Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0679:0682
Extra
PDB:
ATOM 1 O3' G A 678 57.421 69.119 49.720 1.00 41.40 O
ATOM 2 P G A 679 58.553 70.179 50.130 1.00 43.16 P
ATOM 3 OP1 G A 679 58.960 69.908 51.539 1.00 44.47 O
ATOM 4 OP2 G A 679 58.067 71.524 49.760 1.00 42.58 O
ATOM 5 O5' G A 679 59.776 69.800 49.183 1.00 43.52 O
ATOM 6 C5' G A 679 60.526 68.591 49.404 1.00 42.70 C
ATOM 7 C4' G A 679 61.627 68.464 48.385 1.00 43.62 C
ATOM 8 O4' G A 679 61.053 68.263 47.065 1.00 45.85 O
ATOM 9 C3' G A 679 62.478 69.702 48.205 1.00 43.10 C
ATOM 10 O3' G A 679 63.443 69.861 49.221 1.00 41.42 O
ATOM 11 C2' G A 679 63.068 69.490 46.820 1.00 43.69 C
ATOM 12 O2' G A 679 64.151 68.585 46.798 1.00 43.95 O
ATOM 13 C1' G A 679 61.866 68.896 46.088 1.00 45.06 C
ATOM 14 N9 G A 679 61.086 69.951 45.448 1.00 47.07 N
ATOM 15 C8 G A 679 59.985 70.609 45.948 1.00 46.35 C
ATOM 16 N7 G A 679 59.559 71.561 45.163 1.00 46.42 N
ATOM 17 C5 G A 679 60.420 71.519 44.073 1.00 47.76 C
ATOM 18 C6 G A 679 60.472 72.327 42.899 1.00 48.61 C
ATOM 19 O6 G A 679 59.749 73.292 42.585 1.00 47.20 O
ATOM 20 N1 G A 679 61.501 71.923 42.050 1.00 47.46 N
ATOM 21 C2 G A 679 62.370 70.887 42.297 1.00 47.05 C
ATOM 22 N2 G A 679 63.291 70.638 41.356 1.00 47.55 N
ATOM 23 N3 G A 679 62.340 70.144 43.386 1.00 47.49 N
ATOM 24 C4 G A 679 61.350 70.513 44.224 1.00 47.27 C
ATOM 25 P A A 680 63.723 71.327 49.797 1.00 41.08 P
ATOM 26 OP1 A A 680 64.768 71.228 50.836 1.00 42.43 O
ATOM 27 OP2 A A 680 62.407 71.924 50.127 1.00 39.24 O
ATOM 28 O5' A A 680 64.333 72.114 48.551 1.00 43.46 O
TER
ATOM 1 O3' A B 681 66.543 72.875 39.777 1.00 45.05 O
ATOM 2 P A B 682 65.520 72.319 38.668 1.00 45.96 P
ATOM 3 OP1 A B 682 65.623 73.252 37.520 1.00 46.93 O
ATOM 4 OP2 A B 682 64.198 72.078 39.292 1.00 41.22 O
ATOM 5 O5' A B 682 66.145 70.918 38.230 1.00 45.66 O
ATOM 6 C5' A B 682 67.383 70.855 37.491 1.00 46.32 C
ATOM 7 C4' A B 682 67.876 69.426 37.400 1.00 48.59 C
ATOM 8 O4' A B 682 68.146 68.928 38.739 1.00 49.73 O
ATOM 9 C3' A B 682 66.911 68.407 36.806 1.00 48.78 C
ATOM 10 O3' A B 682 66.954 68.380 35.380 1.00 48.58 O
ATOM 11 C2' A B 682 67.435 67.106 37.398 1.00 48.98 C
ATOM 12 O2' A B 682 68.584 66.632 36.729 1.00 49.60 O
ATOM 13 C1' A B 682 67.812 67.552 38.813 1.00 48.92 C
ATOM 14 N9 A B 682 66.683 67.408 39.729 1.00 48.48 N
ATOM 15 C8 A B 682 65.646 68.286 39.920 1.00 48.42 C
ATOM 16 N7 A B 682 64.747 67.866 40.772 1.00 49.45 N
ATOM 17 C5 A B 682 65.229 66.630 41.181 1.00 49.91 C
ATOM 18 C6 A B 682 64.727 65.669 42.080 1.00 50.49 C
ATOM 19 N6 A B 682 63.573 65.806 42.743 1.00 50.68 N
ATOM 20 N1 A B 682 65.457 64.548 42.271 1.00 49.58 N
ATOM 21 C2 A B 682 66.606 64.409 41.594 1.00 49.84 C
ATOM 22 N3 A B 682 67.177 65.236 40.718 1.00 49.35 N
ATOM 23 C4 A B 682 66.429 66.342 40.556 1.00 49.37 C
ATOM 24 P C B 683 65.586 68.422 34.526 1.00 50.50 P
ATOM 25 OP1 C B 683 65.968 68.077 33.132 1.00 51.59 O
ATOM 26 OP2 C B 683 64.858 69.691 34.789 1.00 48.77 O
ATOM 27 O5' C B 683 64.688 67.245 35.122 1.00 51.09 O
TER
ATOM 2 P G A 679 58.553 70.179 50.130 1.00 43.16 P
ATOM 3 OP1 G A 679 58.960 69.908 51.539 1.00 44.47 O
ATOM 4 OP2 G A 679 58.067 71.524 49.760 1.00 42.58 O
ATOM 5 O5' G A 679 59.776 69.800 49.183 1.00 43.52 O
ATOM 6 C5' G A 679 60.526 68.591 49.404 1.00 42.70 C
ATOM 7 C4' G A 679 61.627 68.464 48.385 1.00 43.62 C
ATOM 8 O4' G A 679 61.053 68.263 47.065 1.00 45.85 O
ATOM 9 C3' G A 679 62.478 69.702 48.205 1.00 43.10 C
ATOM 10 O3' G A 679 63.443 69.861 49.221 1.00 41.42 O
ATOM 11 C2' G A 679 63.068 69.490 46.820 1.00 43.69 C
ATOM 12 O2' G A 679 64.151 68.585 46.798 1.00 43.95 O
ATOM 13 C1' G A 679 61.866 68.896 46.088 1.00 45.06 C
ATOM 14 N9 G A 679 61.086 69.951 45.448 1.00 47.07 N
ATOM 15 C8 G A 679 59.985 70.609 45.948 1.00 46.35 C
ATOM 16 N7 G A 679 59.559 71.561 45.163 1.00 46.42 N
ATOM 17 C5 G A 679 60.420 71.519 44.073 1.00 47.76 C
ATOM 18 C6 G A 679 60.472 72.327 42.899 1.00 48.61 C
ATOM 19 O6 G A 679 59.749 73.292 42.585 1.00 47.20 O
ATOM 20 N1 G A 679 61.501 71.923 42.050 1.00 47.46 N
ATOM 21 C2 G A 679 62.370 70.887 42.297 1.00 47.05 C
ATOM 22 N2 G A 679 63.291 70.638 41.356 1.00 47.55 N
ATOM 23 N3 G A 679 62.340 70.144 43.386 1.00 47.49 N
ATOM 24 C4 G A 679 61.350 70.513 44.224 1.00 47.27 C
ATOM 25 P A A 680 63.723 71.327 49.797 1.00 41.08 P
ATOM 26 OP1 A A 680 64.768 71.228 50.836 1.00 42.43 O
ATOM 27 OP2 A A 680 62.407 71.924 50.127 1.00 39.24 O
ATOM 28 O5' A A 680 64.333 72.114 48.551 1.00 43.46 O
TER
ATOM 1 O3' A B 681 66.543 72.875 39.777 1.00 45.05 O
ATOM 2 P A B 682 65.520 72.319 38.668 1.00 45.96 P
ATOM 3 OP1 A B 682 65.623 73.252 37.520 1.00 46.93 O
ATOM 4 OP2 A B 682 64.198 72.078 39.292 1.00 41.22 O
ATOM 5 O5' A B 682 66.145 70.918 38.230 1.00 45.66 O
ATOM 6 C5' A B 682 67.383 70.855 37.491 1.00 46.32 C
ATOM 7 C4' A B 682 67.876 69.426 37.400 1.00 48.59 C
ATOM 8 O4' A B 682 68.146 68.928 38.739 1.00 49.73 O
ATOM 9 C3' A B 682 66.911 68.407 36.806 1.00 48.78 C
ATOM 10 O3' A B 682 66.954 68.380 35.380 1.00 48.58 O
ATOM 11 C2' A B 682 67.435 67.106 37.398 1.00 48.98 C
ATOM 12 O2' A B 682 68.584 66.632 36.729 1.00 49.60 O
ATOM 13 C1' A B 682 67.812 67.552 38.813 1.00 48.92 C
ATOM 14 N9 A B 682 66.683 67.408 39.729 1.00 48.48 N
ATOM 15 C8 A B 682 65.646 68.286 39.920 1.00 48.42 C
ATOM 16 N7 A B 682 64.747 67.866 40.772 1.00 49.45 N
ATOM 17 C5 A B 682 65.229 66.630 41.181 1.00 49.91 C
ATOM 18 C6 A B 682 64.727 65.669 42.080 1.00 50.49 C
ATOM 19 N6 A B 682 63.573 65.806 42.743 1.00 50.68 N
ATOM 20 N1 A B 682 65.457 64.548 42.271 1.00 49.58 N
ATOM 21 C2 A B 682 66.606 64.409 41.594 1.00 49.84 C
ATOM 22 N3 A B 682 67.177 65.236 40.718 1.00 49.35 N
ATOM 23 C4 A B 682 66.429 66.342 40.556 1.00 49.37 C
ATOM 24 P C B 683 65.586 68.422 34.526 1.00 50.50 P
ATOM 25 OP1 C B 683 65.968 68.077 33.132 1.00 51.59 O
ATOM 26 OP2 C B 683 64.858 69.691 34.789 1.00 48.77 O
ATOM 27 O5' C B 683 64.688 67.245 35.122 1.00 51.09 O
TER
Atoms:
OP1: (58.960,69.908,51.539)
OP2: (58.067,71.524,49.760)
C3': (62.478,69.702,48.205)
C1': (61.866,68.896,46.088)
C5': (60.526,68.591,49.404)
O6: (59.749,73.292,42.585)
O4': (61.053,68.263,47.065)
C8: (59.985,70.609,45.948)
C2: (62.370,70.887,42.297)
C6: (60.472,72.327,42.899)
C5: (60.420,71.519,44.073)
C4: (61.350,70.513,44.224)
P: (58.553,70.179,50.130)
C4': (61.627,68.464,48.385)
C2': (63.068,69.490,46.820)
O2': (64.151,68.585,46.798)
N1: (61.501,71.923,42.050)
N2: (63.291,70.638,41.356)
N3: (62.340,70.144,43.386)
N7: (59.559,71.561,45.163)
N9: (61.086,69.951,45.448)
O5': (59.776,69.800,49.183)
O3': (63.443,69.861,49.221)
OP2: (58.067,71.524,49.760)
C3': (62.478,69.702,48.205)
C1': (61.866,68.896,46.088)
C5': (60.526,68.591,49.404)
O6: (59.749,73.292,42.585)
O4': (61.053,68.263,47.065)
C8: (59.985,70.609,45.948)
C2: (62.370,70.887,42.297)
C6: (60.472,72.327,42.899)
C5: (60.420,71.519,44.073)
C4: (61.350,70.513,44.224)
P: (58.553,70.179,50.130)
C4': (61.627,68.464,48.385)
C2': (63.068,69.490,46.820)
O2': (64.151,68.585,46.798)
N1: (61.501,71.923,42.050)
N2: (63.291,70.638,41.356)
N3: (62.340,70.144,43.386)
N7: (59.559,71.561,45.163)
N9: (61.086,69.951,45.448)
O5': (59.776,69.800,49.183)
O3': (63.443,69.861,49.221)
OP1: (65.623,73.252,37.520)
OP2: (64.198,72.078,39.292)
C3': (66.911,68.407,36.806)
C1': (67.812,67.552,38.813)
C5': (67.383,70.855,37.491)
O4': (68.146,68.928,38.739)
C8: (65.646,68.286,39.920)
O2': (68.584,66.632,36.729)
C6: (64.727,65.669,42.080)
C5: (65.229,66.630,41.181)
C4: (66.429,66.342,40.556)
P: (65.520,72.319,38.668)
C4': (67.876,69.426,37.400)
C2': (67.435,67.106,37.398)
C2: (66.606,64.409,41.594)
N1: (65.457,64.548,42.271)
N3: (67.177,65.236,40.718)
N6: (63.573,65.806,42.743)
N7: (64.747,67.866,40.772)
N9: (66.683,67.408,39.729)
O5': (66.145,70.918,38.230)
O3': (66.954,68.380,35.380)
OP2: (64.198,72.078,39.292)
C3': (66.911,68.407,36.806)
C1': (67.812,67.552,38.813)
C5': (67.383,70.855,37.491)
O4': (68.146,68.928,38.739)
C8: (65.646,68.286,39.920)
O2': (68.584,66.632,36.729)
C6: (64.727,65.669,42.080)
C5: (65.229,66.630,41.181)
C4: (66.429,66.342,40.556)
P: (65.520,72.319,38.668)
C4': (67.876,69.426,37.400)
C2': (67.435,67.106,37.398)
C2: (66.606,64.409,41.594)
N1: (65.457,64.548,42.271)
N3: (67.177,65.236,40.718)
N6: (63.573,65.806,42.743)
N7: (64.747,67.866,40.772)
N9: (66.683,67.408,39.729)
O5': (66.145,70.918,38.230)
O3': (66.954,68.380,35.380)
Image (generated by PyMOL):