Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2GDI:Y30:Y33
Extra
PDB:
ATOM 1 O3' U A 29 17.378 21.254 49.996 1.00 33.67 O
ATOM 2 P G A 30 18.942 21.470 49.726 1.00 33.41 P
ATOM 3 OP1 G A 30 19.392 22.616 50.544 1.00 33.78 O
ATOM 4 OP2 G A 30 19.153 21.476 48.262 1.00 33.99 O
ATOM 5 O5' G A 30 19.603 20.128 50.296 1.00 33.89 O
ATOM 6 C5' G A 30 19.367 19.723 51.639 1.00 32.97 C
ATOM 7 C4' G A 30 19.673 18.247 51.824 1.00 32.58 C
ATOM 8 O4' G A 30 18.780 17.440 51.011 1.00 32.23 O
ATOM 9 C3' G A 30 21.059 17.804 51.384 1.00 32.76 C
ATOM 10 O3' G A 30 22.036 18.128 52.372 1.00 33.31 O
ATOM 11 C2' G A 30 20.837 16.300 51.265 1.00 32.68 C
ATOM 12 O2' G A 30 20.883 15.627 52.510 1.00 33.44 O
ATOM 13 C1' G A 30 19.437 16.239 50.654 1.00 32.28 C
ATOM 14 N9 G A 30 19.537 16.127 49.203 1.00 32.41 N
ATOM 15 C8 G A 30 19.745 17.136 48.291 1.00 31.89 C
ATOM 16 N7 G A 30 19.841 16.708 47.063 1.00 31.94 N
ATOM 17 C5 G A 30 19.706 15.329 47.167 1.00 32.18 C
ATOM 18 C6 G A 30 19.727 14.326 46.170 1.00 32.40 C
ATOM 19 O6 G A 30 19.870 14.464 44.947 1.00 32.59 O
ATOM 20 N1 G A 30 19.550 13.054 46.710 1.00 32.45 N
ATOM 21 C2 G A 30 19.374 12.785 48.048 1.00 32.34 C
ATOM 22 N2 G A 30 19.213 11.498 48.390 1.00 31.69 N
ATOM 23 N3 G A 30 19.358 13.715 48.992 1.00 32.07 N
ATOM 24 C4 G A 30 19.526 14.957 48.479 1.00 32.30 C
ATOM 25 P A A 31 23.552 18.451 51.958 1.00 33.11 P
ATOM 26 OP1 A A 31 24.250 18.933 53.169 1.00 33.38 O
ATOM 27 OP2 A A 31 23.541 19.288 50.738 1.00 33.48 O
ATOM 28 O5' A A 31 24.138 17.014 51.561 1.00 33.28 O
TER
ATOM 1 O3' G B 32 22.302 9.589 46.549 1.00 31.27 O
ATOM 2 P A B 33 21.172 9.907 45.462 1.00 31.52 P
ATOM 3 OP1 A B 33 21.362 8.958 44.342 1.00 30.72 O
ATOM 4 OP2 A B 33 21.169 11.364 45.203 1.00 31.47 O
ATOM 5 O5' A B 33 19.817 9.555 46.239 1.00 31.25 O
ATOM 6 C5' A B 33 19.465 8.205 46.511 1.00 31.80 C
ATOM 7 C4' A B 33 17.957 8.045 46.520 1.00 32.52 C
ATOM 8 O4' A B 33 17.390 8.988 47.458 1.00 31.88 O
ATOM 9 C3' A B 33 17.266 8.318 45.184 1.00 33.15 C
ATOM 10 O3' A B 33 16.596 7.153 44.743 1.00 35.80 O
ATOM 11 C2' A B 33 16.257 9.426 45.472 1.00 32.27 C
ATOM 12 O2' A B 33 15.008 9.173 44.857 1.00 32.25 O
ATOM 13 C1' A B 33 16.113 9.344 46.985 1.00 31.07 C
ATOM 14 N9 A B 33 15.701 10.597 47.610 1.00 30.23 N
ATOM 15 C8 A B 33 16.035 11.867 47.230 1.00 30.00 C
ATOM 16 N7 A B 33 15.503 12.799 47.985 1.00 30.35 N
ATOM 17 C5 A B 33 14.771 12.090 48.923 1.00 29.57 C
ATOM 18 C6 A B 33 13.971 12.493 50.010 1.00 29.47 C
ATOM 19 N6 A B 33 13.772 13.770 50.348 1.00 29.68 N
ATOM 20 N1 A B 33 13.388 11.526 50.746 1.00 28.64 N
ATOM 21 C2 A B 33 13.586 10.247 50.413 1.00 28.49 C
ATOM 22 N3 A B 33 14.312 9.746 49.418 1.00 28.93 N
ATOM 23 C4 A B 33 14.884 10.731 48.706 1.00 29.61 C
ATOM 24 P A B 34 17.196 6.301 43.533 1.00 37.94 P
ATOM 25 OP1 A B 34 17.561 7.238 42.447 1.00 37.70 O
ATOM 26 OP2 A B 34 16.268 5.180 43.265 1.00 38.14 O
ATOM 27 O5' A B 34 18.523 5.706 44.198 1.00 38.95 O
TER
ATOM 2 P G A 30 18.942 21.470 49.726 1.00 33.41 P
ATOM 3 OP1 G A 30 19.392 22.616 50.544 1.00 33.78 O
ATOM 4 OP2 G A 30 19.153 21.476 48.262 1.00 33.99 O
ATOM 5 O5' G A 30 19.603 20.128 50.296 1.00 33.89 O
ATOM 6 C5' G A 30 19.367 19.723 51.639 1.00 32.97 C
ATOM 7 C4' G A 30 19.673 18.247 51.824 1.00 32.58 C
ATOM 8 O4' G A 30 18.780 17.440 51.011 1.00 32.23 O
ATOM 9 C3' G A 30 21.059 17.804 51.384 1.00 32.76 C
ATOM 10 O3' G A 30 22.036 18.128 52.372 1.00 33.31 O
ATOM 11 C2' G A 30 20.837 16.300 51.265 1.00 32.68 C
ATOM 12 O2' G A 30 20.883 15.627 52.510 1.00 33.44 O
ATOM 13 C1' G A 30 19.437 16.239 50.654 1.00 32.28 C
ATOM 14 N9 G A 30 19.537 16.127 49.203 1.00 32.41 N
ATOM 15 C8 G A 30 19.745 17.136 48.291 1.00 31.89 C
ATOM 16 N7 G A 30 19.841 16.708 47.063 1.00 31.94 N
ATOM 17 C5 G A 30 19.706 15.329 47.167 1.00 32.18 C
ATOM 18 C6 G A 30 19.727 14.326 46.170 1.00 32.40 C
ATOM 19 O6 G A 30 19.870 14.464 44.947 1.00 32.59 O
ATOM 20 N1 G A 30 19.550 13.054 46.710 1.00 32.45 N
ATOM 21 C2 G A 30 19.374 12.785 48.048 1.00 32.34 C
ATOM 22 N2 G A 30 19.213 11.498 48.390 1.00 31.69 N
ATOM 23 N3 G A 30 19.358 13.715 48.992 1.00 32.07 N
ATOM 24 C4 G A 30 19.526 14.957 48.479 1.00 32.30 C
ATOM 25 P A A 31 23.552 18.451 51.958 1.00 33.11 P
ATOM 26 OP1 A A 31 24.250 18.933 53.169 1.00 33.38 O
ATOM 27 OP2 A A 31 23.541 19.288 50.738 1.00 33.48 O
ATOM 28 O5' A A 31 24.138 17.014 51.561 1.00 33.28 O
TER
ATOM 1 O3' G B 32 22.302 9.589 46.549 1.00 31.27 O
ATOM 2 P A B 33 21.172 9.907 45.462 1.00 31.52 P
ATOM 3 OP1 A B 33 21.362 8.958 44.342 1.00 30.72 O
ATOM 4 OP2 A B 33 21.169 11.364 45.203 1.00 31.47 O
ATOM 5 O5' A B 33 19.817 9.555 46.239 1.00 31.25 O
ATOM 6 C5' A B 33 19.465 8.205 46.511 1.00 31.80 C
ATOM 7 C4' A B 33 17.957 8.045 46.520 1.00 32.52 C
ATOM 8 O4' A B 33 17.390 8.988 47.458 1.00 31.88 O
ATOM 9 C3' A B 33 17.266 8.318 45.184 1.00 33.15 C
ATOM 10 O3' A B 33 16.596 7.153 44.743 1.00 35.80 O
ATOM 11 C2' A B 33 16.257 9.426 45.472 1.00 32.27 C
ATOM 12 O2' A B 33 15.008 9.173 44.857 1.00 32.25 O
ATOM 13 C1' A B 33 16.113 9.344 46.985 1.00 31.07 C
ATOM 14 N9 A B 33 15.701 10.597 47.610 1.00 30.23 N
ATOM 15 C8 A B 33 16.035 11.867 47.230 1.00 30.00 C
ATOM 16 N7 A B 33 15.503 12.799 47.985 1.00 30.35 N
ATOM 17 C5 A B 33 14.771 12.090 48.923 1.00 29.57 C
ATOM 18 C6 A B 33 13.971 12.493 50.010 1.00 29.47 C
ATOM 19 N6 A B 33 13.772 13.770 50.348 1.00 29.68 N
ATOM 20 N1 A B 33 13.388 11.526 50.746 1.00 28.64 N
ATOM 21 C2 A B 33 13.586 10.247 50.413 1.00 28.49 C
ATOM 22 N3 A B 33 14.312 9.746 49.418 1.00 28.93 N
ATOM 23 C4 A B 33 14.884 10.731 48.706 1.00 29.61 C
ATOM 24 P A B 34 17.196 6.301 43.533 1.00 37.94 P
ATOM 25 OP1 A B 34 17.561 7.238 42.447 1.00 37.70 O
ATOM 26 OP2 A B 34 16.268 5.180 43.265 1.00 38.14 O
ATOM 27 O5' A B 34 18.523 5.706 44.198 1.00 38.95 O
TER
Atoms:
OP1: (19.392,22.616,50.544)
OP2: (19.153,21.476,48.262)
C3': (21.059,17.804,51.384)
C1': (19.437,16.239,50.654)
C5': (19.367,19.723,51.639)
O6: (19.870,14.464,44.947)
O4': (18.780,17.440,51.011)
C8: (19.745,17.136,48.291)
C2: (19.374,12.785,48.048)
C6: (19.727,14.326,46.170)
C5: (19.706,15.329,47.167)
C4: (19.526,14.957,48.479)
P: (18.942,21.470,49.726)
C4': (19.673,18.247,51.824)
C2': (20.837,16.300,51.265)
O2': (20.883,15.627,52.510)
N1: (19.550,13.054,46.710)
N2: (19.213,11.498,48.390)
N3: (19.358,13.715,48.992)
N7: (19.841,16.708,47.063)
N9: (19.537,16.127,49.203)
O5': (19.603,20.128,50.296)
O3': (22.036,18.128,52.372)
OP2: (19.153,21.476,48.262)
C3': (21.059,17.804,51.384)
C1': (19.437,16.239,50.654)
C5': (19.367,19.723,51.639)
O6: (19.870,14.464,44.947)
O4': (18.780,17.440,51.011)
C8: (19.745,17.136,48.291)
C2: (19.374,12.785,48.048)
C6: (19.727,14.326,46.170)
C5: (19.706,15.329,47.167)
C4: (19.526,14.957,48.479)
P: (18.942,21.470,49.726)
C4': (19.673,18.247,51.824)
C2': (20.837,16.300,51.265)
O2': (20.883,15.627,52.510)
N1: (19.550,13.054,46.710)
N2: (19.213,11.498,48.390)
N3: (19.358,13.715,48.992)
N7: (19.841,16.708,47.063)
N9: (19.537,16.127,49.203)
O5': (19.603,20.128,50.296)
O3': (22.036,18.128,52.372)
OP1: (21.362,8.958,44.342)
OP2: (21.169,11.364,45.203)
C3': (17.266,8.318,45.184)
C1': (16.113,9.344,46.985)
C5': (19.465,8.205,46.511)
O4': (17.390,8.988,47.458)
C8: (16.035,11.867,47.230)
O2': (15.008,9.173,44.857)
C6: (13.971,12.493,50.010)
C5: (14.771,12.090,48.923)
C4: (14.884,10.731,48.706)
P: (21.172,9.907,45.462)
C4': (17.957,8.045,46.520)
C2': (16.257,9.426,45.472)
C2: (13.586,10.247,50.413)
N1: (13.388,11.526,50.746)
N3: (14.312,9.746,49.418)
N6: (13.772,13.770,50.348)
N7: (15.503,12.799,47.985)
N9: (15.701,10.597,47.610)
O5': (19.817,9.555,46.239)
O3': (16.596,7.153,44.743)
OP2: (21.169,11.364,45.203)
C3': (17.266,8.318,45.184)
C1': (16.113,9.344,46.985)
C5': (19.465,8.205,46.511)
O4': (17.390,8.988,47.458)
C8: (16.035,11.867,47.230)
O2': (15.008,9.173,44.857)
C6: (13.971,12.493,50.010)
C5: (14.771,12.090,48.923)
C4: (14.884,10.731,48.706)
P: (21.172,9.907,45.462)
C4': (17.957,8.045,46.520)
C2': (16.257,9.426,45.472)
C2: (13.586,10.247,50.413)
N1: (13.388,11.526,50.746)
N3: (14.312,9.746,49.418)
N6: (13.772,13.770,50.348)
N7: (15.503,12.799,47.985)
N9: (15.701,10.597,47.610)
O5': (19.817,9.555,46.239)
O3': (16.596,7.153,44.743)
Image (generated by PyMOL):