Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0505:0504
Extra
PDB:
ATOM 1 O3' A A 504 23.317 146.393 61.370 1.00 48.49 O
ATOM 2 P U A 505 23.256 146.182 62.958 1.00 48.56 P
ATOM 3 OP1 U A 505 21.990 146.770 63.457 1.00 48.19 O
ATOM 4 OP2 U A 505 24.546 146.633 63.535 1.00 50.66 O
ATOM 5 O5' U A 505 23.140 144.606 63.124 1.00 46.35 O
ATOM 6 C5' U A 505 21.913 143.929 62.828 1.00 45.46 C
ATOM 7 C4' U A 505 22.114 142.441 62.924 1.00 45.90 C
ATOM 8 O4' U A 505 23.211 142.064 62.061 1.00 43.59 O
ATOM 9 C3' U A 505 22.500 141.930 64.300 1.00 44.21 C
ATOM 10 O3' U A 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 11 C2' U A 505 23.247 140.648 63.972 1.00 43.75 C
ATOM 12 O2' U A 505 22.345 139.598 63.716 1.00 41.69 O
ATOM 13 C1' U A 505 23.943 141.018 62.659 1.00 45.54 C
ATOM 14 N1 U A 505 25.350 141.437 62.754 1.00 48.00 N
ATOM 15 C2 U A 505 26.321 140.457 62.899 1.00 48.19 C
ATOM 16 O2 U A 505 26.062 139.273 62.992 1.00 49.10 O
ATOM 17 N3 U A 505 27.611 140.920 62.931 1.00 49.68 N
ATOM 18 C4 U A 505 28.026 142.233 62.837 1.00 50.63 C
ATOM 19 O4 U A 505 29.231 142.488 62.782 1.00 52.06 O
ATOM 20 C5 U A 505 26.968 143.181 62.713 1.00 51.40 C
ATOM 21 C6 U A 505 25.699 142.763 62.678 1.00 50.22 C
ATOM 22 P G A 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 23 OP1 G A 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 24 OP2 G A 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 25 O5' G A 506 22.310 141.986 67.329 1.00 47.99 O
TER
ATOM 1 O3' C B 503 27.416 149.149 61.460 1.00 58.58 O
ATOM 2 P A B 504 27.831 147.626 61.140 1.00 58.77 P
ATOM 3 OP1 A B 504 27.407 146.824 62.314 1.00 58.66 O
ATOM 4 OP2 A B 504 29.232 147.554 60.667 1.00 58.94 O
ATOM 5 O5' A B 504 26.953 147.211 59.884 1.00 55.89 O
ATOM 6 C5' A B 504 25.650 147.757 59.678 1.00 52.72 C
ATOM 7 C4' A B 504 24.673 146.649 59.418 1.00 51.38 C
ATOM 8 O4' A B 504 25.252 145.730 58.457 1.00 51.32 O
ATOM 9 C3' A B 504 24.346 145.775 60.610 1.00 49.72 C
ATOM 10 O3' A B 504 23.317 146.393 61.370 1.00 48.49 O
ATOM 11 C2' A B 504 23.872 144.496 59.934 1.00 52.35 C
ATOM 12 O2' A B 504 22.570 144.616 59.396 1.00 55.76 O
ATOM 13 C1' A B 504 24.829 144.413 58.745 1.00 52.06 C
ATOM 14 N9 A B 504 26.012 143.592 58.984 1.00 53.68 N
ATOM 15 C8 A B 504 27.325 143.987 58.991 1.00 54.87 C
ATOM 16 N7 A B 504 28.169 143.009 59.205 1.00 55.89 N
ATOM 17 C5 A B 504 27.356 141.897 59.357 1.00 55.34 C
ATOM 18 C6 A B 504 27.643 140.550 59.610 1.00 56.92 C
ATOM 19 N6 A B 504 28.880 140.073 59.761 1.00 58.60 N
ATOM 20 N1 A B 504 26.606 139.695 59.707 1.00 57.03 N
ATOM 21 C2 A B 504 25.367 140.178 59.560 1.00 56.56 C
ATOM 22 N3 A B 504 24.970 141.424 59.323 1.00 54.59 N
ATOM 23 C4 A B 504 26.026 142.243 59.231 1.00 54.21 C
ATOM 24 P U B 505 23.256 146.182 62.958 1.00 48.56 P
ATOM 25 OP1 U B 505 21.990 146.770 63.457 1.00 48.19 O
ATOM 26 OP2 U B 505 24.546 146.633 63.535 1.00 50.66 O
ATOM 27 O5' U B 505 23.140 144.606 63.124 1.00 46.35 O
TER
ATOM 2 P U A 505 23.256 146.182 62.958 1.00 48.56 P
ATOM 3 OP1 U A 505 21.990 146.770 63.457 1.00 48.19 O
ATOM 4 OP2 U A 505 24.546 146.633 63.535 1.00 50.66 O
ATOM 5 O5' U A 505 23.140 144.606 63.124 1.00 46.35 O
ATOM 6 C5' U A 505 21.913 143.929 62.828 1.00 45.46 C
ATOM 7 C4' U A 505 22.114 142.441 62.924 1.00 45.90 C
ATOM 8 O4' U A 505 23.211 142.064 62.061 1.00 43.59 O
ATOM 9 C3' U A 505 22.500 141.930 64.300 1.00 44.21 C
ATOM 10 O3' U A 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 11 C2' U A 505 23.247 140.648 63.972 1.00 43.75 C
ATOM 12 O2' U A 505 22.345 139.598 63.716 1.00 41.69 O
ATOM 13 C1' U A 505 23.943 141.018 62.659 1.00 45.54 C
ATOM 14 N1 U A 505 25.350 141.437 62.754 1.00 48.00 N
ATOM 15 C2 U A 505 26.321 140.457 62.899 1.00 48.19 C
ATOM 16 O2 U A 505 26.062 139.273 62.992 1.00 49.10 O
ATOM 17 N3 U A 505 27.611 140.920 62.931 1.00 49.68 N
ATOM 18 C4 U A 505 28.026 142.233 62.837 1.00 50.63 C
ATOM 19 O4 U A 505 29.231 142.488 62.782 1.00 52.06 O
ATOM 20 C5 U A 505 26.968 143.181 62.713 1.00 51.40 C
ATOM 21 C6 U A 505 25.699 142.763 62.678 1.00 50.22 C
ATOM 22 P G A 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 23 OP1 G A 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 24 OP2 G A 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 25 O5' G A 506 22.310 141.986 67.329 1.00 47.99 O
TER
ATOM 1 O3' C B 503 27.416 149.149 61.460 1.00 58.58 O
ATOM 2 P A B 504 27.831 147.626 61.140 1.00 58.77 P
ATOM 3 OP1 A B 504 27.407 146.824 62.314 1.00 58.66 O
ATOM 4 OP2 A B 504 29.232 147.554 60.667 1.00 58.94 O
ATOM 5 O5' A B 504 26.953 147.211 59.884 1.00 55.89 O
ATOM 6 C5' A B 504 25.650 147.757 59.678 1.00 52.72 C
ATOM 7 C4' A B 504 24.673 146.649 59.418 1.00 51.38 C
ATOM 8 O4' A B 504 25.252 145.730 58.457 1.00 51.32 O
ATOM 9 C3' A B 504 24.346 145.775 60.610 1.00 49.72 C
ATOM 10 O3' A B 504 23.317 146.393 61.370 1.00 48.49 O
ATOM 11 C2' A B 504 23.872 144.496 59.934 1.00 52.35 C
ATOM 12 O2' A B 504 22.570 144.616 59.396 1.00 55.76 O
ATOM 13 C1' A B 504 24.829 144.413 58.745 1.00 52.06 C
ATOM 14 N9 A B 504 26.012 143.592 58.984 1.00 53.68 N
ATOM 15 C8 A B 504 27.325 143.987 58.991 1.00 54.87 C
ATOM 16 N7 A B 504 28.169 143.009 59.205 1.00 55.89 N
ATOM 17 C5 A B 504 27.356 141.897 59.357 1.00 55.34 C
ATOM 18 C6 A B 504 27.643 140.550 59.610 1.00 56.92 C
ATOM 19 N6 A B 504 28.880 140.073 59.761 1.00 58.60 N
ATOM 20 N1 A B 504 26.606 139.695 59.707 1.00 57.03 N
ATOM 21 C2 A B 504 25.367 140.178 59.560 1.00 56.56 C
ATOM 22 N3 A B 504 24.970 141.424 59.323 1.00 54.59 N
ATOM 23 C4 A B 504 26.026 142.243 59.231 1.00 54.21 C
ATOM 24 P U B 505 23.256 146.182 62.958 1.00 48.56 P
ATOM 25 OP1 U B 505 21.990 146.770 63.457 1.00 48.19 O
ATOM 26 OP2 U B 505 24.546 146.633 63.535 1.00 50.66 O
ATOM 27 O5' U B 505 23.140 144.606 63.124 1.00 46.35 O
TER
Atoms:
C4: (28.026,142.233,62.837)
N3: (27.611,140.920,62.931)
OP1: (21.990,146.770,63.457)
OP2: (24.546,146.633,63.535)
C2: (26.321,140.457,62.899)
C1': (23.943,141.018,62.659)
C3': (22.500,141.930,64.300)
O5': (23.140,144.606,63.124)
O4': (23.211,142.064,62.061)
C5': (21.913,143.929,62.828)
P: (23.256,146.182,62.958)
C4': (22.114,142.441,62.924)
C2': (23.247,140.648,63.972)
O2': (22.345,139.598,63.716)
N1: (25.350,141.437,62.754)
O4: (29.231,142.488,62.782)
O2: (26.062,139.273,62.992)
C6: (25.699,142.763,62.678)
C5: (26.968,143.181,62.713)
O3': (21.316,141.620,65.027)
N3: (27.611,140.920,62.931)
OP1: (21.990,146.770,63.457)
OP2: (24.546,146.633,63.535)
C2: (26.321,140.457,62.899)
C1': (23.943,141.018,62.659)
C3': (22.500,141.930,64.300)
O5': (23.140,144.606,63.124)
O4': (23.211,142.064,62.061)
C5': (21.913,143.929,62.828)
P: (23.256,146.182,62.958)
C4': (22.114,142.441,62.924)
C2': (23.247,140.648,63.972)
O2': (22.345,139.598,63.716)
N1: (25.350,141.437,62.754)
O4: (29.231,142.488,62.782)
O2: (26.062,139.273,62.992)
C6: (25.699,142.763,62.678)
C5: (26.968,143.181,62.713)
O3': (21.316,141.620,65.027)
OP1: (27.407,146.824,62.314)
OP2: (29.232,147.554,60.667)
C3': (24.346,145.775,60.610)
C1': (24.829,144.413,58.745)
C5': (25.650,147.757,59.678)
O4': (25.252,145.730,58.457)
C8: (27.325,143.987,58.991)
O2': (22.570,144.616,59.396)
C6: (27.643,140.550,59.610)
C5: (27.356,141.897,59.357)
C4: (26.026,142.243,59.231)
P: (27.831,147.626,61.140)
C4': (24.673,146.649,59.418)
C2': (23.872,144.496,59.934)
C2: (25.367,140.178,59.560)
N1: (26.606,139.695,59.707)
N3: (24.970,141.424,59.323)
N6: (28.880,140.073,59.761)
N7: (28.169,143.009,59.205)
N9: (26.012,143.592,58.984)
O5': (26.953,147.211,59.884)
O3': (23.317,146.393,61.370)
OP2: (29.232,147.554,60.667)
C3': (24.346,145.775,60.610)
C1': (24.829,144.413,58.745)
C5': (25.650,147.757,59.678)
O4': (25.252,145.730,58.457)
C8: (27.325,143.987,58.991)
O2': (22.570,144.616,59.396)
C6: (27.643,140.550,59.610)
C5: (27.356,141.897,59.357)
C4: (26.026,142.243,59.231)
P: (27.831,147.626,61.140)
C4': (24.673,146.649,59.418)
C2': (23.872,144.496,59.934)
C2: (25.367,140.178,59.560)
N1: (26.606,139.695,59.707)
N3: (24.970,141.424,59.323)
N6: (28.880,140.073,59.761)
N7: (28.169,143.009,59.205)
N9: (26.012,143.592,58.984)
O5': (26.953,147.211,59.884)
O3': (23.317,146.393,61.370)
Image (generated by PyMOL):