Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A942:A1337
Extra
PDB:
ATOM 1 O3' U A 941 -133.045 24.461 10.669 1.00 22.09 O
ATOM 2 P G A 942 -132.956 22.967 11.256 1.00 17.00 P
ATOM 3 OP1 G A 942 -133.605 22.061 10.246 1.00 17.00 O
ATOM 4 OP2 G A 942 -133.492 22.996 12.654 1.00 17.00 O
ATOM 5 O5' G A 942 -131.386 22.716 11.281 1.00 17.00 O
ATOM 6 C5' G A 942 -130.683 22.494 10.076 1.00 17.00 C
ATOM 7 C4' G A 942 -129.354 21.888 10.348 1.00 17.00 C
ATOM 8 O4' G A 942 -128.510 22.864 10.999 1.00 17.00 O
ATOM 9 C3' G A 942 -129.373 20.716 11.309 1.00 17.00 C
ATOM 10 O3' G A 942 -129.735 19.490 10.685 1.00 17.00 O
ATOM 11 C2' G A 942 -127.964 20.738 11.887 1.00 17.00 C
ATOM 12 O2' G A 942 -127.033 20.161 10.982 1.00 17.00 O
ATOM 13 C1' G A 942 -127.711 22.241 11.975 1.00 17.00 C
ATOM 14 N9 G A 942 -128.099 22.785 13.276 1.00 17.16 N
ATOM 15 C8 G A 942 -129.350 23.228 13.596 1.00 17.16 C
ATOM 16 N7 G A 942 -129.438 23.674 14.820 1.00 17.16 N
ATOM 17 C5 G A 942 -128.164 23.517 15.331 1.00 17.16 C
ATOM 18 C6 G A 942 -127.646 23.830 16.618 1.00 17.16 C
ATOM 19 O6 G A 942 -128.228 24.332 17.599 1.00 17.16 O
ATOM 20 N1 G A 942 -126.289 23.508 16.717 1.00 17.16 N
ATOM 21 C2 G A 942 -125.527 22.968 15.712 1.00 17.16 C
ATOM 22 N2 G A 942 -124.247 22.753 16.034 1.00 17.16 N
ATOM 23 N3 G A 942 -125.997 22.667 14.503 1.00 17.16 N
ATOM 24 C4 G A 942 -127.317 22.969 14.385 1.00 17.16 C
ATOM 25 P G A 943 -131.156 18.820 11.010 1.00 27.96 P
ATOM 26 OP1 G A 943 -131.160 17.483 10.373 1.00 27.96 O
ATOM 27 OP2 G A 943 -132.208 19.797 10.628 1.00 27.96 O
ATOM 28 O5' G A 943 -131.100 18.660 12.585 1.00 27.96 O
TER
ATOM 1 O3' G B1336 -121.064 20.978 19.380 1.00 19.49 O
ATOM 2 P A B1337 -120.656 22.387 18.728 1.00 27.41 P
ATOM 3 OP1 A B1337 -119.921 23.142 19.776 1.00 27.41 O
ATOM 4 OP2 A B1337 -121.887 22.987 18.143 1.00 27.41 O
ATOM 5 O5' A B1337 -119.653 21.958 17.562 1.00 27.41 O
ATOM 6 C5' A B1337 -118.548 21.102 17.820 1.00 27.41 C
ATOM 7 C4' A B1337 -118.066 20.428 16.555 1.00 27.41 C
ATOM 8 O4' A B1337 -119.087 19.515 16.072 1.00 27.41 O
ATOM 9 C3' A B1337 -117.798 21.350 15.370 1.00 27.41 C
ATOM 10 O3' A B1337 -116.516 21.972 15.413 1.00 27.41 O
ATOM 11 C2' A B1337 -118.005 20.431 14.169 1.00 27.41 C
ATOM 12 O2' A B1337 -116.860 19.635 13.924 1.00 27.41 O
ATOM 13 C1' A B1337 -119.130 19.528 14.661 1.00 27.41 C
ATOM 14 N9 A B1337 -120.451 20.020 14.229 1.00 27.16 N
ATOM 15 C8 A B1337 -121.095 21.173 14.600 1.00 27.16 C
ATOM 16 N7 A B1337 -122.252 21.346 14.011 1.00 27.16 N
ATOM 17 C5 A B1337 -122.373 20.233 13.197 1.00 27.16 C
ATOM 18 C6 A B1337 -123.373 19.811 12.307 1.00 27.16 C
ATOM 19 N6 A B1337 -124.500 20.490 12.095 1.00 27.16 N
ATOM 20 N1 A B1337 -123.192 18.650 11.629 1.00 27.16 N
ATOM 21 C2 A B1337 -122.074 17.955 11.843 1.00 27.16 C
ATOM 22 N3 A B1337 -121.065 18.253 12.662 1.00 27.16 N
ATOM 23 C4 A B1337 -121.272 19.415 13.315 1.00 27.16 C
ATOM 24 P A B1338 -116.376 23.567 15.169 1.00 15.59 P
ATOM 25 OP1 A B1338 -115.029 23.811 14.571 1.00 15.59 O
ATOM 26 OP2 A B1338 -116.720 24.243 16.453 1.00 15.59 O
ATOM 27 O5' A B1338 -117.510 23.846 14.086 1.00 15.59 O
TER
ATOM 2 P G A 942 -132.956 22.967 11.256 1.00 17.00 P
ATOM 3 OP1 G A 942 -133.605 22.061 10.246 1.00 17.00 O
ATOM 4 OP2 G A 942 -133.492 22.996 12.654 1.00 17.00 O
ATOM 5 O5' G A 942 -131.386 22.716 11.281 1.00 17.00 O
ATOM 6 C5' G A 942 -130.683 22.494 10.076 1.00 17.00 C
ATOM 7 C4' G A 942 -129.354 21.888 10.348 1.00 17.00 C
ATOM 8 O4' G A 942 -128.510 22.864 10.999 1.00 17.00 O
ATOM 9 C3' G A 942 -129.373 20.716 11.309 1.00 17.00 C
ATOM 10 O3' G A 942 -129.735 19.490 10.685 1.00 17.00 O
ATOM 11 C2' G A 942 -127.964 20.738 11.887 1.00 17.00 C
ATOM 12 O2' G A 942 -127.033 20.161 10.982 1.00 17.00 O
ATOM 13 C1' G A 942 -127.711 22.241 11.975 1.00 17.00 C
ATOM 14 N9 G A 942 -128.099 22.785 13.276 1.00 17.16 N
ATOM 15 C8 G A 942 -129.350 23.228 13.596 1.00 17.16 C
ATOM 16 N7 G A 942 -129.438 23.674 14.820 1.00 17.16 N
ATOM 17 C5 G A 942 -128.164 23.517 15.331 1.00 17.16 C
ATOM 18 C6 G A 942 -127.646 23.830 16.618 1.00 17.16 C
ATOM 19 O6 G A 942 -128.228 24.332 17.599 1.00 17.16 O
ATOM 20 N1 G A 942 -126.289 23.508 16.717 1.00 17.16 N
ATOM 21 C2 G A 942 -125.527 22.968 15.712 1.00 17.16 C
ATOM 22 N2 G A 942 -124.247 22.753 16.034 1.00 17.16 N
ATOM 23 N3 G A 942 -125.997 22.667 14.503 1.00 17.16 N
ATOM 24 C4 G A 942 -127.317 22.969 14.385 1.00 17.16 C
ATOM 25 P G A 943 -131.156 18.820 11.010 1.00 27.96 P
ATOM 26 OP1 G A 943 -131.160 17.483 10.373 1.00 27.96 O
ATOM 27 OP2 G A 943 -132.208 19.797 10.628 1.00 27.96 O
ATOM 28 O5' G A 943 -131.100 18.660 12.585 1.00 27.96 O
TER
ATOM 1 O3' G B1336 -121.064 20.978 19.380 1.00 19.49 O
ATOM 2 P A B1337 -120.656 22.387 18.728 1.00 27.41 P
ATOM 3 OP1 A B1337 -119.921 23.142 19.776 1.00 27.41 O
ATOM 4 OP2 A B1337 -121.887 22.987 18.143 1.00 27.41 O
ATOM 5 O5' A B1337 -119.653 21.958 17.562 1.00 27.41 O
ATOM 6 C5' A B1337 -118.548 21.102 17.820 1.00 27.41 C
ATOM 7 C4' A B1337 -118.066 20.428 16.555 1.00 27.41 C
ATOM 8 O4' A B1337 -119.087 19.515 16.072 1.00 27.41 O
ATOM 9 C3' A B1337 -117.798 21.350 15.370 1.00 27.41 C
ATOM 10 O3' A B1337 -116.516 21.972 15.413 1.00 27.41 O
ATOM 11 C2' A B1337 -118.005 20.431 14.169 1.00 27.41 C
ATOM 12 O2' A B1337 -116.860 19.635 13.924 1.00 27.41 O
ATOM 13 C1' A B1337 -119.130 19.528 14.661 1.00 27.41 C
ATOM 14 N9 A B1337 -120.451 20.020 14.229 1.00 27.16 N
ATOM 15 C8 A B1337 -121.095 21.173 14.600 1.00 27.16 C
ATOM 16 N7 A B1337 -122.252 21.346 14.011 1.00 27.16 N
ATOM 17 C5 A B1337 -122.373 20.233 13.197 1.00 27.16 C
ATOM 18 C6 A B1337 -123.373 19.811 12.307 1.00 27.16 C
ATOM 19 N6 A B1337 -124.500 20.490 12.095 1.00 27.16 N
ATOM 20 N1 A B1337 -123.192 18.650 11.629 1.00 27.16 N
ATOM 21 C2 A B1337 -122.074 17.955 11.843 1.00 27.16 C
ATOM 22 N3 A B1337 -121.065 18.253 12.662 1.00 27.16 N
ATOM 23 C4 A B1337 -121.272 19.415 13.315 1.00 27.16 C
ATOM 24 P A B1338 -116.376 23.567 15.169 1.00 15.59 P
ATOM 25 OP1 A B1338 -115.029 23.811 14.571 1.00 15.59 O
ATOM 26 OP2 A B1338 -116.720 24.243 16.453 1.00 15.59 O
ATOM 27 O5' A B1338 -117.510 23.846 14.086 1.00 15.59 O
TER
Atoms:
OP1: (-133.605,22.061,10.246)
OP2: (-133.492,22.996,12.654)
C3': (-129.373,20.716,11.309)
C1': (-127.711,22.241,11.975)
C5': (-130.683,22.494,10.076)
O6: (-128.228,24.332,17.599)
O4': (-128.510,22.864,10.999)
C8: (-129.350,23.228,13.596)
C2: (-125.527,22.968,15.712)
C6: (-127.646,23.830,16.618)
C5: (-128.164,23.517,15.331)
C4: (-127.317,22.969,14.385)
P: (-132.956,22.967,11.256)
C4': (-129.354,21.888,10.348)
C2': (-127.964,20.738,11.887)
O2': (-127.033,20.161,10.982)
N1: (-126.289,23.508,16.717)
N2: (-124.247,22.753,16.034)
N3: (-125.997,22.667,14.503)
N7: (-129.438,23.674,14.820)
N9: (-128.099,22.785,13.276)
O5': (-131.386,22.716,11.281)
O3': (-129.735,19.490,10.685)
OP2: (-133.492,22.996,12.654)
C3': (-129.373,20.716,11.309)
C1': (-127.711,22.241,11.975)
C5': (-130.683,22.494,10.076)
O6: (-128.228,24.332,17.599)
O4': (-128.510,22.864,10.999)
C8: (-129.350,23.228,13.596)
C2: (-125.527,22.968,15.712)
C6: (-127.646,23.830,16.618)
C5: (-128.164,23.517,15.331)
C4: (-127.317,22.969,14.385)
P: (-132.956,22.967,11.256)
C4': (-129.354,21.888,10.348)
C2': (-127.964,20.738,11.887)
O2': (-127.033,20.161,10.982)
N1: (-126.289,23.508,16.717)
N2: (-124.247,22.753,16.034)
N3: (-125.997,22.667,14.503)
N7: (-129.438,23.674,14.820)
N9: (-128.099,22.785,13.276)
O5': (-131.386,22.716,11.281)
O3': (-129.735,19.490,10.685)
OP1: (-119.921,23.142,19.776)
OP2: (-121.887,22.987,18.143)
C3': (-117.798,21.350,15.370)
C1': (-119.130,19.528,14.661)
C5': (-118.548,21.102,17.820)
O4': (-119.087,19.515,16.072)
C8: (-121.095,21.173,14.600)
O2': (-116.860,19.635,13.924)
C6: (-123.373,19.811,12.307)
C5: (-122.373,20.233,13.197)
C4: (-121.272,19.415,13.315)
P: (-120.656,22.387,18.728)
C4': (-118.066,20.428,16.555)
C2': (-118.005,20.431,14.169)
C2: (-122.074,17.955,11.843)
N1: (-123.192,18.650,11.629)
N3: (-121.065,18.253,12.662)
N6: (-124.500,20.490,12.095)
N7: (-122.252,21.346,14.011)
N9: (-120.451,20.020,14.229)
O5': (-119.653,21.958,17.562)
O3': (-116.516,21.972,15.413)
OP2: (-121.887,22.987,18.143)
C3': (-117.798,21.350,15.370)
C1': (-119.130,19.528,14.661)
C5': (-118.548,21.102,17.820)
O4': (-119.087,19.515,16.072)
C8: (-121.095,21.173,14.600)
O2': (-116.860,19.635,13.924)
C6: (-123.373,19.811,12.307)
C5: (-122.373,20.233,13.197)
C4: (-121.272,19.415,13.315)
P: (-120.656,22.387,18.728)
C4': (-118.066,20.428,16.555)
C2': (-118.005,20.431,14.169)
C2: (-122.074,17.955,11.843)
N1: (-123.192,18.650,11.629)
N3: (-121.065,18.253,12.662)
N6: (-124.500,20.490,12.095)
N7: (-122.252,21.346,14.011)
N9: (-120.451,20.020,14.229)
O5': (-119.653,21.958,17.562)
O3': (-116.516,21.972,15.413)
Image (generated by PyMOL):