ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IQN:A49:A52

Extra

PDB:
ATOM 1 O3' A A 48 47.783 66.037 47.205 1.00 57.17 O
ATOM 2 P G A 49 46.497 65.792 48.156 1.00 60.14 P
ATOM 3 OP1 G A 49 46.987 65.595 49.545 1.00 59.57 O
ATOM 4 OP2 G A 49 45.621 64.756 47.544 1.00 57.52 O
ATOM 5 O5' G A 49 45.735 67.189 48.100 1.00 61.31 O
ATOM 6 C5' G A 49 45.093 67.601 46.911 1.00 65.01 C
ATOM 7 C4' G A 49 44.854 69.087 46.917 1.00 68.32 C
ATOM 8 O4' G A 49 45.313 69.601 45.632 1.00 69.06 O
ATOM 9 C3' G A 49 43.377 69.476 47.015 1.00 70.28 C
ATOM 10 O3' G A 49 43.024 69.897 48.332 1.00 72.97 O
ATOM 11 C2' G A 49 43.257 70.613 46.008 1.00 69.46 C
ATOM 12 O2' G A 49 43.673 71.848 46.547 1.00 69.59 O
ATOM 13 C1' G A 49 44.218 70.139 44.918 1.00 68.98 C
ATOM 14 N9 G A 49 43.622 69.070 44.121 1.00 68.44 N
ATOM 15 C8 G A 49 43.833 67.718 44.252 1.00 68.70 C
ATOM 16 N7 G A 49 43.074 67.000 43.470 1.00 69.07 N
ATOM 17 C5 G A 49 42.338 67.933 42.757 1.00 68.66 C
ATOM 18 C6 G A 49 41.340 67.749 41.772 1.00 68.57 C
ATOM 19 O6 G A 49 40.880 66.689 41.330 1.00 69.59 O
ATOM 20 N1 G A 49 40.859 68.966 41.302 1.00 68.60 N
ATOM 21 C2 G A 49 41.279 70.201 41.732 1.00 67.89 C
ATOM 22 N2 G A 49 40.685 71.253 41.165 1.00 66.86 N
ATOM 23 N3 G A 49 42.207 70.387 42.653 1.00 68.11 N
ATOM 24 C4 G A 49 42.687 69.218 43.124 1.00 68.38 C
ATOM 25 P A A 50 42.232 68.887 49.313 1.00 75.41 P
ATOM 26 OP1 A A 50 42.606 69.229 50.712 1.00 75.35 O
ATOM 27 OP2 A A 50 42.432 67.497 48.819 1.00 74.05 O
ATOM 28 O5' A A 50 40.692 69.247 49.112 1.00 74.36 O
TER

ATOM 1 O3' A B 51 36.663 72.022 40.945 1.00 79.42 O
ATOM 2 P A B 52 37.265 71.744 39.486 1.00 80.49 P
ATOM 3 OP1 A B 52 36.116 71.630 38.557 1.00 79.57 O
ATOM 4 OP2 A B 52 38.223 70.609 39.614 1.00 80.11 O
ATOM 5 O5' A B 52 38.058 73.085 39.145 1.00 78.79 O
ATOM 6 C5' A B 52 37.409 74.147 38.462 1.00 77.44 C
ATOM 7 C4' A B 52 38.033 75.469 38.824 1.00 76.81 C
ATOM 8 O4' A B 52 38.442 75.441 40.217 1.00 76.30 O
ATOM 9 C3' A B 52 39.320 75.777 38.076 1.00 76.65 C
ATOM 10 O3' A B 52 39.043 76.369 36.817 1.00 75.98 O
ATOM 11 C2' A B 52 40.011 76.764 39.004 1.00 76.47 C
ATOM 12 O2' A B 52 39.556 78.091 38.833 1.00 75.51 O
ATOM 13 C1' A B 52 39.626 76.210 40.378 1.00 77.09 C
ATOM 14 N9 A B 52 40.666 75.355 40.942 1.00 77.92 N
ATOM 15 C8 A B 52 40.699 73.986 40.987 1.00 78.15 C
ATOM 16 N7 A B 52 41.784 73.500 41.540 1.00 78.07 N
ATOM 17 C5 A B 52 42.514 74.628 41.889 1.00 78.80 C
ATOM 18 C6 A B 52 43.766 74.793 42.514 1.00 79.41 C
ATOM 19 N6 A B 52 44.538 73.772 42.906 1.00 78.94 N
ATOM 20 N1 A B 52 44.203 76.058 42.724 1.00 79.15 N
ATOM 21 C2 A B 52 43.430 77.077 42.323 1.00 78.45 C
ATOM 22 N3 A B 52 42.241 77.048 41.721 1.00 78.28 N
ATOM 23 C4 A B 52 41.834 75.779 41.531 1.00 78.47 C
ATOM 24 P U B 53 39.145 75.476 35.486 1.00 75.16 P
ATOM 25 OP1 U B 53 39.426 76.391 34.352 1.00 74.94 O
ATOM 26 OP2 U B 53 37.959 74.583 35.436 1.00 75.06 O
ATOM 27 O5' U B 53 40.432 74.574 35.732 1.00 72.71 O
TER

Atoms:
OP1: (46.987,65.595,49.545)
OP2: (45.621,64.756,47.544)
C3': (43.377,69.476,47.015)
C1': (44.218,70.139,44.918)
C5': (45.093,67.601,46.911)
O6: (40.880,66.689,41.330)
O4': (45.313,69.601,45.632)
C8: (43.833,67.718,44.252)
C2: (41.279,70.201,41.732)
C6: (41.340,67.749,41.772)
C5: (42.338,67.933,42.757)
C4: (42.687,69.218,43.124)
P: (46.497,65.792,48.156)
C4': (44.854,69.087,46.917)
C2': (43.257,70.613,46.008)
O2': (43.673,71.848,46.547)
N1: (40.859,68.966,41.302)
N2: (40.685,71.253,41.165)
N3: (42.207,70.387,42.653)
N7: (43.074,67.000,43.470)
N9: (43.622,69.070,44.121)
O5': (45.735,67.189,48.100)
O3': (43.024,69.897,48.332)
OP1: (36.116,71.630,38.557)
OP2: (38.223,70.609,39.614)
C3': (39.320,75.777,38.076)
C1': (39.626,76.210,40.378)
C5': (37.409,74.147,38.462)
O4': (38.442,75.441,40.217)
C8: (40.699,73.986,40.987)
O2': (39.556,78.091,38.833)
C6: (43.766,74.793,42.514)
C5: (42.514,74.628,41.889)
C4: (41.834,75.779,41.531)
P: (37.265,71.744,39.486)
C4': (38.033,75.469,38.824)
C2': (40.011,76.764,39.004)
C2: (43.430,77.077,42.323)
N1: (44.203,76.058,42.724)
N3: (42.241,77.048,41.721)
N6: (44.538,73.772,42.906)
N7: (41.784,73.500,41.540)
N9: (40.666,75.355,40.942)
O5': (38.058,73.085,39.145)
O3': (39.043,76.369,36.817)
Image (generated by PyMOL):
PyMOL image
show in jmol