Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2V:B27:B30
Extra
PDB:
ATOM 1 O3' U A 26 -3.741 41.785 5.792 1.00 31.28 O
ATOM 2 P G A 27 -4.807 42.790 6.445 1.00 40.24 P
ATOM 3 OP1 G A 27 -4.164 44.120 6.539 1.00 44.05 O
ATOM 4 OP2 G A 27 -5.374 42.157 7.654 1.00 37.92 O
ATOM 5 O5' G A 27 -5.957 42.885 5.340 1.00 40.01 O
ATOM 6 C5' G A 27 -5.697 43.522 4.099 1.00 36.13 C
ATOM 7 C4' G A 27 -6.823 43.238 3.126 1.00 37.83 C
ATOM 8 O4' G A 27 -6.924 41.806 2.896 1.00 34.99 O
ATOM 9 C3' G A 27 -8.210 43.621 3.617 1.00 38.26 C
ATOM 10 O3' G A 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 11 C2' G A 27 -9.060 42.793 2.663 1.00 37.21 C
ATOM 12 O2' G A 27 -9.112 43.353 1.368 1.00 37.02 O
ATOM 13 C1' G A 27 -8.281 41.479 2.650 1.00 36.23 C
ATOM 14 N9 G A 27 -8.763 40.567 3.680 1.00 36.28 N
ATOM 15 C8 G A 27 -8.402 40.537 5.005 1.00 39.19 C
ATOM 16 N7 G A 27 -9.018 39.611 5.688 1.00 43.15 N
ATOM 17 C5 G A 27 -9.845 38.993 4.756 1.00 39.79 C
ATOM 18 C6 G A 27 -10.753 37.919 4.909 1.00 41.82 C
ATOM 19 O6 G A 27 -11.016 37.277 5.934 1.00 39.22 O
ATOM 20 N1 G A 27 -11.390 37.606 3.709 1.00 37.96 N
ATOM 21 C2 G A 27 -11.175 38.251 2.514 1.00 36.77 C
ATOM 22 N2 G A 27 -11.881 37.813 1.461 1.00 37.65 N
ATOM 23 N3 G A 27 -10.328 39.257 2.359 1.00 39.82 N
ATOM 24 C4 G A 27 -9.701 39.573 3.517 1.00 38.10 C
ATOM 25 P A A 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 26 OP1 A A 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 27 OP2 A A 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 28 O5' A A 28 -10.846 45.461 4.077 1.00 37.00 O
TER
ATOM 1 O3' G B 29 -15.752 37.748 2.671 1.00 35.48 O
ATOM 2 P A B 30 -15.066 36.476 3.352 1.00 41.05 P
ATOM 3 OP1 A B 30 -16.142 35.511 3.667 1.00 37.29 O
ATOM 4 OP2 A B 30 -14.154 36.957 4.414 1.00 32.67 O
ATOM 5 O5' A B 30 -14.193 35.853 2.168 1.00 37.65 O
ATOM 6 C5' A B 30 -14.828 35.381 0.989 1.00 36.77 C
ATOM 7 C4' A B 30 -13.908 34.401 0.289 1.00 37.22 C
ATOM 8 O4' A B 30 -12.653 35.059 -0.023 1.00 33.47 O
ATOM 9 C3' A B 30 -13.546 33.182 1.134 1.00 34.02 C
ATOM 10 O3' A B 30 -13.877 31.980 0.448 1.00 41.85 O
ATOM 11 C2' A B 30 -12.042 33.307 1.358 1.00 37.40 C
ATOM 12 O2' A B 30 -11.390 32.050 1.388 1.00 43.32 O
ATOM 13 C1' A B 30 -11.634 34.096 0.123 1.00 36.78 C
ATOM 14 N9 A B 30 -10.338 34.753 0.254 1.00 34.45 N
ATOM 15 C8 A B 30 -9.715 35.122 1.411 1.00 33.89 C
ATOM 16 N7 A B 30 -8.547 35.689 1.223 1.00 35.69 N
ATOM 17 C5 A B 30 -8.395 35.694 -0.155 1.00 35.51 C
ATOM 18 C6 A B 30 -7.364 36.158 -0.998 1.00 32.06 C
ATOM 19 N6 A B 30 -6.245 36.734 -0.549 1.00 30.81 N
ATOM 20 N1 A B 30 -7.530 36.004 -2.329 1.00 31.52 N
ATOM 21 C2 A B 30 -8.650 35.424 -2.777 1.00 34.69 C
ATOM 22 N3 A B 30 -9.684 34.949 -2.084 1.00 33.39 N
ATOM 23 C4 A B 30 -9.491 35.116 -0.767 1.00 33.45 C
ATOM 24 P A B 31 -15.213 31.193 0.842 1.00 46.67 P
ATOM 25 OP1 A B 31 -15.294 31.172 2.320 1.00 41.91 O
ATOM 26 OP2 A B 31 -15.233 29.923 0.084 1.00 47.71 O
ATOM 27 O5' A B 31 -16.382 32.147 0.306 1.00 43.64 O
TER
ATOM 2 P G A 27 -4.807 42.790 6.445 1.00 40.24 P
ATOM 3 OP1 G A 27 -4.164 44.120 6.539 1.00 44.05 O
ATOM 4 OP2 G A 27 -5.374 42.157 7.654 1.00 37.92 O
ATOM 5 O5' G A 27 -5.957 42.885 5.340 1.00 40.01 O
ATOM 6 C5' G A 27 -5.697 43.522 4.099 1.00 36.13 C
ATOM 7 C4' G A 27 -6.823 43.238 3.126 1.00 37.83 C
ATOM 8 O4' G A 27 -6.924 41.806 2.896 1.00 34.99 O
ATOM 9 C3' G A 27 -8.210 43.621 3.617 1.00 38.26 C
ATOM 10 O3' G A 27 -8.447 45.020 3.464 1.00 38.61 O
ATOM 11 C2' G A 27 -9.060 42.793 2.663 1.00 37.21 C
ATOM 12 O2' G A 27 -9.112 43.353 1.368 1.00 37.02 O
ATOM 13 C1' G A 27 -8.281 41.479 2.650 1.00 36.23 C
ATOM 14 N9 G A 27 -8.763 40.567 3.680 1.00 36.28 N
ATOM 15 C8 G A 27 -8.402 40.537 5.005 1.00 39.19 C
ATOM 16 N7 G A 27 -9.018 39.611 5.688 1.00 43.15 N
ATOM 17 C5 G A 27 -9.845 38.993 4.756 1.00 39.79 C
ATOM 18 C6 G A 27 -10.753 37.919 4.909 1.00 41.82 C
ATOM 19 O6 G A 27 -11.016 37.277 5.934 1.00 39.22 O
ATOM 20 N1 G A 27 -11.390 37.606 3.709 1.00 37.96 N
ATOM 21 C2 G A 27 -11.175 38.251 2.514 1.00 36.77 C
ATOM 22 N2 G A 27 -11.881 37.813 1.461 1.00 37.65 N
ATOM 23 N3 G A 27 -10.328 39.257 2.359 1.00 39.82 N
ATOM 24 C4 G A 27 -9.701 39.573 3.517 1.00 38.10 C
ATOM 25 P A A 28 -9.352 45.792 4.538 1.00 40.94 P
ATOM 26 OP1 A A 28 -9.136 47.243 4.352 1.00 40.57 O
ATOM 27 OP2 A A 28 -9.118 45.166 5.859 1.00 38.27 O
ATOM 28 O5' A A 28 -10.846 45.461 4.077 1.00 37.00 O
TER
ATOM 1 O3' G B 29 -15.752 37.748 2.671 1.00 35.48 O
ATOM 2 P A B 30 -15.066 36.476 3.352 1.00 41.05 P
ATOM 3 OP1 A B 30 -16.142 35.511 3.667 1.00 37.29 O
ATOM 4 OP2 A B 30 -14.154 36.957 4.414 1.00 32.67 O
ATOM 5 O5' A B 30 -14.193 35.853 2.168 1.00 37.65 O
ATOM 6 C5' A B 30 -14.828 35.381 0.989 1.00 36.77 C
ATOM 7 C4' A B 30 -13.908 34.401 0.289 1.00 37.22 C
ATOM 8 O4' A B 30 -12.653 35.059 -0.023 1.00 33.47 O
ATOM 9 C3' A B 30 -13.546 33.182 1.134 1.00 34.02 C
ATOM 10 O3' A B 30 -13.877 31.980 0.448 1.00 41.85 O
ATOM 11 C2' A B 30 -12.042 33.307 1.358 1.00 37.40 C
ATOM 12 O2' A B 30 -11.390 32.050 1.388 1.00 43.32 O
ATOM 13 C1' A B 30 -11.634 34.096 0.123 1.00 36.78 C
ATOM 14 N9 A B 30 -10.338 34.753 0.254 1.00 34.45 N
ATOM 15 C8 A B 30 -9.715 35.122 1.411 1.00 33.89 C
ATOM 16 N7 A B 30 -8.547 35.689 1.223 1.00 35.69 N
ATOM 17 C5 A B 30 -8.395 35.694 -0.155 1.00 35.51 C
ATOM 18 C6 A B 30 -7.364 36.158 -0.998 1.00 32.06 C
ATOM 19 N6 A B 30 -6.245 36.734 -0.549 1.00 30.81 N
ATOM 20 N1 A B 30 -7.530 36.004 -2.329 1.00 31.52 N
ATOM 21 C2 A B 30 -8.650 35.424 -2.777 1.00 34.69 C
ATOM 22 N3 A B 30 -9.684 34.949 -2.084 1.00 33.39 N
ATOM 23 C4 A B 30 -9.491 35.116 -0.767 1.00 33.45 C
ATOM 24 P A B 31 -15.213 31.193 0.842 1.00 46.67 P
ATOM 25 OP1 A B 31 -15.294 31.172 2.320 1.00 41.91 O
ATOM 26 OP2 A B 31 -15.233 29.923 0.084 1.00 47.71 O
ATOM 27 O5' A B 31 -16.382 32.147 0.306 1.00 43.64 O
TER
Atoms:
OP1: (-4.164,44.120,6.539)
OP2: (-5.374,42.157,7.654)
C3': (-8.210,43.621,3.617)
C1': (-8.281,41.479,2.650)
C5': (-5.697,43.522,4.099)
O6: (-11.016,37.277,5.934)
O4': (-6.924,41.806,2.896)
C8: (-8.402,40.537,5.005)
C2: (-11.175,38.251,2.514)
C6: (-10.753,37.919,4.909)
C5: (-9.845,38.993,4.756)
C4: (-9.701,39.573,3.517)
P: (-4.807,42.790,6.445)
C4': (-6.823,43.238,3.126)
C2': (-9.060,42.793,2.663)
O2': (-9.112,43.353,1.368)
N1: (-11.390,37.606,3.709)
N2: (-11.881,37.813,1.461)
N3: (-10.328,39.257,2.359)
N7: (-9.018,39.611,5.688)
N9: (-8.763,40.567,3.680)
O5': (-5.957,42.885,5.340)
O3': (-8.447,45.020,3.464)
OP2: (-5.374,42.157,7.654)
C3': (-8.210,43.621,3.617)
C1': (-8.281,41.479,2.650)
C5': (-5.697,43.522,4.099)
O6: (-11.016,37.277,5.934)
O4': (-6.924,41.806,2.896)
C8: (-8.402,40.537,5.005)
C2: (-11.175,38.251,2.514)
C6: (-10.753,37.919,4.909)
C5: (-9.845,38.993,4.756)
C4: (-9.701,39.573,3.517)
P: (-4.807,42.790,6.445)
C4': (-6.823,43.238,3.126)
C2': (-9.060,42.793,2.663)
O2': (-9.112,43.353,1.368)
N1: (-11.390,37.606,3.709)
N2: (-11.881,37.813,1.461)
N3: (-10.328,39.257,2.359)
N7: (-9.018,39.611,5.688)
N9: (-8.763,40.567,3.680)
O5': (-5.957,42.885,5.340)
O3': (-8.447,45.020,3.464)
OP1: (-16.142,35.511,3.667)
OP2: (-14.154,36.957,4.414)
C3': (-13.546,33.182,1.134)
C1': (-11.634,34.096,0.123)
C5': (-14.828,35.381,0.989)
O4': (-12.653,35.059,-0.023)
C8: (-9.715,35.122,1.411)
O2': (-11.390,32.050,1.388)
C6: (-7.364,36.158,-0.998)
C5: (-8.395,35.694,-0.155)
C4: (-9.491,35.116,-0.767)
P: (-15.066,36.476,3.352)
C4': (-13.908,34.401,0.289)
C2': (-12.042,33.307,1.358)
C2: (-8.650,35.424,-2.777)
N1: (-7.530,36.004,-2.329)
N3: (-9.684,34.949,-2.084)
N6: (-6.245,36.734,-0.549)
N7: (-8.547,35.689,1.223)
N9: (-10.338,34.753,0.254)
O5': (-14.193,35.853,2.168)
O3': (-13.877,31.980,0.448)
OP2: (-14.154,36.957,4.414)
C3': (-13.546,33.182,1.134)
C1': (-11.634,34.096,0.123)
C5': (-14.828,35.381,0.989)
O4': (-12.653,35.059,-0.023)
C8: (-9.715,35.122,1.411)
O2': (-11.390,32.050,1.388)
C6: (-7.364,36.158,-0.998)
C5: (-8.395,35.694,-0.155)
C4: (-9.491,35.116,-0.767)
P: (-15.066,36.476,3.352)
C4': (-13.908,34.401,0.289)
C2': (-12.042,33.307,1.358)
C2: (-8.650,35.424,-2.777)
N1: (-7.530,36.004,-2.329)
N3: (-9.684,34.949,-2.084)
N6: (-6.245,36.734,-0.549)
N7: (-8.547,35.689,1.223)
N9: (-10.338,34.753,0.254)
O5': (-14.193,35.853,2.168)
O3': (-13.877,31.980,0.448)
Image (generated by PyMOL):