Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1237:A1236
Extra
PDB:
ATOM 1 O3' A A1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 2 P U A1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 3 OP1 U A1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 4 OP2 U A1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 5 O5' U A1237 29.400 -77.823 1.194 1.00 36.97 O
ATOM 6 C5' U A1237 29.221 -76.423 1.363 1.00 30.34 C
ATOM 7 C4' U A1237 30.074 -75.650 0.411 1.00 30.41 C
ATOM 8 O4' U A1237 31.472 -75.899 0.730 1.00 34.29 O
ATOM 9 C3' U A1237 29.886 -76.025 -1.054 1.00 31.26 C
ATOM 10 O3' U A1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 11 C2' U A1237 31.094 -76.888 -1.354 1.00 34.61 C
ATOM 12 O2' U A1237 31.493 -76.871 -2.705 1.00 33.42 O
ATOM 13 C1' U A1237 32.157 -76.286 -0.433 1.00 33.84 C
ATOM 14 N1 U A1237 33.193 -77.250 -0.068 1.00 34.82 N
ATOM 15 C2 U A1237 34.482 -77.071 -0.529 1.00 32.92 C
ATOM 16 O2 U A1237 34.842 -76.109 -1.171 1.00 33.03 O
ATOM 17 N3 U A1237 35.357 -78.063 -0.218 1.00 24.77 N
ATOM 18 C4 U A1237 35.066 -79.188 0.467 1.00 26.92 C
ATOM 19 O4 U A1237 35.944 -79.989 0.666 1.00 35.24 O
ATOM 20 C5 U A1237 33.724 -79.303 0.919 1.00 40.01 C
ATOM 21 C6 U A1237 32.830 -78.358 0.634 1.00 36.59 C
ATOM 22 P C A1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 23 OP1 C A1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 24 OP2 C A1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 25 O5' C A1238 27.587 -74.721 -2.693 1.00 38.27 O
TER
ATOM 1 O3' A B1235 30.711 -82.846 2.477 1.00 57.00 O
ATOM 2 P A B1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 3 OP1 A B1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 4 OP2 A B1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 5 O5' A B1236 32.043 -81.818 4.279 1.00 32.66 O
ATOM 6 C5' A B1236 30.823 -81.200 4.610 1.00 33.00 C
ATOM 7 C4' A B1236 31.026 -79.764 4.985 1.00 37.14 C
ATOM 8 O4' A B1236 32.336 -79.593 5.558 1.00 36.74 O
ATOM 9 C3' A B1236 30.956 -78.774 3.837 1.00 40.46 C
ATOM 10 O3' A B1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 11 C2' A B1236 31.885 -77.642 4.266 1.00 32.97 C
ATOM 12 O2' A B1236 31.185 -76.691 5.050 1.00 33.37 O
ATOM 13 C1' A B1236 32.886 -78.361 5.163 1.00 34.87 C
ATOM 14 N9 A B1236 34.177 -78.609 4.491 1.00 38.48 N
ATOM 15 C8 A B1236 34.933 -79.764 4.489 1.00 36.22 C
ATOM 16 N7 A B1236 36.060 -79.675 3.829 1.00 28.30 N
ATOM 17 C5 A B1236 36.054 -78.364 3.381 1.00 30.83 C
ATOM 18 C6 A B1236 36.969 -77.621 2.611 1.00 33.96 C
ATOM 19 N6 A B1236 38.133 -78.077 2.135 1.00 31.52 N
ATOM 20 N1 A B1236 36.652 -76.345 2.328 1.00 38.82 N
ATOM 21 C2 A B1236 35.503 -75.855 2.810 1.00 40.52 C
ATOM 22 N3 A B1236 34.560 -76.441 3.541 1.00 38.19 N
ATOM 23 C4 A B1236 34.908 -77.702 3.790 1.00 34.11 C
ATOM 24 P U B1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 25 OP1 U B1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 26 OP2 U B1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 27 O5' U B1237 29.400 -77.823 1.194 1.00 36.97 O
TER
ATOM 2 P U A1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 3 OP1 U A1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 4 OP2 U A1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 5 O5' U A1237 29.400 -77.823 1.194 1.00 36.97 O
ATOM 6 C5' U A1237 29.221 -76.423 1.363 1.00 30.34 C
ATOM 7 C4' U A1237 30.074 -75.650 0.411 1.00 30.41 C
ATOM 8 O4' U A1237 31.472 -75.899 0.730 1.00 34.29 O
ATOM 9 C3' U A1237 29.886 -76.025 -1.054 1.00 31.26 C
ATOM 10 O3' U A1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 11 C2' U A1237 31.094 -76.888 -1.354 1.00 34.61 C
ATOM 12 O2' U A1237 31.493 -76.871 -2.705 1.00 33.42 O
ATOM 13 C1' U A1237 32.157 -76.286 -0.433 1.00 33.84 C
ATOM 14 N1 U A1237 33.193 -77.250 -0.068 1.00 34.82 N
ATOM 15 C2 U A1237 34.482 -77.071 -0.529 1.00 32.92 C
ATOM 16 O2 U A1237 34.842 -76.109 -1.171 1.00 33.03 O
ATOM 17 N3 U A1237 35.357 -78.063 -0.218 1.00 24.77 N
ATOM 18 C4 U A1237 35.066 -79.188 0.467 1.00 26.92 C
ATOM 19 O4 U A1237 35.944 -79.989 0.666 1.00 35.24 O
ATOM 20 C5 U A1237 33.724 -79.303 0.919 1.00 40.01 C
ATOM 21 C6 U A1237 32.830 -78.358 0.634 1.00 36.59 C
ATOM 22 P C A1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 23 OP1 C A1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 24 OP2 C A1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 25 O5' C A1238 27.587 -74.721 -2.693 1.00 38.27 O
TER
ATOM 1 O3' A B1235 30.711 -82.846 2.477 1.00 57.00 O
ATOM 2 P A B1236 32.060 -83.070 3.308 1.00 47.90 P
ATOM 3 OP1 A B1236 33.193 -82.960 2.323 1.00 39.30 O
ATOM 4 OP2 A B1236 31.908 -84.330 4.100 1.00 40.68 O
ATOM 5 O5' A B1236 32.043 -81.818 4.279 1.00 32.66 O
ATOM 6 C5' A B1236 30.823 -81.200 4.610 1.00 33.00 C
ATOM 7 C4' A B1236 31.026 -79.764 4.985 1.00 37.14 C
ATOM 8 O4' A B1236 32.336 -79.593 5.558 1.00 36.74 O
ATOM 9 C3' A B1236 30.956 -78.774 3.837 1.00 40.46 C
ATOM 10 O3' A B1236 29.624 -78.346 3.593 1.00 41.42 O
ATOM 11 C2' A B1236 31.885 -77.642 4.266 1.00 32.97 C
ATOM 12 O2' A B1236 31.185 -76.691 5.050 1.00 33.37 O
ATOM 13 C1' A B1236 32.886 -78.361 5.163 1.00 34.87 C
ATOM 14 N9 A B1236 34.177 -78.609 4.491 1.00 38.48 N
ATOM 15 C8 A B1236 34.933 -79.764 4.489 1.00 36.22 C
ATOM 16 N7 A B1236 36.060 -79.675 3.829 1.00 28.30 N
ATOM 17 C5 A B1236 36.054 -78.364 3.381 1.00 30.83 C
ATOM 18 C6 A B1236 36.969 -77.621 2.611 1.00 33.96 C
ATOM 19 N6 A B1236 38.133 -78.077 2.135 1.00 31.52 N
ATOM 20 N1 A B1236 36.652 -76.345 2.328 1.00 38.82 N
ATOM 21 C2 A B1236 35.503 -75.855 2.810 1.00 40.52 C
ATOM 22 N3 A B1236 34.560 -76.441 3.541 1.00 38.19 N
ATOM 23 C4 A B1236 34.908 -77.702 3.790 1.00 34.11 C
ATOM 24 P U B1237 28.845 -78.823 2.277 1.00 32.66 P
ATOM 25 OP1 U B1237 27.402 -78.560 2.503 1.00 48.77 O
ATOM 26 OP2 U B1237 29.285 -80.208 1.976 1.00 43.40 O
ATOM 27 O5' U B1237 29.400 -77.823 1.194 1.00 36.97 O
TER
Atoms:
C4: (35.066,-79.188,0.467)
N3: (35.357,-78.063,-0.218)
OP1: (27.402,-78.560,2.503)
OP2: (29.285,-80.208,1.976)
C2: (34.482,-77.071,-0.529)
C1': (32.157,-76.286,-0.433)
C3': (29.886,-76.025,-1.054)
O5': (29.400,-77.823,1.194)
O4': (31.472,-75.899,0.730)
C5': (29.221,-76.423,1.363)
P: (28.845,-78.823,2.277)
C4': (30.074,-75.650,0.411)
C2': (31.094,-76.888,-1.354)
O2': (31.493,-76.871,-2.705)
N1: (33.193,-77.250,-0.068)
O4: (35.944,-79.989,0.666)
O2: (34.842,-76.109,-1.171)
C6: (32.830,-78.358,0.634)
C5: (33.724,-79.303,0.919)
O3': (29.928,-74.864,-1.859)
N3: (35.357,-78.063,-0.218)
OP1: (27.402,-78.560,2.503)
OP2: (29.285,-80.208,1.976)
C2: (34.482,-77.071,-0.529)
C1': (32.157,-76.286,-0.433)
C3': (29.886,-76.025,-1.054)
O5': (29.400,-77.823,1.194)
O4': (31.472,-75.899,0.730)
C5': (29.221,-76.423,1.363)
P: (28.845,-78.823,2.277)
C4': (30.074,-75.650,0.411)
C2': (31.094,-76.888,-1.354)
O2': (31.493,-76.871,-2.705)
N1: (33.193,-77.250,-0.068)
O4: (35.944,-79.989,0.666)
O2: (34.842,-76.109,-1.171)
C6: (32.830,-78.358,0.634)
C5: (33.724,-79.303,0.919)
O3': (29.928,-74.864,-1.859)
OP1: (33.193,-82.960,2.323)
OP2: (31.908,-84.330,4.100)
C3': (30.956,-78.774,3.837)
C1': (32.886,-78.361,5.163)
C5': (30.823,-81.200,4.610)
O4': (32.336,-79.593,5.558)
C8: (34.933,-79.764,4.489)
O2': (31.185,-76.691,5.050)
C6: (36.969,-77.621,2.611)
C5: (36.054,-78.364,3.381)
C4: (34.908,-77.702,3.790)
P: (32.060,-83.070,3.308)
C4': (31.026,-79.764,4.985)
C2': (31.885,-77.642,4.266)
C2: (35.503,-75.855,2.810)
N1: (36.652,-76.345,2.328)
N3: (34.560,-76.441,3.541)
N6: (38.133,-78.077,2.135)
N7: (36.060,-79.675,3.829)
N9: (34.177,-78.609,4.491)
O5': (32.043,-81.818,4.279)
O3': (29.624,-78.346,3.593)
OP2: (31.908,-84.330,4.100)
C3': (30.956,-78.774,3.837)
C1': (32.886,-78.361,5.163)
C5': (30.823,-81.200,4.610)
O4': (32.336,-79.593,5.558)
C8: (34.933,-79.764,4.489)
O2': (31.185,-76.691,5.050)
C6: (36.969,-77.621,2.611)
C5: (36.054,-78.364,3.381)
C4: (34.908,-77.702,3.790)
P: (32.060,-83.070,3.308)
C4': (31.026,-79.764,4.985)
C2': (31.885,-77.642,4.266)
C2: (35.503,-75.855,2.810)
N1: (36.652,-76.345,2.328)
N3: (34.560,-76.441,3.541)
N6: (38.133,-78.077,2.135)
N7: (36.060,-79.675,3.829)
N9: (34.177,-78.609,4.491)
O5': (32.043,-81.818,4.279)
O3': (29.624,-78.346,3.593)
Image (generated by PyMOL):