ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HVY:E47:E46

Extra

PDB:
ATOM 1 O3' A A 46 -38.429 6.185 27.334 1.00 44.72 O
ATOM 2 P U A 47 -38.447 7.771 27.566 1.00 45.02 P
ATOM 3 OP1 U A 47 -37.551 8.390 26.562 1.00 45.14 O
ATOM 4 OP2 U A 47 -38.213 8.033 29.005 1.00 44.89 O
ATOM 5 O5' U A 47 -39.967 8.160 27.243 1.00 44.81 O
ATOM 6 C5' U A 47 -40.443 8.222 25.900 1.00 44.60 C
ATOM 7 C4' U A 47 -41.960 8.207 25.859 1.00 44.38 C
ATOM 8 O4' U A 47 -42.456 7.026 26.543 1.00 44.25 O
ATOM 9 C3' U A 47 -42.654 9.352 26.584 1.00 44.41 C
ATOM 10 O3' U A 47 -42.667 10.551 25.809 1.00 44.58 O
ATOM 11 C2' U A 47 -44.045 8.758 26.791 1.00 44.23 C
ATOM 12 O2' U A 47 -44.854 8.782 25.629 1.00 44.26 O
ATOM 13 C1' U A 47 -43.697 7.319 27.169 1.00 43.96 C
ATOM 14 N1 U A 47 -43.618 7.083 28.664 1.00 43.75 N
ATOM 15 C2 U A 47 -44.787 6.956 29.406 1.00 43.62 C
ATOM 16 O2 U A 47 -45.910 7.020 28.934 1.00 43.58 O
ATOM 17 N3 U A 47 -44.599 6.747 30.754 1.00 43.62 N
ATOM 18 C4 U A 47 -43.392 6.650 31.427 1.00 43.68 C
ATOM 19 O4 U A 47 -43.383 6.459 32.639 1.00 43.67 O
ATOM 20 C5 U A 47 -42.221 6.792 30.596 1.00 43.62 C
ATOM 21 C6 U A 47 -42.378 6.998 29.280 1.00 43.63 C
ATOM 22 P G A 48 -42.497 11.979 26.522 1.00 44.83 P
ATOM 23 OP1 G A 48 -42.420 12.999 25.451 1.00 45.13 O
ATOM 24 OP2 G A 48 -41.400 11.895 27.513 1.00 44.65 O
ATOM 25 O5' G A 48 -43.873 12.154 27.327 1.00 44.21 O
TER

ATOM 1 P A B 46 -38.682 5.341 32.671 1.00 44.41 P
ATOM 2 OP1 A B 46 -38.123 6.712 32.678 1.00 44.58 O
ATOM 3 OP2 A B 46 -37.964 4.243 33.357 1.00 44.45 O
ATOM 4 O5' A B 46 -38.953 4.893 31.159 1.00 44.37 O
ATOM 5 C5' A B 46 -37.876 4.744 30.236 1.00 44.36 C
ATOM 6 C4' A B 46 -38.382 4.304 28.871 1.00 44.45 C
ATOM 7 O4' A B 46 -39.226 3.133 29.016 1.00 44.45 O
ATOM 8 C3' A B 46 -39.240 5.330 28.141 1.00 44.55 C
ATOM 9 O3' A B 46 -38.429 6.185 27.334 1.00 44.72 O
ATOM 10 C2' A B 46 -40.178 4.461 27.306 1.00 44.51 C
ATOM 11 O2' A B 46 -39.616 4.048 26.074 1.00 44.54 O
ATOM 12 C1' A B 46 -40.394 3.255 28.221 1.00 44.34 C
ATOM 13 N9 A B 46 -41.571 3.342 29.097 1.00 44.24 N
ATOM 14 C8 A B 46 -41.578 3.275 30.465 1.00 44.20 C
ATOM 15 N7 A B 46 -42.767 3.376 31.006 1.00 44.16 N
ATOM 16 C5 A B 46 -43.611 3.519 29.919 1.00 44.21 C
ATOM 17 C6 A B 46 -45.013 3.671 29.817 1.00 44.23 C
ATOM 18 N6 A B 46 -45.826 3.707 30.878 1.00 44.25 N
ATOM 19 N1 A B 46 -45.551 3.787 28.581 1.00 44.22 N
ATOM 20 C2 A B 46 -44.736 3.752 27.516 1.00 44.24 C
ATOM 21 N3 A B 46 -43.408 3.611 27.489 1.00 44.28 N
ATOM 22 C4 A B 46 -42.895 3.497 28.732 1.00 44.23 C
ATOM 23 P U B 47 -38.447 7.771 27.566 1.00 45.02 P
ATOM 24 OP1 U B 47 -37.551 8.390 26.562 1.00 45.14 O
ATOM 25 OP2 U B 47 -38.213 8.033 29.005 1.00 44.89 O
ATOM 26 O5' U B 47 -39.967 8.160 27.243 1.00 44.81 O
TER

Atoms:
C4: (-43.392,6.650,31.427)
N3: (-44.599,6.747,30.754)
OP1: (-37.551,8.390,26.562)
OP2: (-38.213,8.033,29.005)
C2: (-44.787,6.956,29.406)
C1': (-43.697,7.319,27.169)
C3': (-42.654,9.352,26.584)
O5': (-39.967,8.160,27.243)
O4': (-42.456,7.026,26.543)
C5': (-40.443,8.222,25.900)
P: (-38.447,7.771,27.566)
C4': (-41.960,8.207,25.859)
C2': (-44.045,8.758,26.791)
O2': (-44.854,8.782,25.629)
N1: (-43.618,7.083,28.664)
O4: (-43.383,6.459,32.639)
O2: (-45.910,7.020,28.934)
C6: (-42.378,6.998,29.280)
C5: (-42.221,6.792,30.596)
O3': (-42.667,10.551,25.809)
OP1: (-38.123,6.712,32.678)
OP2: (-37.964,4.243,33.357)
C3': (-39.240,5.330,28.141)
C1': (-40.394,3.255,28.221)
C5': (-37.876,4.744,30.236)
O4': (-39.226,3.133,29.016)
C8: (-41.578,3.275,30.465)
O2': (-39.616,4.048,26.074)
C6: (-45.013,3.671,29.817)
C5: (-43.611,3.519,29.919)
C4: (-42.895,3.497,28.732)
P: (-38.682,5.341,32.671)
C4': (-38.382,4.304,28.871)
C2': (-40.178,4.461,27.306)
C2: (-44.736,3.752,27.516)
N1: (-45.551,3.787,28.581)
N3: (-43.408,3.611,27.489)
N6: (-45.826,3.707,30.878)
N7: (-42.767,3.376,31.006)
N9: (-41.571,3.342,29.097)
O5': (-38.953,4.893,31.159)
O3': (-38.429,6.185,27.334)
Image (generated by PyMOL):
PyMOL image
show in jmol