Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0274:0273
Extra
PDB:
ATOM 1 O3' A A 273 64.356 106.226 0.774 1.00111.83 O
ATOM 2 P U A 274 64.100 107.729 1.302 1.00110.20 P
ATOM 3 OP1 U A 274 63.340 107.652 2.579 1.00109.27 O
ATOM 4 OP2 U A 274 63.553 108.529 0.169 1.00108.90 O
ATOM 5 O5' U A 274 65.559 108.277 1.629 1.00107.03 O
ATOM 6 C5' U A 274 66.439 107.547 2.501 1.00103.07 C
ATOM 7 C4' U A 274 67.873 107.927 2.229 1.00100.82 C
ATOM 8 O4' U A 274 68.188 107.640 0.842 1.00 99.83 O
ATOM 9 C3' U A 274 68.195 109.402 2.384 1.00 99.74 C
ATOM 10 O3' U A 274 68.444 109.729 3.743 1.00 99.89 O
ATOM 11 C2' U A 274 69.430 109.556 1.504 1.00 99.38 C
ATOM 12 O2' U A 274 70.623 109.093 2.110 1.00 97.83 O
ATOM 13 C1' U A 274 69.073 108.631 0.337 1.00 98.73 C
ATOM 14 N1 U A 274 68.411 109.324 -0.782 1.00 96.76 N
ATOM 15 C2 U A 274 69.196 110.108 -1.615 1.00 95.85 C
ATOM 16 O2 U A 274 70.400 110.253 -1.455 1.00 93.86 O
ATOM 17 N3 U A 274 68.515 110.719 -2.641 1.00 95.85 N
ATOM 18 C4 U A 274 67.163 110.630 -2.914 1.00 95.97 C
ATOM 19 O4 U A 274 66.697 111.240 -3.877 1.00 96.49 O
ATOM 20 C5 U A 274 66.426 109.808 -2.009 1.00 95.93 C
ATOM 21 C6 U A 274 67.055 109.200 -1.002 1.00 96.14 C
ATOM 22 P C A 275 67.952 111.139 4.324 1.00 99.68 P
ATOM 23 OP1 C A 275 68.260 111.131 5.778 1.00 99.80 O
ATOM 24 OP2 C A 275 66.555 111.366 3.870 1.00 99.19 O
ATOM 25 O5' C A 275 68.905 112.204 3.616 1.00 99.95 O
TER
ATOM 1 O3' C B 272 61.556 107.116 -4.535 1.00133.51 O
ATOM 2 P A B 273 62.324 107.541 -3.185 1.00131.34 P
ATOM 3 OP1 A B 273 61.329 107.546 -2.077 1.00131.46 O
ATOM 4 OP2 A B 273 63.083 108.781 -3.501 1.00130.90 O
ATOM 5 O5' A B 273 63.387 106.378 -2.929 1.00127.56 O
ATOM 6 C5' A B 273 63.101 105.273 -2.048 1.00121.14 C
ATOM 7 C4' A B 273 64.347 104.889 -1.281 1.00116.44 C
ATOM 8 O4' A B 273 65.383 104.493 -2.224 1.00114.78 O
ATOM 9 C3' A B 273 64.990 106.018 -0.488 1.00113.97 C
ATOM 10 O3' A B 273 64.356 106.226 0.774 1.00111.83 O
ATOM 11 C2' A B 273 66.435 105.549 -0.377 1.00112.70 C
ATOM 12 O2' A B 273 66.623 104.553 0.609 1.00111.64 O
ATOM 13 C1' A B 273 66.653 104.939 -1.765 1.00111.99 C
ATOM 14 N9 A B 273 67.182 105.904 -2.736 1.00109.22 N
ATOM 15 C8 A B 273 66.487 106.592 -3.705 1.00108.25 C
ATOM 16 N7 A B 273 67.232 107.404 -4.415 1.00107.14 N
ATOM 17 C5 A B 273 68.505 107.239 -3.885 1.00106.53 C
ATOM 18 C6 A B 273 69.745 107.825 -4.200 1.00105.63 C
ATOM 19 N6 A B 273 69.915 108.730 -5.168 1.00104.56 N
ATOM 20 N1 A B 273 70.820 107.445 -3.476 1.00105.51 N
ATOM 21 C2 A B 273 70.651 106.538 -2.505 1.00105.60 C
ATOM 22 N3 A B 273 69.541 105.915 -2.116 1.00106.52 N
ATOM 23 C4 A B 273 68.490 106.315 -2.853 1.00107.24 C
ATOM 24 P U B 274 64.100 107.729 1.302 1.00110.20 P
ATOM 25 OP1 U B 274 63.340 107.652 2.579 1.00109.27 O
ATOM 26 OP2 U B 274 63.553 108.529 0.169 1.00108.90 O
ATOM 27 O5' U B 274 65.559 108.277 1.629 1.00107.03 O
TER
ATOM 2 P U A 274 64.100 107.729 1.302 1.00110.20 P
ATOM 3 OP1 U A 274 63.340 107.652 2.579 1.00109.27 O
ATOM 4 OP2 U A 274 63.553 108.529 0.169 1.00108.90 O
ATOM 5 O5' U A 274 65.559 108.277 1.629 1.00107.03 O
ATOM 6 C5' U A 274 66.439 107.547 2.501 1.00103.07 C
ATOM 7 C4' U A 274 67.873 107.927 2.229 1.00100.82 C
ATOM 8 O4' U A 274 68.188 107.640 0.842 1.00 99.83 O
ATOM 9 C3' U A 274 68.195 109.402 2.384 1.00 99.74 C
ATOM 10 O3' U A 274 68.444 109.729 3.743 1.00 99.89 O
ATOM 11 C2' U A 274 69.430 109.556 1.504 1.00 99.38 C
ATOM 12 O2' U A 274 70.623 109.093 2.110 1.00 97.83 O
ATOM 13 C1' U A 274 69.073 108.631 0.337 1.00 98.73 C
ATOM 14 N1 U A 274 68.411 109.324 -0.782 1.00 96.76 N
ATOM 15 C2 U A 274 69.196 110.108 -1.615 1.00 95.85 C
ATOM 16 O2 U A 274 70.400 110.253 -1.455 1.00 93.86 O
ATOM 17 N3 U A 274 68.515 110.719 -2.641 1.00 95.85 N
ATOM 18 C4 U A 274 67.163 110.630 -2.914 1.00 95.97 C
ATOM 19 O4 U A 274 66.697 111.240 -3.877 1.00 96.49 O
ATOM 20 C5 U A 274 66.426 109.808 -2.009 1.00 95.93 C
ATOM 21 C6 U A 274 67.055 109.200 -1.002 1.00 96.14 C
ATOM 22 P C A 275 67.952 111.139 4.324 1.00 99.68 P
ATOM 23 OP1 C A 275 68.260 111.131 5.778 1.00 99.80 O
ATOM 24 OP2 C A 275 66.555 111.366 3.870 1.00 99.19 O
ATOM 25 O5' C A 275 68.905 112.204 3.616 1.00 99.95 O
TER
ATOM 1 O3' C B 272 61.556 107.116 -4.535 1.00133.51 O
ATOM 2 P A B 273 62.324 107.541 -3.185 1.00131.34 P
ATOM 3 OP1 A B 273 61.329 107.546 -2.077 1.00131.46 O
ATOM 4 OP2 A B 273 63.083 108.781 -3.501 1.00130.90 O
ATOM 5 O5' A B 273 63.387 106.378 -2.929 1.00127.56 O
ATOM 6 C5' A B 273 63.101 105.273 -2.048 1.00121.14 C
ATOM 7 C4' A B 273 64.347 104.889 -1.281 1.00116.44 C
ATOM 8 O4' A B 273 65.383 104.493 -2.224 1.00114.78 O
ATOM 9 C3' A B 273 64.990 106.018 -0.488 1.00113.97 C
ATOM 10 O3' A B 273 64.356 106.226 0.774 1.00111.83 O
ATOM 11 C2' A B 273 66.435 105.549 -0.377 1.00112.70 C
ATOM 12 O2' A B 273 66.623 104.553 0.609 1.00111.64 O
ATOM 13 C1' A B 273 66.653 104.939 -1.765 1.00111.99 C
ATOM 14 N9 A B 273 67.182 105.904 -2.736 1.00109.22 N
ATOM 15 C8 A B 273 66.487 106.592 -3.705 1.00108.25 C
ATOM 16 N7 A B 273 67.232 107.404 -4.415 1.00107.14 N
ATOM 17 C5 A B 273 68.505 107.239 -3.885 1.00106.53 C
ATOM 18 C6 A B 273 69.745 107.825 -4.200 1.00105.63 C
ATOM 19 N6 A B 273 69.915 108.730 -5.168 1.00104.56 N
ATOM 20 N1 A B 273 70.820 107.445 -3.476 1.00105.51 N
ATOM 21 C2 A B 273 70.651 106.538 -2.505 1.00105.60 C
ATOM 22 N3 A B 273 69.541 105.915 -2.116 1.00106.52 N
ATOM 23 C4 A B 273 68.490 106.315 -2.853 1.00107.24 C
ATOM 24 P U B 274 64.100 107.729 1.302 1.00110.20 P
ATOM 25 OP1 U B 274 63.340 107.652 2.579 1.00109.27 O
ATOM 26 OP2 U B 274 63.553 108.529 0.169 1.00108.90 O
ATOM 27 O5' U B 274 65.559 108.277 1.629 1.00107.03 O
TER
Atoms:
C4: (67.163,110.630,-2.914)
N3: (68.515,110.719,-2.641)
OP1: (63.340,107.652,2.579)
OP2: (63.553,108.529,0.169)
C2: (69.196,110.108,-1.615)
C1': (69.073,108.631,0.337)
C3': (68.195,109.402,2.384)
O5': (65.559,108.277,1.629)
O4': (68.188,107.640,0.842)
C5': (66.439,107.547,2.501)
P: (64.100,107.729,1.302)
C4': (67.873,107.927,2.229)
C2': (69.430,109.556,1.504)
O2': (70.623,109.093,2.110)
N1: (68.411,109.324,-0.782)
O4: (66.697,111.240,-3.877)
O2: (70.400,110.253,-1.455)
C6: (67.055,109.200,-1.002)
C5: (66.426,109.808,-2.009)
O3': (68.444,109.729,3.743)
N3: (68.515,110.719,-2.641)
OP1: (63.340,107.652,2.579)
OP2: (63.553,108.529,0.169)
C2: (69.196,110.108,-1.615)
C1': (69.073,108.631,0.337)
C3': (68.195,109.402,2.384)
O5': (65.559,108.277,1.629)
O4': (68.188,107.640,0.842)
C5': (66.439,107.547,2.501)
P: (64.100,107.729,1.302)
C4': (67.873,107.927,2.229)
C2': (69.430,109.556,1.504)
O2': (70.623,109.093,2.110)
N1: (68.411,109.324,-0.782)
O4: (66.697,111.240,-3.877)
O2: (70.400,110.253,-1.455)
C6: (67.055,109.200,-1.002)
C5: (66.426,109.808,-2.009)
O3': (68.444,109.729,3.743)
OP1: (61.329,107.546,-2.077)
OP2: (63.083,108.781,-3.501)
C3': (64.990,106.018,-0.488)
C1': (66.653,104.939,-1.765)
C5': (63.101,105.273,-2.048)
O4': (65.383,104.493,-2.224)
C8: (66.487,106.592,-3.705)
O2': (66.623,104.553,0.609)
C6: (69.745,107.825,-4.200)
C5: (68.505,107.239,-3.885)
C4: (68.490,106.315,-2.853)
P: (62.324,107.541,-3.185)
C4': (64.347,104.889,-1.281)
C2': (66.435,105.549,-0.377)
C2: (70.651,106.538,-2.505)
N1: (70.820,107.445,-3.476)
N3: (69.541,105.915,-2.116)
N6: (69.915,108.730,-5.168)
N7: (67.232,107.404,-4.415)
N9: (67.182,105.904,-2.736)
O5': (63.387,106.378,-2.929)
O3': (64.356,106.226,0.774)
OP2: (63.083,108.781,-3.501)
C3': (64.990,106.018,-0.488)
C1': (66.653,104.939,-1.765)
C5': (63.101,105.273,-2.048)
O4': (65.383,104.493,-2.224)
C8: (66.487,106.592,-3.705)
O2': (66.623,104.553,0.609)
C6: (69.745,107.825,-4.200)
C5: (68.505,107.239,-3.885)
C4: (68.490,106.315,-2.853)
P: (62.324,107.541,-3.185)
C4': (64.347,104.889,-1.281)
C2': (66.435,105.549,-0.377)
C2: (70.651,106.538,-2.505)
N1: (70.820,107.445,-3.476)
N3: (69.541,105.915,-2.116)
N6: (69.915,108.730,-5.168)
N7: (67.232,107.404,-4.415)
N9: (67.182,105.904,-2.736)
O5': (63.387,106.378,-2.929)
O3': (64.356,106.226,0.774)
Image (generated by PyMOL):