Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0274:0273
Extra
PDB:
ATOM 1 O3' A A 273 64.484 106.523 1.104 1.00121.28 O
ATOM 2 P U A 274 64.184 108.004 1.664 1.00119.78 P
ATOM 3 OP1 U A 274 63.469 107.876 2.965 1.00119.34 O
ATOM 4 OP2 U A 274 63.564 108.791 0.561 1.00118.86 O
ATOM 5 O5' U A 274 65.631 108.610 1.945 1.00116.49 O
ATOM 6 C5' U A 274 66.590 107.888 2.739 1.00111.84 C
ATOM 7 C4' U A 274 67.993 108.243 2.314 1.00109.12 C
ATOM 8 O4' U A 274 68.155 107.941 0.904 1.00108.11 O
ATOM 9 C3' U A 274 68.356 109.714 2.413 1.00107.99 C
ATOM 10 O3' U A 274 68.741 110.067 3.732 1.00107.87 O
ATOM 11 C2' U A 274 69.502 109.831 1.418 1.00107.78 C
ATOM 12 O2' U A 274 70.739 109.362 1.925 1.00106.54 O
ATOM 13 C1' U A 274 69.019 108.898 0.304 1.00107.46 C
ATOM 14 N1 U A 274 68.288 109.591 -0.775 1.00106.14 N
ATOM 15 C2 U A 274 69.034 110.214 -1.772 1.00104.77 C
ATOM 16 O2 U A 274 70.258 110.208 -1.796 1.00103.55 O
ATOM 17 N3 U A 274 68.293 110.845 -2.740 1.00104.25 N
ATOM 18 C4 U A 274 66.916 110.919 -2.821 1.00104.42 C
ATOM 19 O4 U A 274 66.398 111.533 -3.757 1.00104.52 O
ATOM 20 C5 U A 274 66.217 110.253 -1.765 1.00104.41 C
ATOM 21 C6 U A 274 66.905 109.628 -0.804 1.00105.40 C
ATOM 22 P C A 275 68.170 111.411 4.395 1.00107.81 P
ATOM 23 OP1 C A 275 68.411 111.293 5.855 1.00108.05 O
ATOM 24 OP2 C A 275 66.787 111.629 3.896 1.00107.26 O
ATOM 25 O5' C A 275 69.108 112.567 3.820 1.00108.26 O
TER
ATOM 1 O3' C B 272 62.171 107.938 -4.425 1.00143.30 O
ATOM 2 P A B 273 62.371 108.076 -2.839 1.00140.95 P
ATOM 3 OP1 A B 273 61.084 107.700 -2.189 1.00141.29 O
ATOM 4 OP2 A B 273 62.962 109.415 -2.575 1.00141.10 O
ATOM 5 O5' A B 273 63.475 106.974 -2.503 1.00137.19 O
ATOM 6 C5' A B 273 63.152 105.789 -1.742 1.00130.66 C
ATOM 7 C4' A B 273 64.379 105.298 -1.008 1.00126.12 C
ATOM 8 O4' A B 273 65.376 104.868 -1.975 1.00124.40 O
ATOM 9 C3' A B 273 65.087 106.359 -0.180 1.00123.52 C
ATOM 10 O3' A B 273 64.484 106.523 1.104 1.00121.28 O
ATOM 11 C2' A B 273 66.517 105.834 -0.128 1.00122.30 C
ATOM 12 O2' A B 273 66.695 104.804 0.821 1.00121.58 O
ATOM 13 C1' A B 273 66.671 105.252 -1.537 1.00121.87 C
ATOM 14 N9 A B 273 67.218 106.199 -2.515 1.00119.92 N
ATOM 15 C8 A B 273 66.520 106.933 -3.447 1.00119.38 C
ATOM 16 N7 A B 273 67.278 107.697 -4.194 1.00118.47 N
ATOM 17 C5 A B 273 68.561 107.454 -3.727 1.00117.58 C
ATOM 18 C6 A B 273 69.817 107.961 -4.107 1.00116.72 C
ATOM 19 N6 A B 273 69.995 108.847 -5.091 1.00115.35 N
ATOM 20 N1 A B 273 70.900 107.522 -3.432 1.00116.70 N
ATOM 21 C2 A B 273 70.724 106.631 -2.448 1.00116.89 C
ATOM 22 N3 A B 273 69.599 106.075 -2.004 1.00117.56 N
ATOM 23 C4 A B 273 68.540 106.535 -2.691 1.00118.06 C
ATOM 24 P U B 274 64.184 108.004 1.664 1.00119.78 P
ATOM 25 OP1 U B 274 63.469 107.876 2.965 1.00119.34 O
ATOM 26 OP2 U B 274 63.564 108.791 0.561 1.00118.86 O
ATOM 27 O5' U B 274 65.631 108.610 1.945 1.00116.49 O
TER
ATOM 2 P U A 274 64.184 108.004 1.664 1.00119.78 P
ATOM 3 OP1 U A 274 63.469 107.876 2.965 1.00119.34 O
ATOM 4 OP2 U A 274 63.564 108.791 0.561 1.00118.86 O
ATOM 5 O5' U A 274 65.631 108.610 1.945 1.00116.49 O
ATOM 6 C5' U A 274 66.590 107.888 2.739 1.00111.84 C
ATOM 7 C4' U A 274 67.993 108.243 2.314 1.00109.12 C
ATOM 8 O4' U A 274 68.155 107.941 0.904 1.00108.11 O
ATOM 9 C3' U A 274 68.356 109.714 2.413 1.00107.99 C
ATOM 10 O3' U A 274 68.741 110.067 3.732 1.00107.87 O
ATOM 11 C2' U A 274 69.502 109.831 1.418 1.00107.78 C
ATOM 12 O2' U A 274 70.739 109.362 1.925 1.00106.54 O
ATOM 13 C1' U A 274 69.019 108.898 0.304 1.00107.46 C
ATOM 14 N1 U A 274 68.288 109.591 -0.775 1.00106.14 N
ATOM 15 C2 U A 274 69.034 110.214 -1.772 1.00104.77 C
ATOM 16 O2 U A 274 70.258 110.208 -1.796 1.00103.55 O
ATOM 17 N3 U A 274 68.293 110.845 -2.740 1.00104.25 N
ATOM 18 C4 U A 274 66.916 110.919 -2.821 1.00104.42 C
ATOM 19 O4 U A 274 66.398 111.533 -3.757 1.00104.52 O
ATOM 20 C5 U A 274 66.217 110.253 -1.765 1.00104.41 C
ATOM 21 C6 U A 274 66.905 109.628 -0.804 1.00105.40 C
ATOM 22 P C A 275 68.170 111.411 4.395 1.00107.81 P
ATOM 23 OP1 C A 275 68.411 111.293 5.855 1.00108.05 O
ATOM 24 OP2 C A 275 66.787 111.629 3.896 1.00107.26 O
ATOM 25 O5' C A 275 69.108 112.567 3.820 1.00108.26 O
TER
ATOM 1 O3' C B 272 62.171 107.938 -4.425 1.00143.30 O
ATOM 2 P A B 273 62.371 108.076 -2.839 1.00140.95 P
ATOM 3 OP1 A B 273 61.084 107.700 -2.189 1.00141.29 O
ATOM 4 OP2 A B 273 62.962 109.415 -2.575 1.00141.10 O
ATOM 5 O5' A B 273 63.475 106.974 -2.503 1.00137.19 O
ATOM 6 C5' A B 273 63.152 105.789 -1.742 1.00130.66 C
ATOM 7 C4' A B 273 64.379 105.298 -1.008 1.00126.12 C
ATOM 8 O4' A B 273 65.376 104.868 -1.975 1.00124.40 O
ATOM 9 C3' A B 273 65.087 106.359 -0.180 1.00123.52 C
ATOM 10 O3' A B 273 64.484 106.523 1.104 1.00121.28 O
ATOM 11 C2' A B 273 66.517 105.834 -0.128 1.00122.30 C
ATOM 12 O2' A B 273 66.695 104.804 0.821 1.00121.58 O
ATOM 13 C1' A B 273 66.671 105.252 -1.537 1.00121.87 C
ATOM 14 N9 A B 273 67.218 106.199 -2.515 1.00119.92 N
ATOM 15 C8 A B 273 66.520 106.933 -3.447 1.00119.38 C
ATOM 16 N7 A B 273 67.278 107.697 -4.194 1.00118.47 N
ATOM 17 C5 A B 273 68.561 107.454 -3.727 1.00117.58 C
ATOM 18 C6 A B 273 69.817 107.961 -4.107 1.00116.72 C
ATOM 19 N6 A B 273 69.995 108.847 -5.091 1.00115.35 N
ATOM 20 N1 A B 273 70.900 107.522 -3.432 1.00116.70 N
ATOM 21 C2 A B 273 70.724 106.631 -2.448 1.00116.89 C
ATOM 22 N3 A B 273 69.599 106.075 -2.004 1.00117.56 N
ATOM 23 C4 A B 273 68.540 106.535 -2.691 1.00118.06 C
ATOM 24 P U B 274 64.184 108.004 1.664 1.00119.78 P
ATOM 25 OP1 U B 274 63.469 107.876 2.965 1.00119.34 O
ATOM 26 OP2 U B 274 63.564 108.791 0.561 1.00118.86 O
ATOM 27 O5' U B 274 65.631 108.610 1.945 1.00116.49 O
TER
Atoms:
C4: (66.916,110.919,-2.821)
N3: (68.293,110.845,-2.740)
OP1: (63.469,107.876,2.965)
OP2: (63.564,108.791,0.561)
C2: (69.034,110.214,-1.772)
C1': (69.019,108.898,0.304)
C3': (68.356,109.714,2.413)
O5': (65.631,108.610,1.945)
O4': (68.155,107.941,0.904)
C5': (66.590,107.888,2.739)
P: (64.184,108.004,1.664)
C4': (67.993,108.243,2.314)
C2': (69.502,109.831,1.418)
O2': (70.739,109.362,1.925)
N1: (68.288,109.591,-0.775)
O4: (66.398,111.533,-3.757)
O2: (70.258,110.208,-1.796)
C6: (66.905,109.628,-0.804)
C5: (66.217,110.253,-1.765)
O3': (68.741,110.067,3.732)
N3: (68.293,110.845,-2.740)
OP1: (63.469,107.876,2.965)
OP2: (63.564,108.791,0.561)
C2: (69.034,110.214,-1.772)
C1': (69.019,108.898,0.304)
C3': (68.356,109.714,2.413)
O5': (65.631,108.610,1.945)
O4': (68.155,107.941,0.904)
C5': (66.590,107.888,2.739)
P: (64.184,108.004,1.664)
C4': (67.993,108.243,2.314)
C2': (69.502,109.831,1.418)
O2': (70.739,109.362,1.925)
N1: (68.288,109.591,-0.775)
O4: (66.398,111.533,-3.757)
O2: (70.258,110.208,-1.796)
C6: (66.905,109.628,-0.804)
C5: (66.217,110.253,-1.765)
O3': (68.741,110.067,3.732)
OP1: (61.084,107.700,-2.189)
OP2: (62.962,109.415,-2.575)
C3': (65.087,106.359,-0.180)
C1': (66.671,105.252,-1.537)
C5': (63.152,105.789,-1.742)
O4': (65.376,104.868,-1.975)
C8: (66.520,106.933,-3.447)
O2': (66.695,104.804,0.821)
C6: (69.817,107.961,-4.107)
C5: (68.561,107.454,-3.727)
C4: (68.540,106.535,-2.691)
P: (62.371,108.076,-2.839)
C4': (64.379,105.298,-1.008)
C2': (66.517,105.834,-0.128)
C2: (70.724,106.631,-2.448)
N1: (70.900,107.522,-3.432)
N3: (69.599,106.075,-2.004)
N6: (69.995,108.847,-5.091)
N7: (67.278,107.697,-4.194)
N9: (67.218,106.199,-2.515)
O5': (63.475,106.974,-2.503)
O3': (64.484,106.523,1.104)
OP2: (62.962,109.415,-2.575)
C3': (65.087,106.359,-0.180)
C1': (66.671,105.252,-1.537)
C5': (63.152,105.789,-1.742)
O4': (65.376,104.868,-1.975)
C8: (66.520,106.933,-3.447)
O2': (66.695,104.804,0.821)
C6: (69.817,107.961,-4.107)
C5: (68.561,107.454,-3.727)
C4: (68.540,106.535,-2.691)
P: (62.371,108.076,-2.839)
C4': (64.379,105.298,-1.008)
C2': (66.517,105.834,-0.128)
C2: (70.724,106.631,-2.448)
N1: (70.900,107.522,-3.432)
N3: (69.599,106.075,-2.004)
N6: (69.995,108.847,-5.091)
N7: (67.278,107.697,-4.194)
N9: (67.218,106.199,-2.515)
O5': (63.475,106.974,-2.503)
O3': (64.484,106.523,1.104)
Image (generated by PyMOL):