ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1U9S:A125:A128

Extra

PDB:
ATOM 1 O3' G A 124 25.251 27.068 108.498 1.00100.76 O
ATOM 2 P G A 125 23.877 27.837 108.844 1.00103.44 P
ATOM 3 OP1 G A 125 23.549 28.707 107.689 1.00104.84 O
ATOM 4 OP2 G A 125 23.961 28.431 110.205 1.00101.51 O
ATOM 5 O5' G A 125 22.822 26.653 108.897 1.00 96.09 O
ATOM 6 C5' G A 125 22.609 25.873 107.743 1.00 92.83 C
ATOM 7 C4' G A 125 22.001 24.551 108.101 1.00 92.43 C
ATOM 8 O4' G A 125 22.951 23.783 108.894 1.00 91.52 O
ATOM 9 C3' G A 125 20.777 24.639 108.997 1.00 93.29 C
ATOM 10 O3' G A 125 19.580 24.972 108.282 1.00 96.59 O
ATOM 11 C2' G A 125 20.753 23.244 109.610 1.00 90.98 C
ATOM 12 O2' G A 125 20.244 22.299 108.694 1.00 85.33 O
ATOM 13 C1' G A 125 22.246 22.981 109.835 1.00 89.89 C
ATOM 14 N9 G A 125 22.636 23.357 111.192 1.00 86.59 N
ATOM 15 C8 G A 125 23.158 24.559 111.603 1.00 90.01 C
ATOM 16 N7 G A 125 23.283 24.645 112.901 1.00 90.69 N
ATOM 17 C5 G A 125 22.845 23.415 113.372 1.00 88.41 C
ATOM 18 C6 G A 125 22.734 22.921 114.712 1.00 94.38 C
ATOM 19 O6 G A 125 23.006 23.501 115.787 1.00100.33 O
ATOM 20 N1 G A 125 22.250 21.613 114.732 1.00 89.20 N
ATOM 21 C2 G A 125 21.914 20.879 113.621 1.00 81.03 C
ATOM 22 N2 G A 125 21.468 19.635 113.857 1.00 69.51 N
ATOM 23 N3 G A 125 22.009 21.331 112.374 1.00 78.00 N
ATOM 24 C4 G A 125 22.473 22.596 112.327 1.00 81.58 C
ATOM 25 P C A 126 18.526 26.020 108.922 1.00 96.75 P
ATOM 26 OP1 C A 126 17.184 25.804 108.318 1.00 91.40 O
ATOM 27 OP2 C A 126 19.138 27.382 108.898 1.00 86.08 O
ATOM 28 O5' C A 126 18.410 25.550 110.435 1.00 94.02 O
TER

ATOM 1 O3' A B 127 17.791 17.869 115.220 1.00 79.96 O
ATOM 2 P A B 128 19.190 17.301 115.816 1.00 79.55 P
ATOM 3 OP1 A B 128 18.961 17.008 117.249 1.00 78.13 O
ATOM 4 OP2 A B 128 20.311 18.212 115.432 1.00 71.04 O
ATOM 5 O5' A B 128 19.365 15.890 115.092 1.00 73.80 O
ATOM 6 C5' A B 128 18.443 14.820 115.317 1.00 70.63 C
ATOM 7 C4' A B 128 18.482 13.861 114.150 1.00 76.01 C
ATOM 8 O4' A B 128 18.094 14.567 112.946 1.00 77.72 O
ATOM 9 C3' A B 128 19.840 13.267 113.824 1.00 78.78 C
ATOM 10 O3' A B 128 20.048 12.103 114.614 1.00 83.73 O
ATOM 11 C2' A B 128 19.700 12.933 112.340 1.00 74.37 C
ATOM 12 O2' A B 128 18.952 11.753 112.115 1.00 72.08 O
ATOM 13 C1' A B 128 18.875 14.121 111.847 1.00 73.61 C
ATOM 14 N9 A B 128 19.657 15.272 111.393 1.00 72.20 N
ATOM 15 C8 A B 128 20.301 16.194 112.187 1.00 75.87 C
ATOM 16 N7 A B 128 20.865 17.171 111.515 1.00 76.62 N
ATOM 17 C5 A B 128 20.587 16.864 110.189 1.00 74.00 C
ATOM 18 C6 A B 128 20.907 17.513 108.982 1.00 74.76 C
ATOM 19 N6 A B 128 21.603 18.654 108.913 1.00 76.90 N
ATOM 20 N1 A B 128 20.482 16.945 107.834 1.00 71.25 N
ATOM 21 C2 A B 128 19.786 15.805 107.905 1.00 69.89 C
ATOM 22 N3 A B 128 19.424 15.099 108.974 1.00 69.25 N
ATOM 23 C4 A B 128 19.858 15.689 110.098 1.00 70.59 C
ATOM 24 P C B 129 21.409 11.944 115.452 1.00 83.18 P
ATOM 25 OP1 C B 129 21.687 10.478 115.491 1.00 78.70 O
ATOM 26 OP2 C B 129 21.277 12.701 116.731 1.00 78.30 O
ATOM 27 O5' C B 129 22.503 12.690 114.555 1.00 74.94 O
TER

Atoms:
OP1: (23.549,28.707,107.689)
OP2: (23.961,28.431,110.205)
C3': (20.777,24.639,108.997)
C1': (22.246,22.981,109.835)
C5': (22.609,25.873,107.743)
O6: (23.006,23.501,115.787)
O4': (22.951,23.783,108.894)
C8: (23.158,24.559,111.603)
C2: (21.914,20.879,113.621)
C6: (22.734,22.921,114.712)
C5: (22.845,23.415,113.372)
C4: (22.473,22.596,112.327)
P: (23.877,27.837,108.844)
C4': (22.001,24.551,108.101)
C2': (20.753,23.244,109.610)
O2': (20.244,22.299,108.694)
N1: (22.250,21.613,114.732)
N2: (21.468,19.635,113.857)
N3: (22.009,21.331,112.374)
N7: (23.283,24.645,112.901)
N9: (22.636,23.357,111.192)
O5': (22.822,26.653,108.897)
O3': (19.580,24.972,108.282)
OP1: (18.961,17.008,117.249)
OP2: (20.311,18.212,115.432)
C3': (19.840,13.267,113.824)
C1': (18.875,14.121,111.847)
C5': (18.443,14.820,115.317)
O4': (18.094,14.567,112.946)
C8: (20.301,16.194,112.187)
O2': (18.952,11.753,112.115)
C6: (20.907,17.513,108.982)
C5: (20.587,16.864,110.189)
C4: (19.858,15.689,110.098)
P: (19.190,17.301,115.816)
C4': (18.482,13.861,114.150)
C2': (19.700,12.933,112.340)
C2: (19.786,15.805,107.905)
N1: (20.482,16.945,107.834)
N3: (19.424,15.099,108.974)
N6: (21.603,18.654,108.913)
N7: (20.865,17.171,111.515)
N9: (19.657,15.272,111.393)
O5': (19.365,15.890,115.092)
O3': (20.048,12.103,114.614)
Image (generated by PyMOL):
PyMOL image
show in jmol