Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A488:A1314
Extra
PDB:
ATOM 1 O3' G A 487 -19.254 -93.948 6.442 1.00 0.01 O
ATOM 2 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 3 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 4 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 5 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
ATOM 6 C5' G A 488 -16.061 -91.941 6.961 1.00 0.01 C
ATOM 7 C4' G A 488 -15.989 -90.785 7.888 1.00 0.01 C
ATOM 8 O4' G A 488 -17.077 -89.901 7.588 1.00 0.01 O
ATOM 9 C3' G A 488 -16.116 -91.146 9.353 1.00 0.01 C
ATOM 10 O3' G A 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 11 C2' G A 488 -17.562 -90.841 9.655 1.00 0.01 C
ATOM 12 O2' G A 488 -17.789 -90.511 10.990 1.00 0.01 O
ATOM 13 C1' G A 488 -17.815 -89.655 8.748 1.00 0.01 C
ATOM 14 N9 G A 488 -19.219 -89.456 8.371 1.00 0.01 N
ATOM 15 C8 G A 488 -19.966 -90.025 7.371 1.00 0.01 C
ATOM 16 N7 G A 488 -21.196 -89.578 7.323 1.00 0.01 N
ATOM 17 C5 G A 488 -21.267 -88.656 8.349 1.00 0.01 C
ATOM 18 C6 G A 488 -22.337 -87.845 8.816 1.00 0.01 C
ATOM 19 O6 G A 488 -23.514 -87.777 8.382 1.00 0.01 O
ATOM 20 N1 G A 488 -21.916 -87.060 9.905 1.00 0.01 N
ATOM 21 C2 G A 488 -20.639 -87.065 10.443 1.00 0.01 C
ATOM 22 N2 G A 488 -20.321 -86.278 11.493 1.00 0.01 N
ATOM 23 N3 G A 488 -19.679 -87.822 9.998 1.00 0.01 N
ATOM 24 C4 G A 488 -20.056 -88.573 8.974 1.00 0.01 C
ATOM 25 P C A 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 26 OP1 C A 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 27 OP2 C A 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 28 O5' C A 489 -13.840 -91.174 11.938 1.00 4.76 O
TER
ATOM 1 O3' C B1313 -23.442 -82.905 12.781 1.00 0.01 O
ATOM 2 P A B1314 -23.985 -84.149 11.964 1.00 0.01 P
ATOM 3 OP1 A B1314 -23.409 -85.373 12.578 1.00 0.01 O
ATOM 4 OP2 A B1314 -23.746 -83.875 10.542 1.00 0.01 O
ATOM 5 O5' A B1314 -25.526 -84.093 12.257 1.00 0.01 O
ATOM 6 C5' A B1314 -26.084 -83.069 13.045 1.00 0.01 C
ATOM 7 C4' A B1314 -27.065 -83.623 14.037 1.00 0.01 C
ATOM 8 O4' A B1314 -26.411 -83.790 15.307 1.00 0.01 O
ATOM 9 C3' A B1314 -28.270 -82.751 14.307 1.00 0.01 C
ATOM 10 O3' A B1314 -29.351 -83.094 13.481 1.00 0.01 O
ATOM 11 C2' A B1314 -28.558 -82.981 15.768 1.00 0.01 C
ATOM 12 O2' A B1314 -29.336 -84.140 15.921 1.00 0.01 O
ATOM 13 C1' A B1314 -27.178 -83.249 16.331 1.00 0.01 C
ATOM 14 N9 A B1314 -26.512 -82.019 16.786 1.00 0.01 N
ATOM 15 C8 A B1314 -25.409 -81.412 16.218 1.00 0.01 C
ATOM 16 N7 A B1314 -25.015 -80.310 16.806 1.00 0.01 N
ATOM 17 C5 A B1314 -25.928 -80.197 17.838 1.00 0.01 C
ATOM 18 C6 A B1314 -26.066 -79.220 18.830 1.00 0.01 C
ATOM 19 N6 A B1314 -25.233 -78.178 18.938 1.00 0.01 N
ATOM 20 N1 A B1314 -27.078 -79.368 19.712 1.00 0.01 N
ATOM 21 C2 A B1314 -27.884 -80.433 19.567 1.00 0.01 C
ATOM 22 N3 A B1314 -27.863 -81.420 18.668 1.00 0.01 N
ATOM 23 C4 A B1314 -26.842 -81.239 17.839 1.00 0.01 C
ATOM 24 P A B1315 -30.194 -81.971 12.751 1.00 0.01 P
ATOM 25 OP1 A B1315 -31.443 -82.593 12.340 1.00 0.01 O
ATOM 26 OP2 A B1315 -29.336 -81.373 11.726 1.00 0.01 O
ATOM 27 O5' A B1315 -30.474 -80.937 13.899 1.00 0.01 O
TER
ATOM 2 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 3 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 4 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 5 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
ATOM 6 C5' G A 488 -16.061 -91.941 6.961 1.00 0.01 C
ATOM 7 C4' G A 488 -15.989 -90.785 7.888 1.00 0.01 C
ATOM 8 O4' G A 488 -17.077 -89.901 7.588 1.00 0.01 O
ATOM 9 C3' G A 488 -16.116 -91.146 9.353 1.00 0.01 C
ATOM 10 O3' G A 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 11 C2' G A 488 -17.562 -90.841 9.655 1.00 0.01 C
ATOM 12 O2' G A 488 -17.789 -90.511 10.990 1.00 0.01 O
ATOM 13 C1' G A 488 -17.815 -89.655 8.748 1.00 0.01 C
ATOM 14 N9 G A 488 -19.219 -89.456 8.371 1.00 0.01 N
ATOM 15 C8 G A 488 -19.966 -90.025 7.371 1.00 0.01 C
ATOM 16 N7 G A 488 -21.196 -89.578 7.323 1.00 0.01 N
ATOM 17 C5 G A 488 -21.267 -88.656 8.349 1.00 0.01 C
ATOM 18 C6 G A 488 -22.337 -87.845 8.816 1.00 0.01 C
ATOM 19 O6 G A 488 -23.514 -87.777 8.382 1.00 0.01 O
ATOM 20 N1 G A 488 -21.916 -87.060 9.905 1.00 0.01 N
ATOM 21 C2 G A 488 -20.639 -87.065 10.443 1.00 0.01 C
ATOM 22 N2 G A 488 -20.321 -86.278 11.493 1.00 0.01 N
ATOM 23 N3 G A 488 -19.679 -87.822 9.998 1.00 0.01 N
ATOM 24 C4 G A 488 -20.056 -88.573 8.974 1.00 0.01 C
ATOM 25 P C A 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 26 OP1 C A 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 27 OP2 C A 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 28 O5' C A 489 -13.840 -91.174 11.938 1.00 4.76 O
TER
ATOM 1 O3' C B1313 -23.442 -82.905 12.781 1.00 0.01 O
ATOM 2 P A B1314 -23.985 -84.149 11.964 1.00 0.01 P
ATOM 3 OP1 A B1314 -23.409 -85.373 12.578 1.00 0.01 O
ATOM 4 OP2 A B1314 -23.746 -83.875 10.542 1.00 0.01 O
ATOM 5 O5' A B1314 -25.526 -84.093 12.257 1.00 0.01 O
ATOM 6 C5' A B1314 -26.084 -83.069 13.045 1.00 0.01 C
ATOM 7 C4' A B1314 -27.065 -83.623 14.037 1.00 0.01 C
ATOM 8 O4' A B1314 -26.411 -83.790 15.307 1.00 0.01 O
ATOM 9 C3' A B1314 -28.270 -82.751 14.307 1.00 0.01 C
ATOM 10 O3' A B1314 -29.351 -83.094 13.481 1.00 0.01 O
ATOM 11 C2' A B1314 -28.558 -82.981 15.768 1.00 0.01 C
ATOM 12 O2' A B1314 -29.336 -84.140 15.921 1.00 0.01 O
ATOM 13 C1' A B1314 -27.178 -83.249 16.331 1.00 0.01 C
ATOM 14 N9 A B1314 -26.512 -82.019 16.786 1.00 0.01 N
ATOM 15 C8 A B1314 -25.409 -81.412 16.218 1.00 0.01 C
ATOM 16 N7 A B1314 -25.015 -80.310 16.806 1.00 0.01 N
ATOM 17 C5 A B1314 -25.928 -80.197 17.838 1.00 0.01 C
ATOM 18 C6 A B1314 -26.066 -79.220 18.830 1.00 0.01 C
ATOM 19 N6 A B1314 -25.233 -78.178 18.938 1.00 0.01 N
ATOM 20 N1 A B1314 -27.078 -79.368 19.712 1.00 0.01 N
ATOM 21 C2 A B1314 -27.884 -80.433 19.567 1.00 0.01 C
ATOM 22 N3 A B1314 -27.863 -81.420 18.668 1.00 0.01 N
ATOM 23 C4 A B1314 -26.842 -81.239 17.839 1.00 0.01 C
ATOM 24 P A B1315 -30.194 -81.971 12.751 1.00 0.01 P
ATOM 25 OP1 A B1315 -31.443 -82.593 12.340 1.00 0.01 O
ATOM 26 OP2 A B1315 -29.336 -81.373 11.726 1.00 0.01 O
ATOM 27 O5' A B1315 -30.474 -80.937 13.899 1.00 0.01 O
TER
Atoms:
OP1: (-18.061,-92.557,4.761)
OP2: (-16.996,-94.671,5.674)
C3': (-16.116,-91.146,9.353)
C1': (-17.815,-89.655,8.748)
C5': (-16.061,-91.941,6.961)
O6: (-23.514,-87.777,8.382)
O4': (-17.077,-89.901,7.588)
C8: (-19.966,-90.025,7.371)
C2: (-20.639,-87.065,10.443)
C6: (-22.337,-87.845,8.816)
C5: (-21.267,-88.656,8.349)
C4: (-20.056,-88.573,8.974)
P: (-17.823,-93.465,5.897)
C4': (-15.989,-90.785,7.888)
C2': (-17.562,-90.841,9.655)
O2': (-17.789,-90.511,10.990)
N1: (-21.916,-87.060,9.905)
N2: (-20.321,-86.278,11.493)
N3: (-19.679,-87.822,9.998)
N7: (-21.196,-89.578,7.323)
N9: (-19.219,-89.456,8.371)
O5': (-17.267,-92.642,7.106)
O3': (-15.285,-90.293,10.122)
OP2: (-16.996,-94.671,5.674)
C3': (-16.116,-91.146,9.353)
C1': (-17.815,-89.655,8.748)
C5': (-16.061,-91.941,6.961)
O6: (-23.514,-87.777,8.382)
O4': (-17.077,-89.901,7.588)
C8: (-19.966,-90.025,7.371)
C2: (-20.639,-87.065,10.443)
C6: (-22.337,-87.845,8.816)
C5: (-21.267,-88.656,8.349)
C4: (-20.056,-88.573,8.974)
P: (-17.823,-93.465,5.897)
C4': (-15.989,-90.785,7.888)
C2': (-17.562,-90.841,9.655)
O2': (-17.789,-90.511,10.990)
N1: (-21.916,-87.060,9.905)
N2: (-20.321,-86.278,11.493)
N3: (-19.679,-87.822,9.998)
N7: (-21.196,-89.578,7.323)
N9: (-19.219,-89.456,8.371)
O5': (-17.267,-92.642,7.106)
O3': (-15.285,-90.293,10.122)
OP1: (-23.409,-85.373,12.578)
OP2: (-23.746,-83.875,10.542)
C3': (-28.270,-82.751,14.307)
C1': (-27.178,-83.249,16.331)
C5': (-26.084,-83.069,13.045)
O4': (-26.411,-83.790,15.307)
C8: (-25.409,-81.412,16.218)
O2': (-29.336,-84.140,15.921)
C6: (-26.066,-79.220,18.830)
C5: (-25.928,-80.197,17.838)
C4: (-26.842,-81.239,17.839)
P: (-23.985,-84.149,11.964)
C4': (-27.065,-83.623,14.037)
C2': (-28.558,-82.981,15.768)
C2: (-27.884,-80.433,19.567)
N1: (-27.078,-79.368,19.712)
N3: (-27.863,-81.420,18.668)
N6: (-25.233,-78.178,18.938)
N7: (-25.015,-80.310,16.806)
N9: (-26.512,-82.019,16.786)
O5': (-25.526,-84.093,12.257)
O3': (-29.351,-83.094,13.481)
OP2: (-23.746,-83.875,10.542)
C3': (-28.270,-82.751,14.307)
C1': (-27.178,-83.249,16.331)
C5': (-26.084,-83.069,13.045)
O4': (-26.411,-83.790,15.307)
C8: (-25.409,-81.412,16.218)
O2': (-29.336,-84.140,15.921)
C6: (-26.066,-79.220,18.830)
C5: (-25.928,-80.197,17.838)
C4: (-26.842,-81.239,17.839)
P: (-23.985,-84.149,11.964)
C4': (-27.065,-83.623,14.037)
C2': (-28.558,-82.981,15.768)
C2: (-27.884,-80.433,19.567)
N1: (-27.078,-79.368,19.712)
N3: (-27.863,-81.420,18.668)
N6: (-25.233,-78.178,18.938)
N7: (-25.015,-80.310,16.806)
N9: (-26.512,-82.019,16.786)
O5': (-25.526,-84.093,12.257)
O3': (-29.351,-83.094,13.481)
Image (generated by PyMOL):