Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1221:A1928
Extra
PDB:
ATOM 1 O3' A A1220 58.755 -84.758 -1.743 1.00 40.11 O
ATOM 2 P G A1221 58.811 -85.550 -0.336 1.00 38.74 P
ATOM 3 OP1 G A1221 59.175 -84.603 0.767 1.00 27.19 O
ATOM 4 OP2 G A1221 59.633 -86.761 -0.578 1.00 34.19 O
ATOM 5 O5' G A1221 57.312 -86.070 -0.136 1.00 38.71 O
ATOM 6 C5' G A1221 56.405 -85.435 0.770 1.00 37.52 C
ATOM 7 C4' G A1221 55.583 -84.388 0.049 1.00 40.15 C
ATOM 8 O4' G A1221 55.142 -84.926 -1.228 1.00 42.73 O
ATOM 9 C3' G A1221 54.319 -83.921 0.780 1.00 42.30 C
ATOM 10 O3' G A1221 54.108 -82.504 0.531 1.00 39.90 O
ATOM 11 C2' G A1221 53.238 -84.777 0.103 1.00 39.41 C
ATOM 12 O2' G A1221 51.930 -84.267 0.208 1.00 49.47 O
ATOM 13 C1' G A1221 53.750 -84.741 -1.331 1.00 39.44 C
ATOM 14 N9 G A1221 53.212 -85.614 -2.363 1.00 35.81 N
ATOM 15 C8 G A1221 52.932 -86.951 -2.301 1.00 37.89 C
ATOM 16 N7 G A1221 52.545 -87.445 -3.447 1.00 36.69 N
ATOM 17 C5 G A1221 52.549 -86.355 -4.305 1.00 40.79 C
ATOM 18 C6 G A1221 52.230 -86.266 -5.682 1.00 46.50 C
ATOM 19 O6 G A1221 51.878 -87.169 -6.449 1.00 50.16 O
ATOM 20 N1 G A1221 52.366 -84.962 -6.153 1.00 31.99 N
ATOM 21 C2 G A1221 52.761 -83.886 -5.391 1.00 36.64 C
ATOM 22 N2 G A1221 52.839 -82.703 -6.018 1.00 47.34 N
ATOM 23 N3 G A1221 53.060 -83.961 -4.109 1.00 39.51 N
ATOM 24 C4 G A1221 52.938 -85.216 -3.639 1.00 39.52 C
ATOM 25 P U A1222 53.460 -81.546 1.658 1.00 32.06 P
ATOM 26 OP1 U A1222 53.452 -82.186 3.015 1.00 34.44 O
ATOM 27 OP2 U A1222 52.201 -80.986 1.104 1.00 33.04 O
ATOM 28 O5' U A1222 54.515 -80.374 1.822 1.00 37.74 O
TER
ATOM 1 O3' G B1927 51.257 -79.976 -9.387 1.00 39.02 O
ATOM 2 P A B1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 3 OP1 A B1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 4 OP2 A B1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 5 O5' A B1928 53.570 -79.241 -9.022 1.00 32.22 O
ATOM 6 C5' A B1928 54.685 -78.693 -9.719 1.00 36.89 C
ATOM 7 C4' A B1928 54.505 -77.196 -9.934 1.00 35.55 C
ATOM 8 O4' A B1928 53.948 -76.581 -8.755 1.00 35.42 O
ATOM 9 C3' A B1928 55.817 -76.478 -10.154 1.00 34.44 C
ATOM 10 O3' A B1928 56.189 -76.514 -11.504 1.00 30.15 O
ATOM 11 C2' A B1928 55.578 -75.077 -9.617 1.00 35.03 C
ATOM 12 O2' A B1928 55.013 -74.160 -10.526 1.00 37.66 O
ATOM 13 C1' A B1928 54.610 -75.362 -8.480 1.00 32.40 C
ATOM 14 N9 A B1928 55.314 -75.524 -7.218 1.00 34.61 N
ATOM 15 C8 A B1928 55.413 -76.659 -6.447 1.00 36.41 C
ATOM 16 N7 A B1928 56.080 -76.484 -5.338 1.00 38.66 N
ATOM 17 C5 A B1928 56.458 -75.151 -5.380 1.00 36.45 C
ATOM 18 C6 A B1928 57.175 -74.343 -4.485 1.00 34.25 C
ATOM 19 N6 A B1928 57.673 -74.794 -3.326 1.00 32.02 N
ATOM 20 N1 A B1928 57.366 -73.040 -4.825 1.00 34.59 N
ATOM 21 C2 A B1928 56.868 -72.603 -5.999 1.00 35.59 C
ATOM 22 N3 A B1928 56.180 -73.272 -6.928 1.00 31.77 N
ATOM 23 C4 A B1928 56.004 -74.552 -6.547 1.00 35.62 C
ATOM 24 P A B1929 57.675 -76.938 -11.872 1.00 37.49 P
ATOM 25 OP1 A B1929 57.718 -77.062 -13.348 1.00 44.51 O
ATOM 26 OP2 A B1929 58.058 -78.096 -11.013 1.00 38.69 O
ATOM 27 O5' A B1929 58.518 -75.665 -11.428 1.00 36.59 O
TER
ATOM 2 P G A1221 58.811 -85.550 -0.336 1.00 38.74 P
ATOM 3 OP1 G A1221 59.175 -84.603 0.767 1.00 27.19 O
ATOM 4 OP2 G A1221 59.633 -86.761 -0.578 1.00 34.19 O
ATOM 5 O5' G A1221 57.312 -86.070 -0.136 1.00 38.71 O
ATOM 6 C5' G A1221 56.405 -85.435 0.770 1.00 37.52 C
ATOM 7 C4' G A1221 55.583 -84.388 0.049 1.00 40.15 C
ATOM 8 O4' G A1221 55.142 -84.926 -1.228 1.00 42.73 O
ATOM 9 C3' G A1221 54.319 -83.921 0.780 1.00 42.30 C
ATOM 10 O3' G A1221 54.108 -82.504 0.531 1.00 39.90 O
ATOM 11 C2' G A1221 53.238 -84.777 0.103 1.00 39.41 C
ATOM 12 O2' G A1221 51.930 -84.267 0.208 1.00 49.47 O
ATOM 13 C1' G A1221 53.750 -84.741 -1.331 1.00 39.44 C
ATOM 14 N9 G A1221 53.212 -85.614 -2.363 1.00 35.81 N
ATOM 15 C8 G A1221 52.932 -86.951 -2.301 1.00 37.89 C
ATOM 16 N7 G A1221 52.545 -87.445 -3.447 1.00 36.69 N
ATOM 17 C5 G A1221 52.549 -86.355 -4.305 1.00 40.79 C
ATOM 18 C6 G A1221 52.230 -86.266 -5.682 1.00 46.50 C
ATOM 19 O6 G A1221 51.878 -87.169 -6.449 1.00 50.16 O
ATOM 20 N1 G A1221 52.366 -84.962 -6.153 1.00 31.99 N
ATOM 21 C2 G A1221 52.761 -83.886 -5.391 1.00 36.64 C
ATOM 22 N2 G A1221 52.839 -82.703 -6.018 1.00 47.34 N
ATOM 23 N3 G A1221 53.060 -83.961 -4.109 1.00 39.51 N
ATOM 24 C4 G A1221 52.938 -85.216 -3.639 1.00 39.52 C
ATOM 25 P U A1222 53.460 -81.546 1.658 1.00 32.06 P
ATOM 26 OP1 U A1222 53.452 -82.186 3.015 1.00 34.44 O
ATOM 27 OP2 U A1222 52.201 -80.986 1.104 1.00 33.04 O
ATOM 28 O5' U A1222 54.515 -80.374 1.822 1.00 37.74 O
TER
ATOM 1 O3' G B1927 51.257 -79.976 -9.387 1.00 39.02 O
ATOM 2 P A B1928 52.752 -80.483 -9.594 1.00 37.94 P
ATOM 3 OP1 A B1928 52.948 -80.632 -11.055 1.00 32.16 O
ATOM 4 OP2 A B1928 52.988 -81.646 -8.709 1.00 37.53 O
ATOM 5 O5' A B1928 53.570 -79.241 -9.022 1.00 32.22 O
ATOM 6 C5' A B1928 54.685 -78.693 -9.719 1.00 36.89 C
ATOM 7 C4' A B1928 54.505 -77.196 -9.934 1.00 35.55 C
ATOM 8 O4' A B1928 53.948 -76.581 -8.755 1.00 35.42 O
ATOM 9 C3' A B1928 55.817 -76.478 -10.154 1.00 34.44 C
ATOM 10 O3' A B1928 56.189 -76.514 -11.504 1.00 30.15 O
ATOM 11 C2' A B1928 55.578 -75.077 -9.617 1.00 35.03 C
ATOM 12 O2' A B1928 55.013 -74.160 -10.526 1.00 37.66 O
ATOM 13 C1' A B1928 54.610 -75.362 -8.480 1.00 32.40 C
ATOM 14 N9 A B1928 55.314 -75.524 -7.218 1.00 34.61 N
ATOM 15 C8 A B1928 55.413 -76.659 -6.447 1.00 36.41 C
ATOM 16 N7 A B1928 56.080 -76.484 -5.338 1.00 38.66 N
ATOM 17 C5 A B1928 56.458 -75.151 -5.380 1.00 36.45 C
ATOM 18 C6 A B1928 57.175 -74.343 -4.485 1.00 34.25 C
ATOM 19 N6 A B1928 57.673 -74.794 -3.326 1.00 32.02 N
ATOM 20 N1 A B1928 57.366 -73.040 -4.825 1.00 34.59 N
ATOM 21 C2 A B1928 56.868 -72.603 -5.999 1.00 35.59 C
ATOM 22 N3 A B1928 56.180 -73.272 -6.928 1.00 31.77 N
ATOM 23 C4 A B1928 56.004 -74.552 -6.547 1.00 35.62 C
ATOM 24 P A B1929 57.675 -76.938 -11.872 1.00 37.49 P
ATOM 25 OP1 A B1929 57.718 -77.062 -13.348 1.00 44.51 O
ATOM 26 OP2 A B1929 58.058 -78.096 -11.013 1.00 38.69 O
ATOM 27 O5' A B1929 58.518 -75.665 -11.428 1.00 36.59 O
TER
Atoms:
OP1: (59.175,-84.603,0.767)
OP2: (59.633,-86.761,-0.578)
C3': (54.319,-83.921,0.780)
C1': (53.750,-84.741,-1.331)
C5': (56.405,-85.435,0.770)
O6: (51.878,-87.169,-6.449)
O4': (55.142,-84.926,-1.228)
C8: (52.932,-86.951,-2.301)
C2: (52.761,-83.886,-5.391)
C6: (52.230,-86.266,-5.682)
C5: (52.549,-86.355,-4.305)
C4: (52.938,-85.216,-3.639)
P: (58.811,-85.550,-0.336)
C4': (55.583,-84.388,0.049)
C2': (53.238,-84.777,0.103)
O2': (51.930,-84.267,0.208)
N1: (52.366,-84.962,-6.153)
N2: (52.839,-82.703,-6.018)
N3: (53.060,-83.961,-4.109)
N7: (52.545,-87.445,-3.447)
N9: (53.212,-85.614,-2.363)
O5': (57.312,-86.070,-0.136)
O3': (54.108,-82.504,0.531)
OP2: (59.633,-86.761,-0.578)
C3': (54.319,-83.921,0.780)
C1': (53.750,-84.741,-1.331)
C5': (56.405,-85.435,0.770)
O6: (51.878,-87.169,-6.449)
O4': (55.142,-84.926,-1.228)
C8: (52.932,-86.951,-2.301)
C2: (52.761,-83.886,-5.391)
C6: (52.230,-86.266,-5.682)
C5: (52.549,-86.355,-4.305)
C4: (52.938,-85.216,-3.639)
P: (58.811,-85.550,-0.336)
C4': (55.583,-84.388,0.049)
C2': (53.238,-84.777,0.103)
O2': (51.930,-84.267,0.208)
N1: (52.366,-84.962,-6.153)
N2: (52.839,-82.703,-6.018)
N3: (53.060,-83.961,-4.109)
N7: (52.545,-87.445,-3.447)
N9: (53.212,-85.614,-2.363)
O5': (57.312,-86.070,-0.136)
O3': (54.108,-82.504,0.531)
OP1: (52.948,-80.632,-11.055)
OP2: (52.988,-81.646,-8.709)
C3': (55.817,-76.478,-10.154)
C1': (54.610,-75.362,-8.480)
C5': (54.685,-78.693,-9.719)
O4': (53.948,-76.581,-8.755)
C8: (55.413,-76.659,-6.447)
O2': (55.013,-74.160,-10.526)
C6: (57.175,-74.343,-4.485)
C5: (56.458,-75.151,-5.380)
C4: (56.004,-74.552,-6.547)
P: (52.752,-80.483,-9.594)
C4': (54.505,-77.196,-9.934)
C2': (55.578,-75.077,-9.617)
C2: (56.868,-72.603,-5.999)
N1: (57.366,-73.040,-4.825)
N3: (56.180,-73.272,-6.928)
N6: (57.673,-74.794,-3.326)
N7: (56.080,-76.484,-5.338)
N9: (55.314,-75.524,-7.218)
O5': (53.570,-79.241,-9.022)
O3': (56.189,-76.514,-11.504)
OP2: (52.988,-81.646,-8.709)
C3': (55.817,-76.478,-10.154)
C1': (54.610,-75.362,-8.480)
C5': (54.685,-78.693,-9.719)
O4': (53.948,-76.581,-8.755)
C8: (55.413,-76.659,-6.447)
O2': (55.013,-74.160,-10.526)
C6: (57.175,-74.343,-4.485)
C5: (56.458,-75.151,-5.380)
C4: (56.004,-74.552,-6.547)
P: (52.752,-80.483,-9.594)
C4': (54.505,-77.196,-9.934)
C2': (55.578,-75.077,-9.617)
C2: (56.868,-72.603,-5.999)
N1: (57.366,-73.040,-4.825)
N3: (56.180,-73.272,-6.928)
N6: (57.673,-74.794,-3.326)
N7: (56.080,-76.484,-5.338)
N9: (55.314,-75.524,-7.218)
O5': (53.570,-79.241,-9.022)
O3': (56.189,-76.514,-11.504)
Image (generated by PyMOL):