Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0565:0568
Extra
PDB:
ATOM 1 O3' C A 564 1.880 81.275 133.541 1.00 79.52 O
ATOM 2 P G A 565 2.513 81.774 134.925 1.00 79.31 P
ATOM 3 OP1 G A 565 3.201 80.609 135.540 1.00 79.71 O
ATOM 4 OP2 G A 565 1.466 82.508 135.692 1.00 77.69 O
ATOM 5 O5' G A 565 3.626 82.811 134.459 1.00 79.15 O
ATOM 6 C5' G A 565 4.703 82.391 133.598 1.00 77.06 C
ATOM 7 C4' G A 565 5.564 83.570 133.212 1.00 74.98 C
ATOM 8 O4' G A 565 4.834 84.465 132.325 1.00 74.46 O
ATOM 9 C3' G A 565 5.984 84.476 134.353 1.00 73.52 C
ATOM 10 O3' G A 565 7.029 83.925 135.145 1.00 70.91 O
ATOM 11 C2' G A 565 6.364 85.746 133.604 1.00 74.32 C
ATOM 12 O2' G A 565 7.606 85.643 132.933 1.00 74.71 O
ATOM 13 C1' G A 565 5.246 85.806 132.561 1.00 74.46 C
ATOM 14 N9 G A 565 4.098 86.572 133.042 1.00 74.47 N
ATOM 15 C8 G A 565 2.917 86.078 133.537 1.00 73.97 C
ATOM 16 N7 G A 565 2.087 87.013 133.913 1.00 74.52 N
ATOM 17 C5 G A 565 2.758 88.198 133.647 1.00 74.86 C
ATOM 18 C6 G A 565 2.361 89.544 133.854 1.00 75.22 C
ATOM 19 O6 G A 565 1.304 89.969 134.334 1.00 75.24 O
ATOM 20 N1 G A 565 3.346 90.438 133.440 1.00 75.71 N
ATOM 21 C2 G A 565 4.559 90.084 132.900 1.00 76.11 C
ATOM 22 N2 G A 565 5.378 91.094 132.558 1.00 75.10 N
ATOM 23 N3 G A 565 4.942 88.831 132.708 1.00 76.35 N
ATOM 24 C4 G A 565 3.998 87.946 133.102 1.00 75.12 C
ATOM 25 P C A 566 6.876 83.905 136.747 1.00 68.89 P
ATOM 26 OP1 C A 566 8.171 83.522 137.357 1.00 70.51 O
ATOM 27 OP2 C A 566 5.664 83.105 137.050 1.00 70.37 O
ATOM 28 O5' C A 566 6.592 85.427 137.129 1.00 66.56 O
TER
ATOM 1 O3' G B 567 6.500 94.231 135.031 1.00 54.68 O
ATOM 2 P A B 568 5.458 94.639 133.880 1.00 56.10 P
ATOM 3 OP1 A B 568 4.774 95.873 134.356 1.00 52.88 O
ATOM 4 OP2 A B 568 4.653 93.441 133.507 1.00 53.96 O
ATOM 5 O5' A B 568 6.375 95.023 132.634 1.00 56.75 O
ATOM 6 C5' A B 568 7.060 96.295 132.578 1.00 56.08 C
ATOM 7 C4' A B 568 8.138 96.268 131.520 1.00 54.62 C
ATOM 8 O4' A B 568 9.079 95.209 131.834 1.00 53.78 O
ATOM 9 C3' A B 568 7.683 95.956 130.101 1.00 54.29 C
ATOM 10 O3' A B 568 7.238 97.128 129.422 1.00 54.92 O
ATOM 11 C2' A B 568 8.965 95.436 129.465 1.00 54.27 C
ATOM 12 O2' A B 568 9.835 96.469 129.038 1.00 54.70 O
ATOM 13 C1' A B 568 9.597 94.670 130.632 1.00 53.63 C
ATOM 14 N9 A B 568 9.308 93.238 130.592 1.00 52.67 N
ATOM 15 C8 A B 568 8.109 92.598 130.792 1.00 53.58 C
ATOM 16 N7 A B 568 8.171 91.297 130.627 1.00 53.44 N
ATOM 17 C5 A B 568 9.504 91.065 130.313 1.00 51.64 C
ATOM 18 C6 A B 568 10.217 89.892 130.015 1.00 50.57 C
ATOM 19 N6 A B 568 9.671 88.675 129.985 1.00 49.97 N
ATOM 20 N1 A B 568 11.534 90.012 129.745 1.00 50.77 N
ATOM 21 C2 A B 568 12.088 91.224 129.774 1.00 50.49 C
ATOM 22 N3 A B 568 11.526 92.398 130.040 1.00 52.79 N
ATOM 23 C4 A B 568 10.216 92.249 130.302 1.00 52.33 C
ATOM 24 P G B 569 5.753 97.198 128.804 1.00 56.89 P
ATOM 25 OP1 G B 569 5.762 98.306 127.811 1.00 57.46 O
ATOM 26 OP2 G B 569 4.794 97.236 129.928 1.00 58.73 O
ATOM 27 O5' G B 569 5.539 95.821 128.026 1.00 56.21 O
TER
ATOM 2 P G A 565 2.513 81.774 134.925 1.00 79.31 P
ATOM 3 OP1 G A 565 3.201 80.609 135.540 1.00 79.71 O
ATOM 4 OP2 G A 565 1.466 82.508 135.692 1.00 77.69 O
ATOM 5 O5' G A 565 3.626 82.811 134.459 1.00 79.15 O
ATOM 6 C5' G A 565 4.703 82.391 133.598 1.00 77.06 C
ATOM 7 C4' G A 565 5.564 83.570 133.212 1.00 74.98 C
ATOM 8 O4' G A 565 4.834 84.465 132.325 1.00 74.46 O
ATOM 9 C3' G A 565 5.984 84.476 134.353 1.00 73.52 C
ATOM 10 O3' G A 565 7.029 83.925 135.145 1.00 70.91 O
ATOM 11 C2' G A 565 6.364 85.746 133.604 1.00 74.32 C
ATOM 12 O2' G A 565 7.606 85.643 132.933 1.00 74.71 O
ATOM 13 C1' G A 565 5.246 85.806 132.561 1.00 74.46 C
ATOM 14 N9 G A 565 4.098 86.572 133.042 1.00 74.47 N
ATOM 15 C8 G A 565 2.917 86.078 133.537 1.00 73.97 C
ATOM 16 N7 G A 565 2.087 87.013 133.913 1.00 74.52 N
ATOM 17 C5 G A 565 2.758 88.198 133.647 1.00 74.86 C
ATOM 18 C6 G A 565 2.361 89.544 133.854 1.00 75.22 C
ATOM 19 O6 G A 565 1.304 89.969 134.334 1.00 75.24 O
ATOM 20 N1 G A 565 3.346 90.438 133.440 1.00 75.71 N
ATOM 21 C2 G A 565 4.559 90.084 132.900 1.00 76.11 C
ATOM 22 N2 G A 565 5.378 91.094 132.558 1.00 75.10 N
ATOM 23 N3 G A 565 4.942 88.831 132.708 1.00 76.35 N
ATOM 24 C4 G A 565 3.998 87.946 133.102 1.00 75.12 C
ATOM 25 P C A 566 6.876 83.905 136.747 1.00 68.89 P
ATOM 26 OP1 C A 566 8.171 83.522 137.357 1.00 70.51 O
ATOM 27 OP2 C A 566 5.664 83.105 137.050 1.00 70.37 O
ATOM 28 O5' C A 566 6.592 85.427 137.129 1.00 66.56 O
TER
ATOM 1 O3' G B 567 6.500 94.231 135.031 1.00 54.68 O
ATOM 2 P A B 568 5.458 94.639 133.880 1.00 56.10 P
ATOM 3 OP1 A B 568 4.774 95.873 134.356 1.00 52.88 O
ATOM 4 OP2 A B 568 4.653 93.441 133.507 1.00 53.96 O
ATOM 5 O5' A B 568 6.375 95.023 132.634 1.00 56.75 O
ATOM 6 C5' A B 568 7.060 96.295 132.578 1.00 56.08 C
ATOM 7 C4' A B 568 8.138 96.268 131.520 1.00 54.62 C
ATOM 8 O4' A B 568 9.079 95.209 131.834 1.00 53.78 O
ATOM 9 C3' A B 568 7.683 95.956 130.101 1.00 54.29 C
ATOM 10 O3' A B 568 7.238 97.128 129.422 1.00 54.92 O
ATOM 11 C2' A B 568 8.965 95.436 129.465 1.00 54.27 C
ATOM 12 O2' A B 568 9.835 96.469 129.038 1.00 54.70 O
ATOM 13 C1' A B 568 9.597 94.670 130.632 1.00 53.63 C
ATOM 14 N9 A B 568 9.308 93.238 130.592 1.00 52.67 N
ATOM 15 C8 A B 568 8.109 92.598 130.792 1.00 53.58 C
ATOM 16 N7 A B 568 8.171 91.297 130.627 1.00 53.44 N
ATOM 17 C5 A B 568 9.504 91.065 130.313 1.00 51.64 C
ATOM 18 C6 A B 568 10.217 89.892 130.015 1.00 50.57 C
ATOM 19 N6 A B 568 9.671 88.675 129.985 1.00 49.97 N
ATOM 20 N1 A B 568 11.534 90.012 129.745 1.00 50.77 N
ATOM 21 C2 A B 568 12.088 91.224 129.774 1.00 50.49 C
ATOM 22 N3 A B 568 11.526 92.398 130.040 1.00 52.79 N
ATOM 23 C4 A B 568 10.216 92.249 130.302 1.00 52.33 C
ATOM 24 P G B 569 5.753 97.198 128.804 1.00 56.89 P
ATOM 25 OP1 G B 569 5.762 98.306 127.811 1.00 57.46 O
ATOM 26 OP2 G B 569 4.794 97.236 129.928 1.00 58.73 O
ATOM 27 O5' G B 569 5.539 95.821 128.026 1.00 56.21 O
TER
Atoms:
OP1: (3.201,80.609,135.540)
OP2: (1.466,82.508,135.692)
C3': (5.984,84.476,134.353)
C1': (5.246,85.806,132.561)
C5': (4.703,82.391,133.598)
O6: (1.304,89.969,134.334)
O4': (4.834,84.465,132.325)
C8: (2.917,86.078,133.537)
C2: (4.559,90.084,132.900)
C6: (2.361,89.544,133.854)
C5: (2.758,88.198,133.647)
C4: (3.998,87.946,133.102)
P: (2.513,81.774,134.925)
C4': (5.564,83.570,133.212)
C2': (6.364,85.746,133.604)
O2': (7.606,85.643,132.933)
N1: (3.346,90.438,133.440)
N2: (5.378,91.094,132.558)
N3: (4.942,88.831,132.708)
N7: (2.087,87.013,133.913)
N9: (4.098,86.572,133.042)
O5': (3.626,82.811,134.459)
O3': (7.029,83.925,135.145)
OP2: (1.466,82.508,135.692)
C3': (5.984,84.476,134.353)
C1': (5.246,85.806,132.561)
C5': (4.703,82.391,133.598)
O6: (1.304,89.969,134.334)
O4': (4.834,84.465,132.325)
C8: (2.917,86.078,133.537)
C2: (4.559,90.084,132.900)
C6: (2.361,89.544,133.854)
C5: (2.758,88.198,133.647)
C4: (3.998,87.946,133.102)
P: (2.513,81.774,134.925)
C4': (5.564,83.570,133.212)
C2': (6.364,85.746,133.604)
O2': (7.606,85.643,132.933)
N1: (3.346,90.438,133.440)
N2: (5.378,91.094,132.558)
N3: (4.942,88.831,132.708)
N7: (2.087,87.013,133.913)
N9: (4.098,86.572,133.042)
O5': (3.626,82.811,134.459)
O3': (7.029,83.925,135.145)
OP1: (4.774,95.873,134.356)
OP2: (4.653,93.441,133.507)
C3': (7.683,95.956,130.101)
C1': (9.597,94.670,130.632)
C5': (7.060,96.295,132.578)
O4': (9.079,95.209,131.834)
C8: (8.109,92.598,130.792)
O2': (9.835,96.469,129.038)
C6: (10.217,89.892,130.015)
C5: (9.504,91.065,130.313)
C4: (10.216,92.249,130.302)
P: (5.458,94.639,133.880)
C4': (8.138,96.268,131.520)
C2': (8.965,95.436,129.465)
C2: (12.088,91.224,129.774)
N1: (11.534,90.012,129.745)
N3: (11.526,92.398,130.040)
N6: (9.671,88.675,129.985)
N7: (8.171,91.297,130.627)
N9: (9.308,93.238,130.592)
O5': (6.375,95.023,132.634)
O3': (7.238,97.128,129.422)
OP2: (4.653,93.441,133.507)
C3': (7.683,95.956,130.101)
C1': (9.597,94.670,130.632)
C5': (7.060,96.295,132.578)
O4': (9.079,95.209,131.834)
C8: (8.109,92.598,130.792)
O2': (9.835,96.469,129.038)
C6: (10.217,89.892,130.015)
C5: (9.504,91.065,130.313)
C4: (10.216,92.249,130.302)
P: (5.458,94.639,133.880)
C4': (8.138,96.268,131.520)
C2': (8.965,95.436,129.465)
C2: (12.088,91.224,129.774)
N1: (11.534,90.012,129.745)
N3: (11.526,92.398,130.040)
N6: (9.671,88.675,129.985)
N7: (8.171,91.297,130.627)
N9: (9.308,93.238,130.592)
O5': (6.375,95.023,132.634)
O3': (7.238,97.128,129.422)
Image (generated by PyMOL):