Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12433:12432
Extra
PDB:
ATOM 1 O3' A A2432 -10.891 -66.047 39.811 1.00 78.89 O
ATOM 2 P U A2433 -9.291 -66.212 39.882 1.00 61.94 P
ATOM 3 OP1 U A2433 -8.876 -65.733 41.224 1.00 61.39 O
ATOM 4 OP2 U A2433 -8.719 -65.549 38.664 1.00 61.85 O
ATOM 5 O5' U A2433 -9.083 -67.789 39.759 1.00 62.48 O
ATOM 6 C5' U A2433 -9.767 -68.690 40.615 1.00 62.78 C
ATOM 7 C4' U A2433 -10.426 -69.808 39.845 1.00 63.52 C
ATOM 8 O4' U A2433 -11.649 -69.320 39.234 1.00 63.78 O
ATOM 9 C3' U A2433 -9.651 -70.388 38.670 1.00 63.82 C
ATOM 10 O3' U A2433 -8.642 -71.316 39.042 1.00 63.85 O
ATOM 11 C2' U A2433 -10.769 -71.013 37.854 1.00 64.52 C
ATOM 12 O2' U A2433 -11.209 -72.220 38.462 1.00 64.95 O
ATOM 13 C1' U A2433 -11.862 -69.971 38.011 1.00 64.35 C
ATOM 14 N1 U A2433 -11.794 -68.985 36.953 1.00 64.22 N
ATOM 15 C2 U A2433 -12.422 -69.321 35.783 1.00 64.79 C
ATOM 16 O2 U A2433 -13.035 -70.370 35.648 1.00 65.37 O
ATOM 17 N3 U A2433 -12.331 -68.396 34.777 1.00 64.68 N
ATOM 18 C4 U A2433 -11.676 -67.189 34.847 1.00 64.06 C
ATOM 19 O4 U A2433 -11.672 -66.450 33.863 1.00 64.05 O
ATOM 20 C5 U A2433 -11.033 -66.935 36.091 1.00 63.50 C
ATOM 21 C6 U A2433 -11.106 -67.829 37.070 1.00 63.60 C
ATOM 22 P C A2434 -7.561 -71.815 37.948 1.00 62.55 P
ATOM 23 OP1 C A2434 -6.718 -72.855 38.595 1.00 62.62 O
ATOM 24 OP2 C A2434 -6.910 -70.613 37.415 1.00 62.07 O
ATOM 25 O5' C A2434 -8.451 -72.471 36.817 1.00 63.28 O
TER
ATOM 1 O3' A B2431 -10.803 -60.934 35.996 1.00 78.08 O
ATOM 2 P A B2432 -11.391 -62.413 36.004 1.00 78.67 P
ATOM 3 OP1 A B2432 -10.240 -63.336 35.858 1.00 78.73 O
ATOM 4 OP2 A B2432 -12.473 -62.458 34.979 1.00 79.21 O
ATOM 5 O5' A B2432 -12.018 -62.546 37.474 1.00 78.52 O
ATOM 6 C5' A B2432 -11.193 -62.553 38.634 1.00 78.05 C
ATOM 7 C4' A B2432 -11.497 -63.717 39.562 1.00 78.30 C
ATOM 8 O4' A B2432 -12.824 -63.564 40.158 1.00 78.45 O
ATOM 9 C3' A B2432 -11.476 -65.102 38.914 1.00 78.91 C
ATOM 10 O3' A B2432 -10.891 -66.047 39.811 1.00 78.89 O
ATOM 11 C2' A B2432 -12.961 -65.416 38.743 1.00 79.43 C
ATOM 12 O2' A B2432 -13.281 -66.791 38.652 1.00 80.01 O
ATOM 13 C1' A B2432 -13.543 -64.775 39.991 1.00 79.08 C
ATOM 14 N9 A B2432 -14.970 -64.484 39.875 1.00 79.37 N
ATOM 15 C8 A B2432 -15.650 -64.088 38.756 1.00 79.67 C
ATOM 16 N7 A B2432 -16.938 -63.962 38.948 1.00 79.93 N
ATOM 17 C5 A B2432 -17.126 -64.308 40.270 1.00 79.80 C
ATOM 18 C6 A B2432 -18.273 -64.374 41.089 1.00 79.95 C
ATOM 19 N6 A B2432 -19.496 -64.073 40.693 1.00 80.28 N
ATOM 20 N1 A B2432 -18.112 -64.762 42.361 1.00 79.77 N
ATOM 21 C2 A B2432 -16.860 -65.034 42.753 1.00 79.44 C
ATOM 22 N3 A B2432 -15.706 -65.038 42.106 1.00 79.27 N
ATOM 23 C4 A B2432 -15.914 -64.650 40.844 1.00 79.46 C
ATOM 24 P U B2433 -9.291 -66.212 39.882 1.00 61.94 P
ATOM 25 OP1 U B2433 -8.876 -65.733 41.224 1.00 61.39 O
ATOM 26 OP2 U B2433 -8.719 -65.549 38.664 1.00 61.85 O
ATOM 27 O5' U B2433 -9.083 -67.789 39.759 1.00 62.48 O
TER
ATOM 2 P U A2433 -9.291 -66.212 39.882 1.00 61.94 P
ATOM 3 OP1 U A2433 -8.876 -65.733 41.224 1.00 61.39 O
ATOM 4 OP2 U A2433 -8.719 -65.549 38.664 1.00 61.85 O
ATOM 5 O5' U A2433 -9.083 -67.789 39.759 1.00 62.48 O
ATOM 6 C5' U A2433 -9.767 -68.690 40.615 1.00 62.78 C
ATOM 7 C4' U A2433 -10.426 -69.808 39.845 1.00 63.52 C
ATOM 8 O4' U A2433 -11.649 -69.320 39.234 1.00 63.78 O
ATOM 9 C3' U A2433 -9.651 -70.388 38.670 1.00 63.82 C
ATOM 10 O3' U A2433 -8.642 -71.316 39.042 1.00 63.85 O
ATOM 11 C2' U A2433 -10.769 -71.013 37.854 1.00 64.52 C
ATOM 12 O2' U A2433 -11.209 -72.220 38.462 1.00 64.95 O
ATOM 13 C1' U A2433 -11.862 -69.971 38.011 1.00 64.35 C
ATOM 14 N1 U A2433 -11.794 -68.985 36.953 1.00 64.22 N
ATOM 15 C2 U A2433 -12.422 -69.321 35.783 1.00 64.79 C
ATOM 16 O2 U A2433 -13.035 -70.370 35.648 1.00 65.37 O
ATOM 17 N3 U A2433 -12.331 -68.396 34.777 1.00 64.68 N
ATOM 18 C4 U A2433 -11.676 -67.189 34.847 1.00 64.06 C
ATOM 19 O4 U A2433 -11.672 -66.450 33.863 1.00 64.05 O
ATOM 20 C5 U A2433 -11.033 -66.935 36.091 1.00 63.50 C
ATOM 21 C6 U A2433 -11.106 -67.829 37.070 1.00 63.60 C
ATOM 22 P C A2434 -7.561 -71.815 37.948 1.00 62.55 P
ATOM 23 OP1 C A2434 -6.718 -72.855 38.595 1.00 62.62 O
ATOM 24 OP2 C A2434 -6.910 -70.613 37.415 1.00 62.07 O
ATOM 25 O5' C A2434 -8.451 -72.471 36.817 1.00 63.28 O
TER
ATOM 1 O3' A B2431 -10.803 -60.934 35.996 1.00 78.08 O
ATOM 2 P A B2432 -11.391 -62.413 36.004 1.00 78.67 P
ATOM 3 OP1 A B2432 -10.240 -63.336 35.858 1.00 78.73 O
ATOM 4 OP2 A B2432 -12.473 -62.458 34.979 1.00 79.21 O
ATOM 5 O5' A B2432 -12.018 -62.546 37.474 1.00 78.52 O
ATOM 6 C5' A B2432 -11.193 -62.553 38.634 1.00 78.05 C
ATOM 7 C4' A B2432 -11.497 -63.717 39.562 1.00 78.30 C
ATOM 8 O4' A B2432 -12.824 -63.564 40.158 1.00 78.45 O
ATOM 9 C3' A B2432 -11.476 -65.102 38.914 1.00 78.91 C
ATOM 10 O3' A B2432 -10.891 -66.047 39.811 1.00 78.89 O
ATOM 11 C2' A B2432 -12.961 -65.416 38.743 1.00 79.43 C
ATOM 12 O2' A B2432 -13.281 -66.791 38.652 1.00 80.01 O
ATOM 13 C1' A B2432 -13.543 -64.775 39.991 1.00 79.08 C
ATOM 14 N9 A B2432 -14.970 -64.484 39.875 1.00 79.37 N
ATOM 15 C8 A B2432 -15.650 -64.088 38.756 1.00 79.67 C
ATOM 16 N7 A B2432 -16.938 -63.962 38.948 1.00 79.93 N
ATOM 17 C5 A B2432 -17.126 -64.308 40.270 1.00 79.80 C
ATOM 18 C6 A B2432 -18.273 -64.374 41.089 1.00 79.95 C
ATOM 19 N6 A B2432 -19.496 -64.073 40.693 1.00 80.28 N
ATOM 20 N1 A B2432 -18.112 -64.762 42.361 1.00 79.77 N
ATOM 21 C2 A B2432 -16.860 -65.034 42.753 1.00 79.44 C
ATOM 22 N3 A B2432 -15.706 -65.038 42.106 1.00 79.27 N
ATOM 23 C4 A B2432 -15.914 -64.650 40.844 1.00 79.46 C
ATOM 24 P U B2433 -9.291 -66.212 39.882 1.00 61.94 P
ATOM 25 OP1 U B2433 -8.876 -65.733 41.224 1.00 61.39 O
ATOM 26 OP2 U B2433 -8.719 -65.549 38.664 1.00 61.85 O
ATOM 27 O5' U B2433 -9.083 -67.789 39.759 1.00 62.48 O
TER
Atoms:
C4: (-11.676,-67.189,34.847)
N3: (-12.331,-68.396,34.777)
OP1: (-8.876,-65.733,41.224)
OP2: (-8.719,-65.549,38.664)
C2: (-12.422,-69.321,35.783)
C1': (-11.862,-69.971,38.011)
C3': (-9.651,-70.388,38.670)
O5': (-9.083,-67.789,39.759)
O4': (-11.649,-69.320,39.234)
C5': (-9.767,-68.690,40.615)
P: (-9.291,-66.212,39.882)
C4': (-10.426,-69.808,39.845)
C2': (-10.769,-71.013,37.854)
O2': (-11.209,-72.220,38.462)
N1: (-11.794,-68.985,36.953)
O4: (-11.672,-66.450,33.863)
O2: (-13.035,-70.370,35.648)
C6: (-11.106,-67.829,37.070)
C5: (-11.033,-66.935,36.091)
O3': (-8.642,-71.316,39.042)
N3: (-12.331,-68.396,34.777)
OP1: (-8.876,-65.733,41.224)
OP2: (-8.719,-65.549,38.664)
C2: (-12.422,-69.321,35.783)
C1': (-11.862,-69.971,38.011)
C3': (-9.651,-70.388,38.670)
O5': (-9.083,-67.789,39.759)
O4': (-11.649,-69.320,39.234)
C5': (-9.767,-68.690,40.615)
P: (-9.291,-66.212,39.882)
C4': (-10.426,-69.808,39.845)
C2': (-10.769,-71.013,37.854)
O2': (-11.209,-72.220,38.462)
N1: (-11.794,-68.985,36.953)
O4: (-11.672,-66.450,33.863)
O2: (-13.035,-70.370,35.648)
C6: (-11.106,-67.829,37.070)
C5: (-11.033,-66.935,36.091)
O3': (-8.642,-71.316,39.042)
OP1: (-10.240,-63.336,35.858)
OP2: (-12.473,-62.458,34.979)
C3': (-11.476,-65.102,38.914)
C1': (-13.543,-64.775,39.991)
C5': (-11.193,-62.553,38.634)
O4': (-12.824,-63.564,40.158)
C8: (-15.650,-64.088,38.756)
O2': (-13.281,-66.791,38.652)
C6: (-18.273,-64.374,41.089)
C5: (-17.126,-64.308,40.270)
C4: (-15.914,-64.650,40.844)
P: (-11.391,-62.413,36.004)
C4': (-11.497,-63.717,39.562)
C2': (-12.961,-65.416,38.743)
C2: (-16.860,-65.034,42.753)
N1: (-18.112,-64.762,42.361)
N3: (-15.706,-65.038,42.106)
N6: (-19.496,-64.073,40.693)
N7: (-16.938,-63.962,38.948)
N9: (-14.970,-64.484,39.875)
O5': (-12.018,-62.546,37.474)
O3': (-10.891,-66.047,39.811)
OP2: (-12.473,-62.458,34.979)
C3': (-11.476,-65.102,38.914)
C1': (-13.543,-64.775,39.991)
C5': (-11.193,-62.553,38.634)
O4': (-12.824,-63.564,40.158)
C8: (-15.650,-64.088,38.756)
O2': (-13.281,-66.791,38.652)
C6: (-18.273,-64.374,41.089)
C5: (-17.126,-64.308,40.270)
C4: (-15.914,-64.650,40.844)
P: (-11.391,-62.413,36.004)
C4': (-11.497,-63.717,39.562)
C2': (-12.961,-65.416,38.743)
C2: (-16.860,-65.034,42.753)
N1: (-18.112,-64.762,42.361)
N3: (-15.706,-65.038,42.106)
N6: (-19.496,-64.073,40.693)
N7: (-16.938,-63.962,38.948)
N9: (-14.970,-64.484,39.875)
O5': (-12.018,-62.546,37.474)
O3': (-10.891,-66.047,39.811)
Image (generated by PyMOL):