Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A99:A55
Extra
PDB:
ATOM 1 O3' C A 98 2.268 39.284 106.227 1.00 29.93 O
ATOM 2 P G A 99 0.839 39.916 105.824 1.00 25.54 P
ATOM 3 OP1 G A 99 0.748 39.982 104.342 1.00 64.98 O
ATOM 4 OP2 G A 99 0.607 41.142 106.618 1.00 66.69 O
ATOM 5 O5' G A 99 -0.196 38.825 106.332 1.00 15.78 O
ATOM 6 C5' G A 99 -0.366 37.601 105.614 1.00 14.52 C
ATOM 7 C4' G A 99 -1.383 36.738 106.305 1.00 13.90 C
ATOM 8 O4' G A 99 -0.888 36.388 107.616 1.00 15.26 O
ATOM 9 C3' G A 99 -2.715 37.409 106.570 1.00 14.10 C
ATOM 10 O3' G A 99 -3.563 37.326 105.449 1.00 14.97 O
ATOM 11 C2' G A 99 -3.257 36.642 107.766 1.00 15.07 C
ATOM 12 O2' G A 99 -3.942 35.455 107.413 1.00 14.38 O
ATOM 13 C1' G A 99 -1.969 36.312 108.520 1.00 15.88 C
ATOM 14 N9 G A 99 -1.716 37.242 109.609 1.00 52.40 N
ATOM 15 C8 G A 99 -0.956 38.386 109.587 1.00 52.65 C
ATOM 16 N7 G A 99 -0.944 39.009 110.732 1.00 53.77 N
ATOM 17 C5 G A 99 -1.741 38.222 111.557 1.00 54.72 C
ATOM 18 C6 G A 99 -2.110 38.382 112.933 1.00 54.29 C
ATOM 19 O6 G A 99 -1.796 39.289 113.732 1.00 55.70 O
ATOM 20 N1 G A 99 -2.935 37.342 113.356 1.00 53.62 N
ATOM 21 C2 G A 99 -3.353 36.290 112.572 1.00 55.11 C
ATOM 22 N2 G A 99 -4.154 35.388 113.161 1.00 56.61 N
ATOM 23 N3 G A 99 -3.017 36.135 111.308 1.00 55.81 N
ATOM 24 C4 G A 99 -2.218 37.128 110.871 1.00 54.38 C
ATOM 25 P G A 100 -4.505 38.560 105.101 1.00 10.50 P
ATOM 26 OP1 G A 100 -5.403 38.126 104.010 1.00 43.71 O
ATOM 27 OP2 G A 100 -3.625 39.741 104.918 1.00 46.89 O
ATOM 28 O5' G A 100 -5.381 38.750 106.411 1.00 16.24 O
TER
ATOM 1 O3' A B 54 -6.192 31.768 116.091 1.00 2.42 O
ATOM 2 P A B 55 -4.800 32.486 115.753 1.00 31.97 P
ATOM 3 OP1 A B 55 -5.086 33.942 115.765 1.00 11.14 O
ATOM 4 OP2 A B 55 -4.114 31.884 114.579 1.00 11.14 O
ATOM 5 O5' A B 55 -3.921 32.137 117.028 1.00 32.74 O
ATOM 6 C5' A B 55 -4.268 31.025 117.869 1.00 32.21 C
ATOM 7 C4' A B 55 -3.100 30.660 118.736 1.00 31.53 C
ATOM 8 O4' A B 55 -1.995 30.341 117.848 1.00 31.40 O
ATOM 9 C3' A B 55 -2.614 31.775 119.650 1.00 32.79 C
ATOM 10 O3' A B 55 -2.425 31.325 121.010 1.00 34.53 O
ATOM 11 C2' A B 55 -1.448 32.398 118.879 1.00 31.81 C
ATOM 12 O2' A B 55 -0.433 33.006 119.644 1.00 32.35 O
ATOM 13 C1' A B 55 -0.926 31.232 118.047 1.00 31.59 C
ATOM 14 N9 A B 55 -0.523 31.694 116.730 1.00 8.78 N
ATOM 15 C8 A B 55 -1.332 32.309 115.815 1.00 7.43 C
ATOM 16 N7 A B 55 -0.711 32.674 114.721 1.00 7.13 N
ATOM 17 C5 A B 55 0.598 32.257 114.925 1.00 7.60 C
ATOM 18 C6 A B 55 1.762 32.362 114.132 1.00 8.74 C
ATOM 19 N6 A B 55 1.788 32.945 112.934 1.00 10.04 N
ATOM 20 N1 A B 55 2.906 31.842 114.623 1.00 9.16 N
ATOM 21 C2 A B 55 2.871 31.255 115.825 1.00 9.62 C
ATOM 22 N3 A B 55 1.840 31.099 116.666 1.00 8.49 N
ATOM 23 C4 A B 55 0.722 31.633 116.152 1.00 7.77 C
ATOM 24 P G B 56 -1.296 30.239 121.381 1.00 37.25 P
ATOM 25 OP1 G B 56 -1.317 30.080 122.852 1.00 56.36 O
ATOM 26 OP2 G B 56 -0.009 30.548 120.701 1.00 57.04 O
ATOM 27 O5' G B 56 -1.891 28.891 120.796 1.00 32.04 O
TER
ATOM 2 P G A 99 0.839 39.916 105.824 1.00 25.54 P
ATOM 3 OP1 G A 99 0.748 39.982 104.342 1.00 64.98 O
ATOM 4 OP2 G A 99 0.607 41.142 106.618 1.00 66.69 O
ATOM 5 O5' G A 99 -0.196 38.825 106.332 1.00 15.78 O
ATOM 6 C5' G A 99 -0.366 37.601 105.614 1.00 14.52 C
ATOM 7 C4' G A 99 -1.383 36.738 106.305 1.00 13.90 C
ATOM 8 O4' G A 99 -0.888 36.388 107.616 1.00 15.26 O
ATOM 9 C3' G A 99 -2.715 37.409 106.570 1.00 14.10 C
ATOM 10 O3' G A 99 -3.563 37.326 105.449 1.00 14.97 O
ATOM 11 C2' G A 99 -3.257 36.642 107.766 1.00 15.07 C
ATOM 12 O2' G A 99 -3.942 35.455 107.413 1.00 14.38 O
ATOM 13 C1' G A 99 -1.969 36.312 108.520 1.00 15.88 C
ATOM 14 N9 G A 99 -1.716 37.242 109.609 1.00 52.40 N
ATOM 15 C8 G A 99 -0.956 38.386 109.587 1.00 52.65 C
ATOM 16 N7 G A 99 -0.944 39.009 110.732 1.00 53.77 N
ATOM 17 C5 G A 99 -1.741 38.222 111.557 1.00 54.72 C
ATOM 18 C6 G A 99 -2.110 38.382 112.933 1.00 54.29 C
ATOM 19 O6 G A 99 -1.796 39.289 113.732 1.00 55.70 O
ATOM 20 N1 G A 99 -2.935 37.342 113.356 1.00 53.62 N
ATOM 21 C2 G A 99 -3.353 36.290 112.572 1.00 55.11 C
ATOM 22 N2 G A 99 -4.154 35.388 113.161 1.00 56.61 N
ATOM 23 N3 G A 99 -3.017 36.135 111.308 1.00 55.81 N
ATOM 24 C4 G A 99 -2.218 37.128 110.871 1.00 54.38 C
ATOM 25 P G A 100 -4.505 38.560 105.101 1.00 10.50 P
ATOM 26 OP1 G A 100 -5.403 38.126 104.010 1.00 43.71 O
ATOM 27 OP2 G A 100 -3.625 39.741 104.918 1.00 46.89 O
ATOM 28 O5' G A 100 -5.381 38.750 106.411 1.00 16.24 O
TER
ATOM 1 O3' A B 54 -6.192 31.768 116.091 1.00 2.42 O
ATOM 2 P A B 55 -4.800 32.486 115.753 1.00 31.97 P
ATOM 3 OP1 A B 55 -5.086 33.942 115.765 1.00 11.14 O
ATOM 4 OP2 A B 55 -4.114 31.884 114.579 1.00 11.14 O
ATOM 5 O5' A B 55 -3.921 32.137 117.028 1.00 32.74 O
ATOM 6 C5' A B 55 -4.268 31.025 117.869 1.00 32.21 C
ATOM 7 C4' A B 55 -3.100 30.660 118.736 1.00 31.53 C
ATOM 8 O4' A B 55 -1.995 30.341 117.848 1.00 31.40 O
ATOM 9 C3' A B 55 -2.614 31.775 119.650 1.00 32.79 C
ATOM 10 O3' A B 55 -2.425 31.325 121.010 1.00 34.53 O
ATOM 11 C2' A B 55 -1.448 32.398 118.879 1.00 31.81 C
ATOM 12 O2' A B 55 -0.433 33.006 119.644 1.00 32.35 O
ATOM 13 C1' A B 55 -0.926 31.232 118.047 1.00 31.59 C
ATOM 14 N9 A B 55 -0.523 31.694 116.730 1.00 8.78 N
ATOM 15 C8 A B 55 -1.332 32.309 115.815 1.00 7.43 C
ATOM 16 N7 A B 55 -0.711 32.674 114.721 1.00 7.13 N
ATOM 17 C5 A B 55 0.598 32.257 114.925 1.00 7.60 C
ATOM 18 C6 A B 55 1.762 32.362 114.132 1.00 8.74 C
ATOM 19 N6 A B 55 1.788 32.945 112.934 1.00 10.04 N
ATOM 20 N1 A B 55 2.906 31.842 114.623 1.00 9.16 N
ATOM 21 C2 A B 55 2.871 31.255 115.825 1.00 9.62 C
ATOM 22 N3 A B 55 1.840 31.099 116.666 1.00 8.49 N
ATOM 23 C4 A B 55 0.722 31.633 116.152 1.00 7.77 C
ATOM 24 P G B 56 -1.296 30.239 121.381 1.00 37.25 P
ATOM 25 OP1 G B 56 -1.317 30.080 122.852 1.00 56.36 O
ATOM 26 OP2 G B 56 -0.009 30.548 120.701 1.00 57.04 O
ATOM 27 O5' G B 56 -1.891 28.891 120.796 1.00 32.04 O
TER
Atoms:
OP1: (0.748,39.982,104.342)
OP2: (0.607,41.142,106.618)
C3': (-2.715,37.409,106.570)
C1': (-1.969,36.312,108.520)
C5': (-0.366,37.601,105.614)
O6: (-1.796,39.289,113.732)
O4': (-0.888,36.388,107.616)
C8: (-0.956,38.386,109.587)
C2: (-3.353,36.290,112.572)
C6: (-2.110,38.382,112.933)
C5: (-1.741,38.222,111.557)
C4: (-2.218,37.128,110.871)
P: (0.839,39.916,105.824)
C4': (-1.383,36.738,106.305)
C2': (-3.257,36.642,107.766)
O2': (-3.942,35.455,107.413)
N1: (-2.935,37.342,113.356)
N2: (-4.154,35.388,113.161)
N3: (-3.017,36.135,111.308)
N7: (-0.944,39.009,110.732)
N9: (-1.716,37.242,109.609)
O5': (-0.196,38.825,106.332)
O3': (-3.563,37.326,105.449)
OP2: (0.607,41.142,106.618)
C3': (-2.715,37.409,106.570)
C1': (-1.969,36.312,108.520)
C5': (-0.366,37.601,105.614)
O6: (-1.796,39.289,113.732)
O4': (-0.888,36.388,107.616)
C8: (-0.956,38.386,109.587)
C2: (-3.353,36.290,112.572)
C6: (-2.110,38.382,112.933)
C5: (-1.741,38.222,111.557)
C4: (-2.218,37.128,110.871)
P: (0.839,39.916,105.824)
C4': (-1.383,36.738,106.305)
C2': (-3.257,36.642,107.766)
O2': (-3.942,35.455,107.413)
N1: (-2.935,37.342,113.356)
N2: (-4.154,35.388,113.161)
N3: (-3.017,36.135,111.308)
N7: (-0.944,39.009,110.732)
N9: (-1.716,37.242,109.609)
O5': (-0.196,38.825,106.332)
O3': (-3.563,37.326,105.449)
OP1: (-5.086,33.942,115.765)
OP2: (-4.114,31.884,114.579)
C3': (-2.614,31.775,119.650)
C1': (-0.926,31.232,118.047)
C5': (-4.268,31.025,117.869)
O4': (-1.995,30.341,117.848)
C8: (-1.332,32.309,115.815)
O2': (-0.433,33.006,119.644)
C6: (1.762,32.362,114.132)
C5: (0.598,32.257,114.925)
C4: (0.722,31.633,116.152)
P: (-4.800,32.486,115.753)
C4': (-3.100,30.660,118.736)
C2': (-1.448,32.398,118.879)
C2: (2.871,31.255,115.825)
N1: (2.906,31.842,114.623)
N3: (1.840,31.099,116.666)
N6: (1.788,32.945,112.934)
N7: (-0.711,32.674,114.721)
N9: (-0.523,31.694,116.730)
O5': (-3.921,32.137,117.028)
O3': (-2.425,31.325,121.010)
OP2: (-4.114,31.884,114.579)
C3': (-2.614,31.775,119.650)
C1': (-0.926,31.232,118.047)
C5': (-4.268,31.025,117.869)
O4': (-1.995,30.341,117.848)
C8: (-1.332,32.309,115.815)
O2': (-0.433,33.006,119.644)
C6: (1.762,32.362,114.132)
C5: (0.598,32.257,114.925)
C4: (0.722,31.633,116.152)
P: (-4.800,32.486,115.753)
C4': (-3.100,30.660,118.736)
C2': (-1.448,32.398,118.879)
C2: (2.871,31.255,115.825)
N1: (2.906,31.842,114.623)
N3: (1.840,31.099,116.666)
N6: (1.788,32.945,112.934)
N7: (-0.711,32.674,114.721)
N9: (-0.523,31.694,116.730)
O5': (-3.921,32.137,117.028)
O3': (-2.425,31.325,121.010)
Image (generated by PyMOL):