 O4' U A 274 68.271 107.759 0.758 1.00 99.47 O
ATOM 9 C3' U A 274 68.310 109.506 2.325 1.00 98.65 C
ATOM 10 O3' U A 274 68.612 109.814 3.682 1.00 98.14 O
ATOM 11 C2' U A 274 69.501 109.688 1.391 1.00 98.62 C
ATOM 12 O2' U A 274 70.722 109.221 1.931 1.00 97.51 O
ATOM 13 C1' U A 274 69.101 108.781 0.225 1.00 98.54 C
ATOM 14 N1 U A 274 68.358 109.476 -0.843 1.00 97.96 N
ATOM 15 C2 U A 274 69.072 110.296 -1.706 1.00 96.97 C
ATOM 16 O2 U A 274 70.279 110.468 -1.616 1.00 96.16 O
ATOM 17 N3 U A 274 68.317 110.910 -2.678 1.00 96.66 N
ATOM 18 C4 U A 274 66.954 110.796 -2.873 1.00 96.57 C
ATOM 19 O4 U A 274 66.414 111.432 -3.783 1.00 96.18 O
ATOM 20 C5 U A 274 66.290 109.937 -1.945 1.00 96.89 C
ATOM 21 C6 U A 274 66.992 109.322 -0.988 1.00 97.54 C
ATOM 22 P C A 275 68.150 111.219 4.304 1.00 97.16 P
ATOM 23 OP1 C A 275 68.527 111.210 5.742 1.00 96.45 O
ATOM 24 OP2 C A 275 66.735 111.438 3.919 1.00 96.87 O
ATOM 25 O5' C A 275 69.061 112.292 3.555 1.00 98.31 O
TER
ATOM 1 O3' C B 272 61.589 107.182 -4.538 1.00134.16 O
ATOM 2 P A B 273 62.471 107.841 -3.361 1.00131.00 P
ATOM 3 OP1 A B 273 61.566 108.088 -2.205 1.00131.47 O
ATOM 4 OP2 A B 273 63.220 108.978 -3.966 1.00130.24 O
ATOM 5 O5' A B 273 63.531 106.719 -2.958 1.00126.69 O
ATOM 6 C5' A B 273 63.168 105.597 -2.130 1.00119.98 C
ATOM 7 C4' A B 273 64.377 105.111 -1.361 1.00115.55 C
ATOM 8 O4' A B 273 65.407 104.704 -2.305 1.00114.16 O
ATOM 9 C3' A B 273 65.065 106.162 -0.501 1.00112.45 C
ATOM 10 O3' A B 273 64.424 106.334 0.760 1.00108.89 O
ATOM 11 C2' A B 273 66.482 105.613 -0.393 1.00111.64 C
ATOM 12 O2' A B 273 66.603 104.552 0.535 1.00110.10 O
ATOM 13 C1' A B 273 66.691 105.068 -1.808 1.00111.48 C
ATOM 14 N9 A B 273 67.278 106.050 -2.727 1.00109.54 N
ATOM 15 C8 A B 273 66.630 106.791 -3.691 1.00108.81 C
ATOM 16 N7 A B 273 67.420 107.588 -4.366 1.00107.84 N
ATOM 17 C5 A B 273 68.673 107.362 -3.814 1.00107.16 C
ATOM 18 C6 A B 273 69.940 107.903 -4.094 1.00106.38 C
ATOM 19 N6 A B 273 70.164 108.813 -5.045 1.00105.52 N
ATOM 20 N1 A B 273 70.983 107.470 -3.355 1.00106.02 N
ATOM 21 C2 A B 273 70.759 106.555 -2.405 1.00106.17 C
ATOM 22 N3 A B 273 69.619 105.969 -2.051 1.00107.03 N
ATOM 23 C4 A B 273 68.601 106.420 -2.802 1.00107.74 C
ATOM 24 P U B 274 64.189 107.816 1.340 1.00105.87 P
ATOM 25 OP1 U B 274 63.490 107.686 2.644 1.00105.63 O
ATOM 26 OP2 U B 274 63.583 108.639 0.261 1.00104.81 O
ATOM 27 O5' U B 274 65.659 108.364 1.617 1.00103.77 O
TER
Atoms:
C4: (66.954,110.796,-2.873)
N3: (68.317,110.910,-2.678)
OP1: (63.490,107.686,2.644)
OP2: (63.583,108.639,0.261)
C2: (69.072,110.296,-1.706)
C1': (69.101,108.781,0.225)
C3': (68.310,109.506,2.325)
O5': (65.659,108.364,1.617)
O4': (68.271,107.759,0.758)
C5': (66.568,107.636,2.462)
P: (64.189,107.816,1.340)
C4': (67.993,108.030,2.156)
C2': (69.501,109.688,1.391)
O2': (70.722,109.221,1.931)
N1: (68.358,109.476,-0.843)
O4: (66.414,111.432,-3.783)
O2: (70.279,110.468,-1.616)
C6: (66.992,109.322,-0.988)
C5: (66.290,109.937,-1.945)
O3': (68.612,109.814,3.682)
N3: (68.317,110.910,-2.678)
OP1: (63.490,107.686,2.644)
OP2: (63.583,108.639,0.261)
C2: (69.072,110.296,-1.706)
C1': (69.101,108.781,0.225)
C3': (68.310,109.506,2.325)
O5': (65.659,108.364,1.617)
O4': (68.271,107.759,0.758)
C5': (66.568,107.636,2.462)
P: (64.189,107.816,1.340)
C4': (67.993,108.030,2.156)
C2': (69.501,109.688,1.391)
O2': (70.722,109.221,1.931)
N1: (68.358,109.476,-0.843)
O4: (66.414,111.432,-3.783)
O2: (70.279,110.468,-1.616)
C6: (66.992,109.322,-0.988)
C5: (66.290,109.937,-1.945)
O3': (68.612,109.814,3.682)
OP1: (61.566,108.088,-2.205)
OP2: (63.220,108.978,-3.966)
C3': (65.065,106.162,-0.501)
C1': (66.691,105.068,-1.808)
C5': (63.168,105.597,-2.130)
O4': (65.407,104.704,-2.305)
C8: (66.630,106.791,-3.691)
O2': (66.603,104.552,0.535)
C6: (69.940,107.903,-4.094)
C5: (68.673,107.362,-3.814)
C4: (68.601,106.420,-2.802)
P: (62.471,107.841,-3.361)
C4': (64.377,105.111,-1.361)
C2': (66.482,105.613,-0.393)
C2: (70.759,106.555,-2.405)
N1: (70.983,107.470,-3.355)
N3: (69.619,105.969,-2.051)
N6: (70.164,108.813,-5.045)
N7: (67.420,107.588,-4.366)
N9: (67.278,106.050,-2.727)
O5': (63.531,106.719,-2.958)
O3': (64.424,106.334,0.760)
OP2: (63.220,108.978,-3.966)
C3': (65.065,106.162,-0.501)
C1': (66.691,105.068,-1.808)
C5': (63.168,105.597,-2.130)
O4': (65.407,104.704,-2.305)
C8: (66.630,106.791,-3.691)
O2': (66.603,104.552,0.535)
C6: (69.940,107.903,-4.094)
C5: (68.673,107.362,-3.814)
C4: (68.601,106.420,-2.802)
P: (62.471,107.841,-3.361)
C4': (64.377,105.111,-1.361)
C2': (66.482,105.613,-0.393)
C2: (70.759,106.555,-2.405)
N1: (70.983,107.470,-3.355)
N3: (69.619,105.969,-2.051)
N6: (70.164,108.813,-5.045)
N7: (67.420,107.588,-4.366)
N9: (67.278,106.050,-2.727)
O5': (63.531,106.719,-2.958)
O3': (64.424,106.334,0.760)
Image (generated by PyMOL):