ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A242:A241

Extra

PDB:
ATOM 1 O3' G A 241 37.857 -2.130 41.399 1.00 95.34 O
ATOM 2 P U A 242 39.300 -1.733 40.806 1.00 98.29 P
ATOM 3 OP1 U A 242 40.081 -2.989 40.658 1.00105.58 O
ATOM 4 OP2 U A 242 39.846 -0.658 41.670 1.00103.39 O
ATOM 5 O5' U A 242 38.939 -1.152 39.367 1.00 88.16 O
ATOM 6 C5' U A 242 38.004 -0.087 39.216 1.00 86.56 C
ATOM 7 C4' U A 242 38.123 0.567 37.855 1.00 84.34 C
ATOM 8 O4' U A 242 37.813 -0.399 36.820 1.00 94.04 O
ATOM 9 C3' U A 242 37.179 1.735 37.581 1.00 82.61 C
ATOM 10 O3' U A 242 37.675 2.971 38.078 1.00 87.36 O
ATOM 11 C2' U A 242 37.042 1.717 36.061 1.00 82.04 C
ATOM 12 O2' U A 242 38.136 2.385 35.453 1.00 77.00 O
ATOM 13 C1' U A 242 37.157 0.228 35.746 1.00 84.00 C
ATOM 14 N1 U A 242 35.844 -0.417 35.558 1.00 92.76 N
ATOM 15 C2 U A 242 35.048 0.013 34.507 1.00 99.60 C
ATOM 16 O2 U A 242 35.372 0.925 33.767 1.00 97.62 O
ATOM 17 N3 U A 242 33.849 -0.647 34.365 1.00 94.99 N
ATOM 18 C4 U A 242 33.401 -1.688 35.153 1.00 97.15 C
ATOM 19 O4 U A 242 32.310 -2.189 34.918 1.00 89.81 O
ATOM 20 C5 U A 242 34.289 -2.084 36.209 1.00 98.28 C
ATOM 21 C6 U A 242 35.456 -1.454 36.374 1.00 90.60 C
ATOM 22 P U A 243 37.046 3.646 39.399 1.00 87.75 P
ATOM 23 OP1 U A 243 38.057 4.612 39.910 1.00 82.21 O
ATOM 24 OP2 U A 243 36.588 2.543 40.291 1.00 84.55 O
ATOM 25 O5' U A 243 35.799 4.435 38.829 1.00 81.92 O
TER

ATOM 1 O3' A B 240 39.018 -6.368 35.901 1.00126.15 O
ATOM 2 P G B 241 37.796 -6.437 36.947 1.00120.03 P
ATOM 3 OP1 G B 241 38.019 -7.639 37.789 1.00109.45 O
ATOM 4 OP2 G B 241 36.535 -6.339 36.159 1.00 94.32 O
ATOM 5 O5' G B 241 37.998 -5.128 37.834 1.00111.90 O
ATOM 6 C5' G B 241 37.437 -5.043 39.143 1.00109.73 C
ATOM 7 C4' G B 241 37.266 -3.609 39.602 1.00 99.56 C
ATOM 8 O4' G B 241 35.970 -3.115 39.165 1.00 96.15 O
ATOM 9 C3' G B 241 37.300 -3.409 41.112 1.00 98.83 C
ATOM 10 O3' G B 241 37.857 -2.130 41.399 1.00 95.34 O
ATOM 11 C2' G B 241 35.820 -3.433 41.488 1.00 96.70 C
ATOM 12 O2' G B 241 35.503 -2.784 42.702 1.00 96.80 O
ATOM 13 C1' G B 241 35.190 -2.740 40.288 1.00 94.65 C
ATOM 14 N9 G B 241 33.813 -3.152 40.028 1.00 93.77 N
ATOM 15 C8 G B 241 33.344 -4.445 39.975 1.00105.07 C
ATOM 16 N7 G B 241 32.062 -4.521 39.701 1.00112.38 N
ATOM 17 C5 G B 241 31.656 -3.192 39.559 1.00106.80 C
ATOM 18 C6 G B 241 30.371 -2.635 39.257 1.00101.50 C
ATOM 19 O6 G B 241 29.293 -3.215 39.047 1.00 97.70 O
ATOM 20 N1 G B 241 30.428 -1.242 39.211 1.00101.60 N
ATOM 21 C2 G B 241 31.564 -0.485 39.425 1.00 97.15 C
ATOM 22 N2 G B 241 31.424 0.846 39.334 1.00 94.26 N
ATOM 23 N3 G B 241 32.758 -0.989 39.707 1.00 94.98 N
ATOM 24 C4 G B 241 32.736 -2.338 39.758 1.00 98.10 C
ATOM 25 P U B 242 39.300 -1.733 40.806 1.00 98.29 P
ATOM 26 OP1 U B 242 40.081 -2.989 40.658 1.00105.58 O
ATOM 27 OP2 U B 242 39.846 -0.658 41.670 1.00103.39 O
ATOM 28 O5' U B 242 38.939 -1.152 39.367 1.00 88.16 O
TER

Atoms:
C4: (33.401,-1.688,35.153)
N3: (33.849,-0.647,34.365)
OP1: (40.081,-2.989,40.658)
OP2: (39.846,-0.658,41.670)
C2: (35.048,0.013,34.507)
C1': (37.157,0.228,35.746)
C3': (37.179,1.735,37.581)
O5': (38.939,-1.152,39.367)
O4': (37.813,-0.399,36.820)
C5': (38.004,-0.087,39.216)
P: (39.300,-1.733,40.806)
C4': (38.123,0.567,37.855)
C2': (37.042,1.717,36.061)
O2': (38.136,2.385,35.453)
N1: (35.844,-0.417,35.558)
O4: (32.310,-2.189,34.918)
O2: (35.372,0.925,33.767)
C6: (35.456,-1.454,36.374)
C5: (34.289,-2.084,36.209)
O3': (37.675,2.971,38.078)
OP1: (38.019,-7.639,37.789)
OP2: (36.535,-6.339,36.159)
C3': (37.300,-3.409,41.112)
C1': (35.190,-2.740,40.288)
C5': (37.437,-5.043,39.143)
O6: (29.293,-3.215,39.047)
O4': (35.970,-3.115,39.165)
C8: (33.344,-4.445,39.975)
C2: (31.564,-0.485,39.425)
C6: (30.371,-2.635,39.257)
C5: (31.656,-3.192,39.559)
C4: (32.736,-2.338,39.758)
P: (37.796,-6.437,36.947)
C4': (37.266,-3.609,39.602)
C2': (35.820,-3.433,41.488)
O2': (35.503,-2.784,42.702)
N1: (30.428,-1.242,39.211)
N2: (31.424,0.846,39.334)
N3: (32.758,-0.989,39.707)
N7: (32.062,-4.521,39.701)
N9: (33.813,-3.152,40.028)
O5': (37.998,-5.128,37.834)
O3': (37.857,-2.130,41.399)
Image (generated by PyMOL):
PyMOL image
show in jmol