Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0576:0557
Extra
PDB:
ATOM 1 O3' A A 575 -9.515 87.547 110.352 1.00 78.31 O
ATOM 2 P G A 576 -9.843 86.128 109.686 1.00 80.42 P
ATOM 3 OP1 G A 576 -11.317 86.047 109.557 1.00 81.65 O
ATOM 4 OP2 G A 576 -9.108 85.082 110.449 1.00 79.84 O
ATOM 5 O5' G A 576 -9.231 86.245 108.219 1.00 81.92 O
ATOM 6 C5' G A 576 -7.859 86.642 108.028 1.00 82.29 C
ATOM 7 C4' G A 576 -7.765 88.142 107.816 1.00 81.33 C
ATOM 8 O4' G A 576 -6.475 88.627 108.254 1.00 80.20 O
ATOM 9 C3' G A 576 -7.915 88.675 106.400 1.00 80.70 C
ATOM 10 O3' G A 576 -8.336 90.037 106.548 1.00 82.03 O
ATOM 11 C2' G A 576 -6.480 88.556 105.889 1.00 79.14 C
ATOM 12 O2' G A 576 -6.185 89.382 104.781 1.00 78.44 O
ATOM 13 C1' G A 576 -5.694 88.984 107.132 1.00 77.69 C
ATOM 14 N9 G A 576 -4.374 88.391 107.328 1.00 74.09 N
ATOM 15 C8 G A 576 -3.869 87.234 106.779 1.00 72.52 C
ATOM 16 N7 G A 576 -2.664 86.958 107.195 1.00 70.40 N
ATOM 17 C5 G A 576 -2.353 87.998 108.061 1.00 69.69 C
ATOM 18 C6 G A 576 -1.186 88.240 108.818 1.00 69.83 C
ATOM 19 O6 G A 576 -0.151 87.560 108.876 1.00 70.10 O
ATOM 20 N1 G A 576 -1.296 89.412 109.566 1.00 68.71 N
ATOM 21 C2 G A 576 -2.388 90.244 109.577 1.00 67.91 C
ATOM 22 N2 G A 576 -2.304 91.334 110.357 1.00 67.52 N
ATOM 23 N3 G A 576 -3.479 90.027 108.875 1.00 68.14 N
ATOM 24 C4 G A 576 -3.394 88.893 108.146 1.00 70.08 C
ATOM 25 P U A 577 -8.710 90.931 105.261 1.00 82.76 P
ATOM 26 OP1 U A 577 -9.297 90.056 104.206 1.00 80.31 O
ATOM 27 OP2 U A 577 -7.531 91.773 104.941 1.00 83.05 O
ATOM 28 O5' U A 577 -9.824 91.928 105.824 1.00 82.41 O
TER
ATOM 1 O3' G B 556 0.112 94.308 112.127 1.00 65.70 O
ATOM 2 P A B 557 -0.442 93.113 113.043 1.00 66.35 P
ATOM 3 OP1 A B 557 0.235 93.251 114.357 1.00 67.06 O
ATOM 4 OP2 A B 557 -0.349 91.825 112.298 1.00 63.43 O
ATOM 5 O5' A B 557 -1.985 93.478 113.202 1.00 66.31 O
ATOM 6 C5' A B 557 -2.544 93.791 114.486 1.00 65.58 C
ATOM 7 C4' A B 557 -2.314 95.241 114.809 1.00 65.78 C
ATOM 8 O4' A B 557 -2.683 96.070 113.676 1.00 64.47 O
ATOM 9 C3' A B 557 -3.134 95.761 115.973 1.00 67.41 C
ATOM 10 O3' A B 557 -2.530 95.487 117.229 1.00 71.42 O
ATOM 11 C2' A B 557 -3.304 97.235 115.629 1.00 66.30 C
ATOM 12 O2' A B 557 -2.182 98.044 115.916 1.00 64.45 O
ATOM 13 C1' A B 557 -3.506 97.140 114.116 1.00 65.77 C
ATOM 14 N9 A B 557 -4.893 96.811 113.778 1.00 65.52 N
ATOM 15 C8 A B 557 -5.364 95.692 113.126 1.00 66.08 C
ATOM 16 N7 A B 557 -6.667 95.666 112.994 1.00 65.55 N
ATOM 17 C5 A B 557 -7.085 96.848 113.590 1.00 64.74 C
ATOM 18 C6 A B 557 -8.353 97.408 113.773 1.00 64.05 C
ATOM 19 N6 A B 557 -9.477 96.830 113.350 1.00 63.16 N
ATOM 20 N1 A B 557 -8.430 98.601 114.409 1.00 64.41 N
ATOM 21 C2 A B 557 -7.295 99.183 114.820 1.00 62.81 C
ATOM 22 N3 A B 557 -6.043 98.758 114.701 1.00 64.14 N
ATOM 23 C4 A B 557 -6.005 97.567 114.072 1.00 64.91 C
ATOM 24 P C B 558 -3.459 95.203 118.510 1.00 73.01 P
ATOM 25 OP1 C B 558 -2.582 94.771 119.630 1.00 74.50 O
ATOM 26 OP2 C B 558 -4.578 94.326 118.077 1.00 73.30 O
ATOM 27 O5' C B 558 -4.014 96.646 118.883 1.00 71.59 O
TER
ATOM 2 P G A 576 -9.843 86.128 109.686 1.00 80.42 P
ATOM 3 OP1 G A 576 -11.317 86.047 109.557 1.00 81.65 O
ATOM 4 OP2 G A 576 -9.108 85.082 110.449 1.00 79.84 O
ATOM 5 O5' G A 576 -9.231 86.245 108.219 1.00 81.92 O
ATOM 6 C5' G A 576 -7.859 86.642 108.028 1.00 82.29 C
ATOM 7 C4' G A 576 -7.765 88.142 107.816 1.00 81.33 C
ATOM 8 O4' G A 576 -6.475 88.627 108.254 1.00 80.20 O
ATOM 9 C3' G A 576 -7.915 88.675 106.400 1.00 80.70 C
ATOM 10 O3' G A 576 -8.336 90.037 106.548 1.00 82.03 O
ATOM 11 C2' G A 576 -6.480 88.556 105.889 1.00 79.14 C
ATOM 12 O2' G A 576 -6.185 89.382 104.781 1.00 78.44 O
ATOM 13 C1' G A 576 -5.694 88.984 107.132 1.00 77.69 C
ATOM 14 N9 G A 576 -4.374 88.391 107.328 1.00 74.09 N
ATOM 15 C8 G A 576 -3.869 87.234 106.779 1.00 72.52 C
ATOM 16 N7 G A 576 -2.664 86.958 107.195 1.00 70.40 N
ATOM 17 C5 G A 576 -2.353 87.998 108.061 1.00 69.69 C
ATOM 18 C6 G A 576 -1.186 88.240 108.818 1.00 69.83 C
ATOM 19 O6 G A 576 -0.151 87.560 108.876 1.00 70.10 O
ATOM 20 N1 G A 576 -1.296 89.412 109.566 1.00 68.71 N
ATOM 21 C2 G A 576 -2.388 90.244 109.577 1.00 67.91 C
ATOM 22 N2 G A 576 -2.304 91.334 110.357 1.00 67.52 N
ATOM 23 N3 G A 576 -3.479 90.027 108.875 1.00 68.14 N
ATOM 24 C4 G A 576 -3.394 88.893 108.146 1.00 70.08 C
ATOM 25 P U A 577 -8.710 90.931 105.261 1.00 82.76 P
ATOM 26 OP1 U A 577 -9.297 90.056 104.206 1.00 80.31 O
ATOM 27 OP2 U A 577 -7.531 91.773 104.941 1.00 83.05 O
ATOM 28 O5' U A 577 -9.824 91.928 105.824 1.00 82.41 O
TER
ATOM 1 O3' G B 556 0.112 94.308 112.127 1.00 65.70 O
ATOM 2 P A B 557 -0.442 93.113 113.043 1.00 66.35 P
ATOM 3 OP1 A B 557 0.235 93.251 114.357 1.00 67.06 O
ATOM 4 OP2 A B 557 -0.349 91.825 112.298 1.00 63.43 O
ATOM 5 O5' A B 557 -1.985 93.478 113.202 1.00 66.31 O
ATOM 6 C5' A B 557 -2.544 93.791 114.486 1.00 65.58 C
ATOM 7 C4' A B 557 -2.314 95.241 114.809 1.00 65.78 C
ATOM 8 O4' A B 557 -2.683 96.070 113.676 1.00 64.47 O
ATOM 9 C3' A B 557 -3.134 95.761 115.973 1.00 67.41 C
ATOM 10 O3' A B 557 -2.530 95.487 117.229 1.00 71.42 O
ATOM 11 C2' A B 557 -3.304 97.235 115.629 1.00 66.30 C
ATOM 12 O2' A B 557 -2.182 98.044 115.916 1.00 64.45 O
ATOM 13 C1' A B 557 -3.506 97.140 114.116 1.00 65.77 C
ATOM 14 N9 A B 557 -4.893 96.811 113.778 1.00 65.52 N
ATOM 15 C8 A B 557 -5.364 95.692 113.126 1.00 66.08 C
ATOM 16 N7 A B 557 -6.667 95.666 112.994 1.00 65.55 N
ATOM 17 C5 A B 557 -7.085 96.848 113.590 1.00 64.74 C
ATOM 18 C6 A B 557 -8.353 97.408 113.773 1.00 64.05 C
ATOM 19 N6 A B 557 -9.477 96.830 113.350 1.00 63.16 N
ATOM 20 N1 A B 557 -8.430 98.601 114.409 1.00 64.41 N
ATOM 21 C2 A B 557 -7.295 99.183 114.820 1.00 62.81 C
ATOM 22 N3 A B 557 -6.043 98.758 114.701 1.00 64.14 N
ATOM 23 C4 A B 557 -6.005 97.567 114.072 1.00 64.91 C
ATOM 24 P C B 558 -3.459 95.203 118.510 1.00 73.01 P
ATOM 25 OP1 C B 558 -2.582 94.771 119.630 1.00 74.50 O
ATOM 26 OP2 C B 558 -4.578 94.326 118.077 1.00 73.30 O
ATOM 27 O5' C B 558 -4.014 96.646 118.883 1.00 71.59 O
TER
Atoms:
OP1: (-11.317,86.047,109.557)
OP2: (-9.108,85.082,110.449)
C3': (-7.915,88.675,106.400)
C1': (-5.694,88.984,107.132)
C5': (-7.859,86.642,108.028)
O6: (-0.151,87.560,108.876)
O4': (-6.475,88.627,108.254)
C8: (-3.869,87.234,106.779)
C2: (-2.388,90.244,109.577)
C6: (-1.186,88.240,108.818)
C5: (-2.353,87.998,108.061)
C4: (-3.394,88.893,108.146)
P: (-9.843,86.128,109.686)
C4': (-7.765,88.142,107.816)
C2': (-6.480,88.556,105.889)
O2': (-6.185,89.382,104.781)
N1: (-1.296,89.412,109.566)
N2: (-2.304,91.334,110.357)
N3: (-3.479,90.027,108.875)
N7: (-2.664,86.958,107.195)
N9: (-4.374,88.391,107.328)
O5': (-9.231,86.245,108.219)
O3': (-8.336,90.037,106.548)
OP2: (-9.108,85.082,110.449)
C3': (-7.915,88.675,106.400)
C1': (-5.694,88.984,107.132)
C5': (-7.859,86.642,108.028)
O6: (-0.151,87.560,108.876)
O4': (-6.475,88.627,108.254)
C8: (-3.869,87.234,106.779)
C2: (-2.388,90.244,109.577)
C6: (-1.186,88.240,108.818)
C5: (-2.353,87.998,108.061)
C4: (-3.394,88.893,108.146)
P: (-9.843,86.128,109.686)
C4': (-7.765,88.142,107.816)
C2': (-6.480,88.556,105.889)
O2': (-6.185,89.382,104.781)
N1: (-1.296,89.412,109.566)
N2: (-2.304,91.334,110.357)
N3: (-3.479,90.027,108.875)
N7: (-2.664,86.958,107.195)
N9: (-4.374,88.391,107.328)
O5': (-9.231,86.245,108.219)
O3': (-8.336,90.037,106.548)
OP1: (0.235,93.251,114.357)
OP2: (-0.349,91.825,112.298)
C3': (-3.134,95.761,115.973)
C1': (-3.506,97.140,114.116)
C5': (-2.544,93.791,114.486)
O4': (-2.683,96.070,113.676)
C8: (-5.364,95.692,113.126)
O2': (-2.182,98.044,115.916)
C6: (-8.353,97.408,113.773)
C5: (-7.085,96.848,113.590)
C4: (-6.005,97.567,114.072)
P: (-0.442,93.113,113.043)
C4': (-2.314,95.241,114.809)
C2': (-3.304,97.235,115.629)
C2: (-7.295,99.183,114.820)
N1: (-8.430,98.601,114.409)
N3: (-6.043,98.758,114.701)
N6: (-9.477,96.830,113.350)
N7: (-6.667,95.666,112.994)
N9: (-4.893,96.811,113.778)
O5': (-1.985,93.478,113.202)
O3': (-2.530,95.487,117.229)
OP2: (-0.349,91.825,112.298)
C3': (-3.134,95.761,115.973)
C1': (-3.506,97.140,114.116)
C5': (-2.544,93.791,114.486)
O4': (-2.683,96.070,113.676)
C8: (-5.364,95.692,113.126)
O2': (-2.182,98.044,115.916)
C6: (-8.353,97.408,113.773)
C5: (-7.085,96.848,113.590)
C4: (-6.005,97.567,114.072)
P: (-0.442,93.113,113.043)
C4': (-2.314,95.241,114.809)
C2': (-3.304,97.235,115.629)
C2: (-7.295,99.183,114.820)
N1: (-8.430,98.601,114.409)
N3: (-6.043,98.758,114.701)
N6: (-9.477,96.830,113.350)
N7: (-6.667,95.666,112.994)
N9: (-4.893,96.811,113.778)
O5': (-1.985,93.478,113.202)
O3': (-2.530,95.487,117.229)
Image (generated by PyMOL):