Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXM:A49:A52
Extra
PDB:
ATOM 1 O3' G A 48 -51.109 -58.784 12.973 1.00 61.17 O
ATOM 2 P G A 49 -52.264 -58.610 11.876 1.00 62.97 P
ATOM 3 OP1 G A 49 -53.541 -58.761 12.616 1.00 62.99 O
ATOM 4 OP2 G A 49 -51.975 -59.459 10.691 1.00 63.93 O
ATOM 5 O5' G A 49 -52.093 -57.088 11.404 1.00 61.23 O
ATOM 6 C5' G A 49 -52.850 -56.051 12.013 1.00 58.84 C
ATOM 7 C4' G A 49 -52.114 -54.729 11.964 1.00 56.63 C
ATOM 8 O4' G A 49 -50.717 -54.914 11.626 1.00 56.31 O
ATOM 9 C3' G A 49 -52.560 -53.752 10.892 1.00 56.94 C
ATOM 10 O3' G A 49 -53.812 -53.156 11.211 1.00 56.40 O
ATOM 11 C2' G A 49 -51.415 -52.751 10.992 1.00 55.63 C
ATOM 12 O2' G A 49 -51.532 -51.873 12.094 1.00 54.20 O
ATOM 13 C1' G A 49 -50.207 -53.668 11.188 1.00 55.24 C
ATOM 14 N9 G A 49 -49.439 -53.842 9.957 1.00 56.16 N
ATOM 15 C8 G A 49 -49.380 -54.959 9.161 1.00 58.02 C
ATOM 16 N7 G A 49 -48.613 -54.811 8.119 1.00 59.42 N
ATOM 17 C5 G A 49 -48.137 -53.511 8.225 1.00 57.72 C
ATOM 18 C6 G A 49 -47.261 -52.781 7.384 1.00 58.38 C
ATOM 19 O6 G A 49 -46.710 -53.156 6.342 1.00 60.17 O
ATOM 20 N1 G A 49 -47.035 -51.489 7.853 1.00 56.96 N
ATOM 21 C2 G A 49 -47.585 -50.968 9.000 1.00 55.15 C
ATOM 22 N2 G A 49 -47.253 -49.707 9.308 1.00 54.10 N
ATOM 23 N3 G A 49 -48.406 -51.642 9.792 1.00 54.54 N
ATOM 24 C4 G A 49 -48.637 -52.902 9.350 1.00 55.76 C
ATOM 25 P A A 50 -54.997 -53.071 10.133 1.00 57.93 P
ATOM 26 OP1 A A 50 -55.923 -52.022 10.607 1.00 57.51 O
ATOM 27 OP2 A A 50 -55.517 -54.435 9.895 1.00 59.40 O
ATOM 28 O5' A A 50 -54.275 -52.545 8.804 1.00 59.98 O
TER
ATOM 1 O3' A B 51 -47.952 -45.693 7.434 1.00 57.39 O
ATOM 2 P A B 52 -46.398 -46.039 7.552 1.00 56.92 P
ATOM 3 OP1 A B 52 -45.696 -45.254 6.514 1.00 58.11 O
ATOM 4 OP2 A B 52 -46.237 -47.511 7.589 1.00 57.36 O
ATOM 5 O5' A B 52 -46.007 -45.464 8.992 1.00 55.21 O
ATOM 6 C5' A B 52 -45.934 -44.054 9.194 1.00 55.18 C
ATOM 7 C4' A B 52 -46.337 -43.652 10.601 1.00 53.70 C
ATOM 8 O4' A B 52 -47.634 -44.209 10.934 1.00 54.33 O
ATOM 9 C3' A B 52 -45.429 -44.143 11.716 1.00 51.78 C
ATOM 10 O3' A B 52 -44.315 -43.305 11.865 1.00 50.45 O
ATOM 11 C2' A B 52 -46.370 -44.033 12.909 1.00 51.65 C
ATOM 12 O2' A B 52 -46.567 -42.705 13.360 1.00 51.36 O
ATOM 13 C1' A B 52 -47.653 -44.586 12.300 1.00 53.27 C
ATOM 14 N9 A B 52 -47.749 -46.042 12.430 1.00 54.20 N
ATOM 15 C8 A B 52 -47.280 -46.986 11.557 1.00 55.58 C
ATOM 16 N7 A B 52 -47.500 -48.221 11.937 1.00 56.25 N
ATOM 17 C5 A B 52 -48.156 -48.084 13.147 1.00 55.25 C
ATOM 18 C6 A B 52 -48.667 -49.027 14.067 1.00 55.12 C
ATOM 19 N6 A B 52 -48.584 -50.349 13.881 1.00 56.12 N
ATOM 20 N1 A B 52 -49.270 -48.561 15.187 1.00 54.08 N
ATOM 21 C2 A B 52 -49.354 -47.233 15.375 1.00 53.12 C
ATOM 22 N3 A B 52 -48.916 -46.255 14.578 1.00 53.43 N
ATOM 23 C4 A B 52 -48.318 -46.746 13.470 1.00 54.21 C
ATOM 24 P C B 53 -42.837 -43.857 11.591 1.00 51.11 P
ATOM 25 OP1 C B 53 -41.915 -42.728 11.831 1.00 50.46 O
ATOM 26 OP2 C B 53 -42.825 -44.528 10.273 1.00 52.88 O
ATOM 27 O5' C B 53 -42.576 -45.003 12.681 1.00 50.51 O
TER
ATOM 2 P G A 49 -52.264 -58.610 11.876 1.00 62.97 P
ATOM 3 OP1 G A 49 -53.541 -58.761 12.616 1.00 62.99 O
ATOM 4 OP2 G A 49 -51.975 -59.459 10.691 1.00 63.93 O
ATOM 5 O5' G A 49 -52.093 -57.088 11.404 1.00 61.23 O
ATOM 6 C5' G A 49 -52.850 -56.051 12.013 1.00 58.84 C
ATOM 7 C4' G A 49 -52.114 -54.729 11.964 1.00 56.63 C
ATOM 8 O4' G A 49 -50.717 -54.914 11.626 1.00 56.31 O
ATOM 9 C3' G A 49 -52.560 -53.752 10.892 1.00 56.94 C
ATOM 10 O3' G A 49 -53.812 -53.156 11.211 1.00 56.40 O
ATOM 11 C2' G A 49 -51.415 -52.751 10.992 1.00 55.63 C
ATOM 12 O2' G A 49 -51.532 -51.873 12.094 1.00 54.20 O
ATOM 13 C1' G A 49 -50.207 -53.668 11.188 1.00 55.24 C
ATOM 14 N9 G A 49 -49.439 -53.842 9.957 1.00 56.16 N
ATOM 15 C8 G A 49 -49.380 -54.959 9.161 1.00 58.02 C
ATOM 16 N7 G A 49 -48.613 -54.811 8.119 1.00 59.42 N
ATOM 17 C5 G A 49 -48.137 -53.511 8.225 1.00 57.72 C
ATOM 18 C6 G A 49 -47.261 -52.781 7.384 1.00 58.38 C
ATOM 19 O6 G A 49 -46.710 -53.156 6.342 1.00 60.17 O
ATOM 20 N1 G A 49 -47.035 -51.489 7.853 1.00 56.96 N
ATOM 21 C2 G A 49 -47.585 -50.968 9.000 1.00 55.15 C
ATOM 22 N2 G A 49 -47.253 -49.707 9.308 1.00 54.10 N
ATOM 23 N3 G A 49 -48.406 -51.642 9.792 1.00 54.54 N
ATOM 24 C4 G A 49 -48.637 -52.902 9.350 1.00 55.76 C
ATOM 25 P A A 50 -54.997 -53.071 10.133 1.00 57.93 P
ATOM 26 OP1 A A 50 -55.923 -52.022 10.607 1.00 57.51 O
ATOM 27 OP2 A A 50 -55.517 -54.435 9.895 1.00 59.40 O
ATOM 28 O5' A A 50 -54.275 -52.545 8.804 1.00 59.98 O
TER
ATOM 1 O3' A B 51 -47.952 -45.693 7.434 1.00 57.39 O
ATOM 2 P A B 52 -46.398 -46.039 7.552 1.00 56.92 P
ATOM 3 OP1 A B 52 -45.696 -45.254 6.514 1.00 58.11 O
ATOM 4 OP2 A B 52 -46.237 -47.511 7.589 1.00 57.36 O
ATOM 5 O5' A B 52 -46.007 -45.464 8.992 1.00 55.21 O
ATOM 6 C5' A B 52 -45.934 -44.054 9.194 1.00 55.18 C
ATOM 7 C4' A B 52 -46.337 -43.652 10.601 1.00 53.70 C
ATOM 8 O4' A B 52 -47.634 -44.209 10.934 1.00 54.33 O
ATOM 9 C3' A B 52 -45.429 -44.143 11.716 1.00 51.78 C
ATOM 10 O3' A B 52 -44.315 -43.305 11.865 1.00 50.45 O
ATOM 11 C2' A B 52 -46.370 -44.033 12.909 1.00 51.65 C
ATOM 12 O2' A B 52 -46.567 -42.705 13.360 1.00 51.36 O
ATOM 13 C1' A B 52 -47.653 -44.586 12.300 1.00 53.27 C
ATOM 14 N9 A B 52 -47.749 -46.042 12.430 1.00 54.20 N
ATOM 15 C8 A B 52 -47.280 -46.986 11.557 1.00 55.58 C
ATOM 16 N7 A B 52 -47.500 -48.221 11.937 1.00 56.25 N
ATOM 17 C5 A B 52 -48.156 -48.084 13.147 1.00 55.25 C
ATOM 18 C6 A B 52 -48.667 -49.027 14.067 1.00 55.12 C
ATOM 19 N6 A B 52 -48.584 -50.349 13.881 1.00 56.12 N
ATOM 20 N1 A B 52 -49.270 -48.561 15.187 1.00 54.08 N
ATOM 21 C2 A B 52 -49.354 -47.233 15.375 1.00 53.12 C
ATOM 22 N3 A B 52 -48.916 -46.255 14.578 1.00 53.43 N
ATOM 23 C4 A B 52 -48.318 -46.746 13.470 1.00 54.21 C
ATOM 24 P C B 53 -42.837 -43.857 11.591 1.00 51.11 P
ATOM 25 OP1 C B 53 -41.915 -42.728 11.831 1.00 50.46 O
ATOM 26 OP2 C B 53 -42.825 -44.528 10.273 1.00 52.88 O
ATOM 27 O5' C B 53 -42.576 -45.003 12.681 1.00 50.51 O
TER
Atoms:
OP1: (-53.541,-58.761,12.616)
OP2: (-51.975,-59.459,10.691)
C3': (-52.560,-53.752,10.892)
C1': (-50.207,-53.668,11.188)
C5': (-52.850,-56.051,12.013)
O6: (-46.710,-53.156,6.342)
O4': (-50.717,-54.914,11.626)
C8: (-49.380,-54.959,9.161)
C2: (-47.585,-50.968,9.000)
C6: (-47.261,-52.781,7.384)
C5: (-48.137,-53.511,8.225)
C4: (-48.637,-52.902,9.350)
P: (-52.264,-58.610,11.876)
C4': (-52.114,-54.729,11.964)
C2': (-51.415,-52.751,10.992)
O2': (-51.532,-51.873,12.094)
N1: (-47.035,-51.489,7.853)
N2: (-47.253,-49.707,9.308)
N3: (-48.406,-51.642,9.792)
N7: (-48.613,-54.811,8.119)
N9: (-49.439,-53.842,9.957)
O5': (-52.093,-57.088,11.404)
O3': (-53.812,-53.156,11.211)
OP2: (-51.975,-59.459,10.691)
C3': (-52.560,-53.752,10.892)
C1': (-50.207,-53.668,11.188)
C5': (-52.850,-56.051,12.013)
O6: (-46.710,-53.156,6.342)
O4': (-50.717,-54.914,11.626)
C8: (-49.380,-54.959,9.161)
C2: (-47.585,-50.968,9.000)
C6: (-47.261,-52.781,7.384)
C5: (-48.137,-53.511,8.225)
C4: (-48.637,-52.902,9.350)
P: (-52.264,-58.610,11.876)
C4': (-52.114,-54.729,11.964)
C2': (-51.415,-52.751,10.992)
O2': (-51.532,-51.873,12.094)
N1: (-47.035,-51.489,7.853)
N2: (-47.253,-49.707,9.308)
N3: (-48.406,-51.642,9.792)
N7: (-48.613,-54.811,8.119)
N9: (-49.439,-53.842,9.957)
O5': (-52.093,-57.088,11.404)
O3': (-53.812,-53.156,11.211)
OP1: (-45.696,-45.254,6.514)
OP2: (-46.237,-47.511,7.589)
C3': (-45.429,-44.143,11.716)
C1': (-47.653,-44.586,12.300)
C5': (-45.934,-44.054,9.194)
O4': (-47.634,-44.209,10.934)
C8: (-47.280,-46.986,11.557)
O2': (-46.567,-42.705,13.360)
C6: (-48.667,-49.027,14.067)
C5: (-48.156,-48.084,13.147)
C4: (-48.318,-46.746,13.470)
P: (-46.398,-46.039,7.552)
C4': (-46.337,-43.652,10.601)
C2': (-46.370,-44.033,12.909)
C2: (-49.354,-47.233,15.375)
N1: (-49.270,-48.561,15.187)
N3: (-48.916,-46.255,14.578)
N6: (-48.584,-50.349,13.881)
N7: (-47.500,-48.221,11.937)
N9: (-47.749,-46.042,12.430)
O5': (-46.007,-45.464,8.992)
O3': (-44.315,-43.305,11.865)
OP2: (-46.237,-47.511,7.589)
C3': (-45.429,-44.143,11.716)
C1': (-47.653,-44.586,12.300)
C5': (-45.934,-44.054,9.194)
O4': (-47.634,-44.209,10.934)
C8: (-47.280,-46.986,11.557)
O2': (-46.567,-42.705,13.360)
C6: (-48.667,-49.027,14.067)
C5: (-48.156,-48.084,13.147)
C4: (-48.318,-46.746,13.470)
P: (-46.398,-46.039,7.552)
C4': (-46.337,-43.652,10.601)
C2': (-46.370,-44.033,12.909)
C2: (-49.354,-47.233,15.375)
N1: (-49.270,-48.561,15.187)
N3: (-48.916,-46.255,14.578)
N6: (-48.584,-50.349,13.881)
N7: (-47.500,-48.221,11.937)
N9: (-47.749,-46.042,12.430)
O5': (-46.007,-45.464,8.992)
O3': (-44.315,-43.305,11.865)
Image (generated by PyMOL):