ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:069:088

Extra

PDB:
ATOM 1 O3' G A 68 31.352 150.028 20.118 1.00 67.57 O
ATOM 2 P G A 69 29.950 150.550 19.548 1.00 66.65 P
ATOM 3 OP1 G A 69 28.867 149.759 20.196 1.00 65.02 O
ATOM 4 OP2 G A 69 30.059 150.575 18.063 1.00 68.07 O
ATOM 5 O5' G A 69 29.860 152.033 20.113 1.00 64.22 O
ATOM 6 C5' G A 69 29.872 152.260 21.529 1.00 63.25 C
ATOM 7 C4' G A 69 30.197 153.697 21.827 1.00 62.10 C
ATOM 8 O4' G A 69 31.519 154.013 21.336 1.00 61.47 O
ATOM 9 C3' G A 69 29.282 154.718 21.185 1.00 61.62 C
ATOM 10 O3' G A 69 28.117 154.844 22.009 1.00 62.68 O
ATOM 11 C2' G A 69 30.171 155.955 21.135 1.00 61.55 C
ATOM 12 O2' G A 69 30.270 156.596 22.387 1.00 61.43 O
ATOM 13 C1' G A 69 31.537 155.333 20.838 1.00 62.12 C
ATOM 14 N9 G A 69 31.918 155.257 19.432 1.00 65.23 N
ATOM 15 C8 G A 69 31.445 154.367 18.497 1.00 66.27 C
ATOM 16 N7 G A 69 32.041 154.474 17.339 1.00 67.77 N
ATOM 17 C5 G A 69 32.949 155.513 17.511 1.00 68.26 C
ATOM 18 C6 G A 69 33.894 156.079 16.602 1.00 68.39 C
ATOM 19 O6 G A 69 34.131 155.754 15.432 1.00 68.33 O
ATOM 20 N1 G A 69 34.606 157.121 17.186 1.00 68.87 N
ATOM 21 C2 G A 69 34.440 157.567 18.474 1.00 69.06 C
ATOM 22 N2 G A 69 35.218 158.593 18.844 1.00 69.71 N
ATOM 23 N3 G A 69 33.575 157.046 19.334 1.00 68.82 N
ATOM 24 C4 G A 69 32.869 156.027 18.790 1.00 67.55 C
ATOM 25 P A A 70 27.072 156.045 21.775 1.00 64.15 P
ATOM 26 OP1 A A 70 25.770 155.649 22.359 1.00 63.42 O
ATOM 27 OP2 A A 70 27.146 156.445 20.343 1.00 66.29 O
ATOM 28 O5' A A 70 27.645 157.237 22.662 1.00 62.57 O
TER

ATOM 1 O3' G B 87 37.747 160.005 17.970 1.00 76.24 O
ATOM 2 P A B 88 39.052 159.118 18.266 1.00 75.73 P
ATOM 3 OP1 A B 88 40.115 159.507 17.297 1.00 76.30 O
ATOM 4 OP2 A B 88 38.621 157.706 18.346 1.00 76.17 O
ATOM 5 O5' A B 88 39.503 159.580 19.720 1.00 74.09 O
ATOM 6 C5' A B 88 40.322 160.747 19.903 1.00 71.63 C
ATOM 7 C4' A B 88 40.027 161.382 21.236 1.00 70.91 C
ATOM 8 O4' A B 88 38.645 161.839 21.259 1.00 71.94 O
ATOM 9 C3' A B 88 40.117 160.448 22.429 1.00 70.09 C
ATOM 10 O3' A B 88 41.454 160.257 22.872 1.00 68.40 O
ATOM 11 C2' A B 88 39.241 161.160 23.448 1.00 70.79 C
ATOM 12 O2' A B 88 39.889 162.269 24.038 1.00 71.60 O
ATOM 13 C1' A B 88 38.100 161.655 22.557 1.00 71.04 C
ATOM 14 N9 A B 88 37.029 160.665 22.460 1.00 71.23 N
ATOM 15 C8 A B 88 36.742 159.855 21.391 1.00 71.53 C
ATOM 16 N7 A B 88 35.747 159.031 21.603 1.00 73.26 N
ATOM 17 C5 A B 88 35.339 159.322 22.899 1.00 73.09 C
ATOM 18 C6 A B 88 34.321 158.782 23.723 1.00 72.57 C
ATOM 19 N6 A B 88 33.511 157.785 23.347 1.00 70.93 N
ATOM 20 N1 A B 88 34.173 159.304 24.962 1.00 72.01 N
ATOM 21 C2 A B 88 35.002 160.289 25.345 1.00 72.54 C
ATOM 22 N3 A B 88 36.000 160.871 24.669 1.00 72.65 N
ATOM 23 C4 A B 88 36.116 160.337 23.437 1.00 72.57 C
ATOM 24 P A B 89 41.944 158.784 23.283 1.00 67.76 P
ATOM 25 OP1 A B 89 43.351 158.875 23.747 1.00 68.66 O
ATOM 26 OP2 A B 89 41.604 157.859 22.175 1.00 68.74 O
ATOM 27 O5' A B 89 41.020 158.404 24.527 1.00 68.87 O
TER

Atoms:
OP1: (28.867,149.759,20.196)
OP2: (30.059,150.575,18.063)
C3': (29.282,154.718,21.185)
C1': (31.537,155.333,20.838)
C5': (29.872,152.260,21.529)
O6: (34.131,155.754,15.432)
O4': (31.519,154.013,21.336)
C8: (31.445,154.367,18.497)
C2: (34.440,157.567,18.474)
C6: (33.894,156.079,16.602)
C5: (32.949,155.513,17.511)
C4: (32.869,156.027,18.790)
P: (29.950,150.550,19.548)
C4': (30.197,153.697,21.827)
C2': (30.171,155.955,21.135)
O2': (30.270,156.596,22.387)
N1: (34.606,157.121,17.186)
N2: (35.218,158.593,18.844)
N3: (33.575,157.046,19.334)
N7: (32.041,154.474,17.339)
N9: (31.918,155.257,19.432)
O5': (29.860,152.033,20.113)
O3': (28.117,154.844,22.009)
OP1: (40.115,159.507,17.297)
OP2: (38.621,157.706,18.346)
C3': (40.117,160.448,22.429)
C1': (38.100,161.655,22.557)
C5': (40.322,160.747,19.903)
O4': (38.645,161.839,21.259)
C8: (36.742,159.855,21.391)
O2': (39.889,162.269,24.038)
C6: (34.321,158.782,23.723)
C5: (35.339,159.322,22.899)
C4: (36.116,160.337,23.437)
P: (39.052,159.118,18.266)
C4': (40.027,161.382,21.236)
C2': (39.241,161.160,23.448)
C2: (35.002,160.289,25.345)
N1: (34.173,159.304,24.962)
N3: (36.000,160.871,24.669)
N6: (33.511,157.785,23.347)
N7: (35.747,159.031,21.603)
N9: (37.029,160.665,22.460)
O5': (39.503,159.580,19.720)
O3': (41.454,160.257,22.872)
Image (generated by PyMOL):
PyMOL image
show in jmol