Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A355:A41
Extra
PDB:
ATOM 1 O3' A A 354 -30.877 49.361 109.269 1.00 6.52 O
ATOM 2 P U A 355 -30.011 48.362 110.176 1.00 29.41 P
ATOM 3 OP1 U A 355 -30.930 47.218 110.483 1.00 28.53 O
ATOM 4 OP2 U A 355 -29.389 49.115 111.286 1.00 29.54 O
ATOM 5 O5' U A 355 -28.822 47.889 109.218 1.00 11.82 O
ATOM 6 C5' U A 355 -28.863 46.610 108.531 1.00 11.76 C
ATOM 7 C4' U A 355 -27.498 46.270 107.983 1.00 11.55 C
ATOM 8 O4' U A 355 -27.073 47.300 107.071 1.00 12.66 O
ATOM 9 C3' U A 355 -26.398 46.213 109.030 1.00 12.11 C
ATOM 10 O3' U A 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 11 C2' U A 355 -25.130 46.626 108.278 1.00 12.22 C
ATOM 12 O2' U A 355 -24.190 45.608 108.009 1.00 12.59 O
ATOM 13 C1' U A 355 -25.668 47.284 107.007 1.00 12.15 C
ATOM 14 N1 U A 355 -25.164 48.650 106.860 1.00 16.50 N
ATOM 15 C2 U A 355 -25.653 49.636 107.688 1.00 16.26 C
ATOM 16 O2 U A 355 -26.540 49.438 108.507 1.00 18.53 O
ATOM 17 N3 U A 355 -25.064 50.863 107.518 1.00 17.69 N
ATOM 18 C4 U A 355 -24.063 51.182 106.617 1.00 17.47 C
ATOM 19 O4 U A 355 -23.533 52.290 106.661 1.00 18.02 O
ATOM 20 C5 U A 355 -23.654 50.110 105.784 1.00 17.15 C
ATOM 21 C6 U A 355 -24.205 48.914 105.932 1.00 16.29 C
ATOM 22 P C A 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 23 OP1 C A 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 24 OP2 C A 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 25 O5' C A 356 -26.904 42.893 110.851 1.00 31.81 O
TER
ATOM 1 O3' U B 40 -20.027 43.997 99.203 1.00 16.62 O
ATOM 2 P G B 41 -19.245 44.138 100.595 1.00 22.80 P
ATOM 3 OP1 G B 41 -18.366 45.323 100.524 1.00 18.65 O
ATOM 4 OP2 G B 41 -18.639 42.831 100.902 1.00 17.06 O
ATOM 5 O5' G B 41 -20.422 44.397 101.631 1.00 15.21 O
ATOM 6 C5' G B 41 -21.107 45.647 101.631 1.00 15.54 C
ATOM 7 C4' G B 41 -22.288 45.602 102.558 1.00 16.47 C
ATOM 8 O4' G B 41 -23.242 44.645 102.053 1.00 16.56 O
ATOM 9 C3' G B 41 -22.023 45.152 103.984 1.00 17.37 C
ATOM 10 O3' G B 41 -21.576 46.222 104.791 1.00 18.23 O
ATOM 11 C2' G B 41 -23.389 44.656 104.432 1.00 17.07 C
ATOM 12 O2' G B 41 -24.251 45.688 104.877 1.00 16.79 O
ATOM 13 C1' G B 41 -23.934 44.056 103.136 1.00 16.43 C
ATOM 14 N9 G B 41 -23.714 42.620 103.089 1.00 37.80 N
ATOM 15 C8 G B 41 -22.627 41.961 102.570 1.00 37.69 C
ATOM 16 N7 G B 41 -22.694 40.669 102.727 1.00 36.69 N
ATOM 17 C5 G B 41 -23.905 40.467 103.380 1.00 35.77 C
ATOM 18 C6 G B 41 -24.516 39.273 103.836 1.00 35.11 C
ATOM 19 O6 G B 41 -24.091 38.112 103.758 1.00 33.58 O
ATOM 20 N1 G B 41 -25.745 39.525 104.442 1.00 36.44 N
ATOM 21 C2 G B 41 -26.307 40.758 104.595 1.00 37.52 C
ATOM 22 N2 G B 41 -27.503 40.783 105.191 1.00 39.35 N
ATOM 23 N3 G B 41 -25.742 41.879 104.190 1.00 36.47 N
ATOM 24 C4 G B 41 -24.550 41.660 103.594 1.00 36.26 C
ATOM 25 P C B 42 -20.391 45.980 105.843 1.00 28.79 P
ATOM 26 OP1 C B 42 -19.095 45.921 105.095 1.00 0.79 O
ATOM 27 OP2 C B 42 -20.798 44.847 106.739 1.00 0.79 O
ATOM 28 O5' C B 42 -20.358 47.326 106.689 1.00 32.54 O
TER
ATOM 2 P U A 355 -30.011 48.362 110.176 1.00 29.41 P
ATOM 3 OP1 U A 355 -30.930 47.218 110.483 1.00 28.53 O
ATOM 4 OP2 U A 355 -29.389 49.115 111.286 1.00 29.54 O
ATOM 5 O5' U A 355 -28.822 47.889 109.218 1.00 11.82 O
ATOM 6 C5' U A 355 -28.863 46.610 108.531 1.00 11.76 C
ATOM 7 C4' U A 355 -27.498 46.270 107.983 1.00 11.55 C
ATOM 8 O4' U A 355 -27.073 47.300 107.071 1.00 12.66 O
ATOM 9 C3' U A 355 -26.398 46.213 109.030 1.00 12.11 C
ATOM 10 O3' U A 355 -26.279 44.873 109.465 1.00 12.79 O
ATOM 11 C2' U A 355 -25.130 46.626 108.278 1.00 12.22 C
ATOM 12 O2' U A 355 -24.190 45.608 108.009 1.00 12.59 O
ATOM 13 C1' U A 355 -25.668 47.284 107.007 1.00 12.15 C
ATOM 14 N1 U A 355 -25.164 48.650 106.860 1.00 16.50 N
ATOM 15 C2 U A 355 -25.653 49.636 107.688 1.00 16.26 C
ATOM 16 O2 U A 355 -26.540 49.438 108.507 1.00 18.53 O
ATOM 17 N3 U A 355 -25.064 50.863 107.518 1.00 17.69 N
ATOM 18 C4 U A 355 -24.063 51.182 106.617 1.00 17.47 C
ATOM 19 O4 U A 355 -23.533 52.290 106.661 1.00 18.02 O
ATOM 20 C5 U A 355 -23.654 50.110 105.784 1.00 17.15 C
ATOM 21 C6 U A 355 -24.205 48.914 105.932 1.00 16.29 C
ATOM 22 P C A 356 -26.729 44.472 110.941 1.00 41.88 P
ATOM 23 OP1 C A 356 -28.074 45.066 111.188 1.00 50.39 O
ATOM 24 OP2 C A 356 -25.596 44.763 111.876 1.00 49.89 O
ATOM 25 O5' C A 356 -26.904 42.893 110.851 1.00 31.81 O
TER
ATOM 1 O3' U B 40 -20.027 43.997 99.203 1.00 16.62 O
ATOM 2 P G B 41 -19.245 44.138 100.595 1.00 22.80 P
ATOM 3 OP1 G B 41 -18.366 45.323 100.524 1.00 18.65 O
ATOM 4 OP2 G B 41 -18.639 42.831 100.902 1.00 17.06 O
ATOM 5 O5' G B 41 -20.422 44.397 101.631 1.00 15.21 O
ATOM 6 C5' G B 41 -21.107 45.647 101.631 1.00 15.54 C
ATOM 7 C4' G B 41 -22.288 45.602 102.558 1.00 16.47 C
ATOM 8 O4' G B 41 -23.242 44.645 102.053 1.00 16.56 O
ATOM 9 C3' G B 41 -22.023 45.152 103.984 1.00 17.37 C
ATOM 10 O3' G B 41 -21.576 46.222 104.791 1.00 18.23 O
ATOM 11 C2' G B 41 -23.389 44.656 104.432 1.00 17.07 C
ATOM 12 O2' G B 41 -24.251 45.688 104.877 1.00 16.79 O
ATOM 13 C1' G B 41 -23.934 44.056 103.136 1.00 16.43 C
ATOM 14 N9 G B 41 -23.714 42.620 103.089 1.00 37.80 N
ATOM 15 C8 G B 41 -22.627 41.961 102.570 1.00 37.69 C
ATOM 16 N7 G B 41 -22.694 40.669 102.727 1.00 36.69 N
ATOM 17 C5 G B 41 -23.905 40.467 103.380 1.00 35.77 C
ATOM 18 C6 G B 41 -24.516 39.273 103.836 1.00 35.11 C
ATOM 19 O6 G B 41 -24.091 38.112 103.758 1.00 33.58 O
ATOM 20 N1 G B 41 -25.745 39.525 104.442 1.00 36.44 N
ATOM 21 C2 G B 41 -26.307 40.758 104.595 1.00 37.52 C
ATOM 22 N2 G B 41 -27.503 40.783 105.191 1.00 39.35 N
ATOM 23 N3 G B 41 -25.742 41.879 104.190 1.00 36.47 N
ATOM 24 C4 G B 41 -24.550 41.660 103.594 1.00 36.26 C
ATOM 25 P C B 42 -20.391 45.980 105.843 1.00 28.79 P
ATOM 26 OP1 C B 42 -19.095 45.921 105.095 1.00 0.79 O
ATOM 27 OP2 C B 42 -20.798 44.847 106.739 1.00 0.79 O
ATOM 28 O5' C B 42 -20.358 47.326 106.689 1.00 32.54 O
TER
Atoms:
C4: (-24.063,51.182,106.617)
N3: (-25.064,50.863,107.518)
OP1: (-30.930,47.218,110.483)
OP2: (-29.389,49.115,111.286)
C2: (-25.653,49.636,107.688)
C1': (-25.668,47.284,107.007)
C3': (-26.398,46.213,109.030)
O5': (-28.822,47.889,109.218)
O4': (-27.073,47.300,107.071)
C5': (-28.863,46.610,108.531)
P: (-30.011,48.362,110.176)
C4': (-27.498,46.270,107.983)
C2': (-25.130,46.626,108.278)
O2': (-24.190,45.608,108.009)
N1: (-25.164,48.650,106.860)
O4: (-23.533,52.290,106.661)
O2: (-26.540,49.438,108.507)
C6: (-24.205,48.914,105.932)
C5: (-23.654,50.110,105.784)
O3': (-26.279,44.873,109.465)
N3: (-25.064,50.863,107.518)
OP1: (-30.930,47.218,110.483)
OP2: (-29.389,49.115,111.286)
C2: (-25.653,49.636,107.688)
C1': (-25.668,47.284,107.007)
C3': (-26.398,46.213,109.030)
O5': (-28.822,47.889,109.218)
O4': (-27.073,47.300,107.071)
C5': (-28.863,46.610,108.531)
P: (-30.011,48.362,110.176)
C4': (-27.498,46.270,107.983)
C2': (-25.130,46.626,108.278)
O2': (-24.190,45.608,108.009)
N1: (-25.164,48.650,106.860)
O4: (-23.533,52.290,106.661)
O2: (-26.540,49.438,108.507)
C6: (-24.205,48.914,105.932)
C5: (-23.654,50.110,105.784)
O3': (-26.279,44.873,109.465)
OP1: (-18.366,45.323,100.524)
OP2: (-18.639,42.831,100.902)
C3': (-22.023,45.152,103.984)
C1': (-23.934,44.056,103.136)
C5': (-21.107,45.647,101.631)
O6: (-24.091,38.112,103.758)
O4': (-23.242,44.645,102.053)
C8: (-22.627,41.961,102.570)
C2: (-26.307,40.758,104.595)
C6: (-24.516,39.273,103.836)
C5: (-23.905,40.467,103.380)
C4: (-24.550,41.660,103.594)
P: (-19.245,44.138,100.595)
C4': (-22.288,45.602,102.558)
C2': (-23.389,44.656,104.432)
O2': (-24.251,45.688,104.877)
N1: (-25.745,39.525,104.442)
N2: (-27.503,40.783,105.191)
N3: (-25.742,41.879,104.190)
N7: (-22.694,40.669,102.727)
N9: (-23.714,42.620,103.089)
O5': (-20.422,44.397,101.631)
O3': (-21.576,46.222,104.791)
OP2: (-18.639,42.831,100.902)
C3': (-22.023,45.152,103.984)
C1': (-23.934,44.056,103.136)
C5': (-21.107,45.647,101.631)
O6: (-24.091,38.112,103.758)
O4': (-23.242,44.645,102.053)
C8: (-22.627,41.961,102.570)
C2: (-26.307,40.758,104.595)
C6: (-24.516,39.273,103.836)
C5: (-23.905,40.467,103.380)
C4: (-24.550,41.660,103.594)
P: (-19.245,44.138,100.595)
C4': (-22.288,45.602,102.558)
C2': (-23.389,44.656,104.432)
O2': (-24.251,45.688,104.877)
N1: (-25.745,39.525,104.442)
N2: (-27.503,40.783,105.191)
N3: (-25.742,41.879,104.190)
N7: (-22.694,40.669,102.727)
N9: (-23.714,42.620,103.089)
O5': (-20.422,44.397,101.631)
O3': (-21.576,46.222,104.791)
Image (generated by PyMOL):