Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:B67:B12
Extra
PDB:
ATOM 1 O3' C A 66 61.289 43.631 121.510 1.00 55.08 O
ATOM 2 P G A 67 60.087 44.490 120.894 1.00 55.91 P
ATOM 3 OP1 G A 67 60.440 45.915 121.100 1.00 55.51 O
ATOM 4 OP2 G A 67 58.804 43.967 121.418 1.00 56.44 O
ATOM 5 O5' G A 67 60.163 44.152 119.344 1.00 54.98 O
ATOM 6 C5' G A 67 61.310 44.550 118.569 1.00 53.72 C
ATOM 7 C4' G A 67 61.129 44.149 117.135 1.00 51.79 C
ATOM 8 O4' G A 67 61.258 42.708 117.034 1.00 52.03 O
ATOM 9 C3' G A 67 59.757 44.431 116.540 1.00 50.18 C
ATOM 10 O3' G A 67 59.564 45.796 116.157 1.00 48.94 O
ATOM 11 C2' G A 67 59.735 43.447 115.380 1.00 50.14 C
ATOM 12 O2' G A 67 60.539 43.848 114.290 1.00 48.83 O
ATOM 13 C1' G A 67 60.367 42.222 116.042 1.00 50.50 C
ATOM 14 N9 G A 67 59.332 41.428 116.694 1.00 49.93 N
ATOM 15 C8 G A 67 59.091 41.289 118.042 1.00 50.58 C
ATOM 16 N7 G A 67 58.046 40.549 118.298 1.00 51.29 N
ATOM 17 C5 G A 67 57.573 40.177 117.045 1.00 49.94 C
ATOM 18 C6 G A 67 56.451 39.388 116.675 1.00 49.16 C
ATOM 19 O6 G A 67 55.596 38.869 117.401 1.00 49.85 O
ATOM 20 N1 G A 67 56.367 39.238 115.298 1.00 48.82 N
ATOM 21 C2 G A 67 57.230 39.785 114.390 1.00 48.00 C
ATOM 22 N2 G A 67 56.987 39.504 113.103 1.00 47.18 N
ATOM 23 N3 G A 67 58.257 40.542 114.715 1.00 48.11 N
ATOM 24 C4 G A 67 58.371 40.692 116.050 1.00 49.50 C
ATOM 25 P U A 68 58.084 46.438 116.189 1.00 48.51 P
ATOM 26 OP1 U A 68 58.176 47.848 115.755 1.00 50.05 O
ATOM 27 OP2 U A 68 57.438 46.117 117.489 1.00 49.16 O
ATOM 28 O5' U A 68 57.319 45.669 115.028 1.00 48.08 O
TER
ATOM 1 O3' C B 11 52.710 37.072 111.405 1.00 50.36 O
ATOM 2 P A B 12 54.182 36.626 111.831 1.00 51.65 P
ATOM 3 OP1 A B 12 54.126 35.610 112.905 1.00 52.20 O
ATOM 4 OP2 A B 12 54.950 37.877 112.058 1.00 52.88 O
ATOM 5 O5' A B 12 54.715 35.896 110.525 1.00 47.89 O
ATOM 6 C5' A B 12 54.601 34.480 110.401 1.00 46.92 C
ATOM 7 C4' A B 12 55.295 34.014 109.153 1.00 45.33 C
ATOM 8 O4' A B 12 54.506 34.386 107.994 1.00 45.10 O
ATOM 9 C3' A B 12 56.690 34.580 108.909 1.00 44.75 C
ATOM 10 O3' A B 12 57.434 33.597 108.204 1.00 43.78 O
ATOM 11 C2' A B 12 56.397 35.726 107.952 1.00 45.00 C
ATOM 12 O2' A B 12 57.465 36.124 107.123 1.00 46.24 O
ATOM 13 C1' A B 12 55.322 35.084 107.092 1.00 45.11 C
ATOM 14 N9 A B 12 54.514 36.043 106.355 1.00 45.35 N
ATOM 15 C8 A B 12 53.392 36.744 106.727 1.00 44.80 C
ATOM 16 N7 A B 12 52.932 37.533 105.789 1.00 42.80 N
ATOM 17 C5 A B 12 53.805 37.333 104.730 1.00 44.62 C
ATOM 18 C6 A B 12 53.862 37.870 103.438 1.00 45.16 C
ATOM 19 N6 A B 12 52.978 38.747 102.966 1.00 43.61 N
ATOM 20 N1 A B 12 54.872 37.467 102.631 1.00 45.90 N
ATOM 21 C2 A B 12 55.753 36.572 103.102 1.00 46.41 C
ATOM 22 N3 A B 12 55.798 35.986 104.294 1.00 45.57 N
ATOM 23 C4 A B 12 54.785 36.419 105.068 1.00 45.20 C
ATOM 24 P G B 13 58.799 33.026 108.817 1.00 44.90 P
ATOM 25 OP1 G B 13 59.129 31.839 107.988 1.00 44.05 O
ATOM 26 OP2 G B 13 58.623 32.876 110.278 1.00 44.17 O
ATOM 27 O5' G B 13 59.888 34.171 108.567 1.00 46.50 O
TER
ATOM 2 P G A 67 60.087 44.490 120.894 1.00 55.91 P
ATOM 3 OP1 G A 67 60.440 45.915 121.100 1.00 55.51 O
ATOM 4 OP2 G A 67 58.804 43.967 121.418 1.00 56.44 O
ATOM 5 O5' G A 67 60.163 44.152 119.344 1.00 54.98 O
ATOM 6 C5' G A 67 61.310 44.550 118.569 1.00 53.72 C
ATOM 7 C4' G A 67 61.129 44.149 117.135 1.00 51.79 C
ATOM 8 O4' G A 67 61.258 42.708 117.034 1.00 52.03 O
ATOM 9 C3' G A 67 59.757 44.431 116.540 1.00 50.18 C
ATOM 10 O3' G A 67 59.564 45.796 116.157 1.00 48.94 O
ATOM 11 C2' G A 67 59.735 43.447 115.380 1.00 50.14 C
ATOM 12 O2' G A 67 60.539 43.848 114.290 1.00 48.83 O
ATOM 13 C1' G A 67 60.367 42.222 116.042 1.00 50.50 C
ATOM 14 N9 G A 67 59.332 41.428 116.694 1.00 49.93 N
ATOM 15 C8 G A 67 59.091 41.289 118.042 1.00 50.58 C
ATOM 16 N7 G A 67 58.046 40.549 118.298 1.00 51.29 N
ATOM 17 C5 G A 67 57.573 40.177 117.045 1.00 49.94 C
ATOM 18 C6 G A 67 56.451 39.388 116.675 1.00 49.16 C
ATOM 19 O6 G A 67 55.596 38.869 117.401 1.00 49.85 O
ATOM 20 N1 G A 67 56.367 39.238 115.298 1.00 48.82 N
ATOM 21 C2 G A 67 57.230 39.785 114.390 1.00 48.00 C
ATOM 22 N2 G A 67 56.987 39.504 113.103 1.00 47.18 N
ATOM 23 N3 G A 67 58.257 40.542 114.715 1.00 48.11 N
ATOM 24 C4 G A 67 58.371 40.692 116.050 1.00 49.50 C
ATOM 25 P U A 68 58.084 46.438 116.189 1.00 48.51 P
ATOM 26 OP1 U A 68 58.176 47.848 115.755 1.00 50.05 O
ATOM 27 OP2 U A 68 57.438 46.117 117.489 1.00 49.16 O
ATOM 28 O5' U A 68 57.319 45.669 115.028 1.00 48.08 O
TER
ATOM 1 O3' C B 11 52.710 37.072 111.405 1.00 50.36 O
ATOM 2 P A B 12 54.182 36.626 111.831 1.00 51.65 P
ATOM 3 OP1 A B 12 54.126 35.610 112.905 1.00 52.20 O
ATOM 4 OP2 A B 12 54.950 37.877 112.058 1.00 52.88 O
ATOM 5 O5' A B 12 54.715 35.896 110.525 1.00 47.89 O
ATOM 6 C5' A B 12 54.601 34.480 110.401 1.00 46.92 C
ATOM 7 C4' A B 12 55.295 34.014 109.153 1.00 45.33 C
ATOM 8 O4' A B 12 54.506 34.386 107.994 1.00 45.10 O
ATOM 9 C3' A B 12 56.690 34.580 108.909 1.00 44.75 C
ATOM 10 O3' A B 12 57.434 33.597 108.204 1.00 43.78 O
ATOM 11 C2' A B 12 56.397 35.726 107.952 1.00 45.00 C
ATOM 12 O2' A B 12 57.465 36.124 107.123 1.00 46.24 O
ATOM 13 C1' A B 12 55.322 35.084 107.092 1.00 45.11 C
ATOM 14 N9 A B 12 54.514 36.043 106.355 1.00 45.35 N
ATOM 15 C8 A B 12 53.392 36.744 106.727 1.00 44.80 C
ATOM 16 N7 A B 12 52.932 37.533 105.789 1.00 42.80 N
ATOM 17 C5 A B 12 53.805 37.333 104.730 1.00 44.62 C
ATOM 18 C6 A B 12 53.862 37.870 103.438 1.00 45.16 C
ATOM 19 N6 A B 12 52.978 38.747 102.966 1.00 43.61 N
ATOM 20 N1 A B 12 54.872 37.467 102.631 1.00 45.90 N
ATOM 21 C2 A B 12 55.753 36.572 103.102 1.00 46.41 C
ATOM 22 N3 A B 12 55.798 35.986 104.294 1.00 45.57 N
ATOM 23 C4 A B 12 54.785 36.419 105.068 1.00 45.20 C
ATOM 24 P G B 13 58.799 33.026 108.817 1.00 44.90 P
ATOM 25 OP1 G B 13 59.129 31.839 107.988 1.00 44.05 O
ATOM 26 OP2 G B 13 58.623 32.876 110.278 1.00 44.17 O
ATOM 27 O5' G B 13 59.888 34.171 108.567 1.00 46.50 O
TER
Atoms:
OP1: (60.440,45.915,121.100)
OP2: (58.804,43.967,121.418)
C3': (59.757,44.431,116.540)
C1': (60.367,42.222,116.042)
C5': (61.310,44.550,118.569)
O6: (55.596,38.869,117.401)
O4': (61.258,42.708,117.034)
C8: (59.091,41.289,118.042)
C2: (57.230,39.785,114.390)
C6: (56.451,39.388,116.675)
C5: (57.573,40.177,117.045)
C4: (58.371,40.692,116.050)
P: (60.087,44.490,120.894)
C4': (61.129,44.149,117.135)
C2': (59.735,43.447,115.380)
O2': (60.539,43.848,114.290)
N1: (56.367,39.238,115.298)
N2: (56.987,39.504,113.103)
N3: (58.257,40.542,114.715)
N7: (58.046,40.549,118.298)
N9: (59.332,41.428,116.694)
O5': (60.163,44.152,119.344)
O3': (59.564,45.796,116.157)
OP2: (58.804,43.967,121.418)
C3': (59.757,44.431,116.540)
C1': (60.367,42.222,116.042)
C5': (61.310,44.550,118.569)
O6: (55.596,38.869,117.401)
O4': (61.258,42.708,117.034)
C8: (59.091,41.289,118.042)
C2: (57.230,39.785,114.390)
C6: (56.451,39.388,116.675)
C5: (57.573,40.177,117.045)
C4: (58.371,40.692,116.050)
P: (60.087,44.490,120.894)
C4': (61.129,44.149,117.135)
C2': (59.735,43.447,115.380)
O2': (60.539,43.848,114.290)
N1: (56.367,39.238,115.298)
N2: (56.987,39.504,113.103)
N3: (58.257,40.542,114.715)
N7: (58.046,40.549,118.298)
N9: (59.332,41.428,116.694)
O5': (60.163,44.152,119.344)
O3': (59.564,45.796,116.157)
OP1: (54.126,35.610,112.905)
OP2: (54.950,37.877,112.058)
C3': (56.690,34.580,108.909)
C1': (55.322,35.084,107.092)
C5': (54.601,34.480,110.401)
O4': (54.506,34.386,107.994)
C8: (53.392,36.744,106.727)
O2': (57.465,36.124,107.123)
C6: (53.862,37.870,103.438)
C5: (53.805,37.333,104.730)
C4: (54.785,36.419,105.068)
P: (54.182,36.626,111.831)
C4': (55.295,34.014,109.153)
C2': (56.397,35.726,107.952)
C2: (55.753,36.572,103.102)
N1: (54.872,37.467,102.631)
N3: (55.798,35.986,104.294)
N6: (52.978,38.747,102.966)
N7: (52.932,37.533,105.789)
N9: (54.514,36.043,106.355)
O5': (54.715,35.896,110.525)
O3': (57.434,33.597,108.204)
OP2: (54.950,37.877,112.058)
C3': (56.690,34.580,108.909)
C1': (55.322,35.084,107.092)
C5': (54.601,34.480,110.401)
O4': (54.506,34.386,107.994)
C8: (53.392,36.744,106.727)
O2': (57.465,36.124,107.123)
C6: (53.862,37.870,103.438)
C5: (53.805,37.333,104.730)
C4: (54.785,36.419,105.068)
P: (54.182,36.626,111.831)
C4': (55.295,34.014,109.153)
C2': (56.397,35.726,107.952)
C2: (55.753,36.572,103.102)
N1: (54.872,37.467,102.631)
N3: (55.798,35.986,104.294)
N6: (52.978,38.747,102.966)
N7: (52.932,37.533,105.789)
N9: (54.514,36.043,106.355)
O5': (54.715,35.896,110.525)
O3': (57.434,33.597,108.204)
Image (generated by PyMOL):